Cynoglossus semilaevis (tongue sole): 103394478
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Entry
103394478 CDS
T04866
Symbol
gtf2h4
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem03022
Basal transcription factors
csem03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103394478 (gtf2h4)
09124 Replication and repair
03420 Nucleotide excision repair
103394478 (gtf2h4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csem03021
]
103394478 (gtf2h4)
03400 DNA repair and recombination proteins [BR:
csem03400
]
103394478 (gtf2h4)
Transcription machinery [BR:
csem03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
103394478 (gtf2h4)
DNA repair and recombination proteins [BR:
csem03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
103394478 (gtf2h4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
103394478
NCBI-ProteinID:
XP_008330026
UniProt:
A0A3P8WS22
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All DBs
Position
18:11655137..11661940
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AA seq
461 aa
AA seq
DB search
MKLRVQLQCKNLHEYLRELSPDILDRLYNHPATCLAVYRELPSLAKTYVMRMLFLDQPLP
QAGVALWVKKDSQKDHDECVSMLTGLRLWHSQQLQGGLQGYILNLVFKDNLRIALLGGGK
AWADEGSALGPDRHARDIDSLDHYAMERWEVILHFMVGSTSAAVSQDLAQLLVQAGLMKS
ESGEAPYITSAGFQFLLLDTASQLWYITLQYLKTAQTRGMDLVEILSFLFQLSFSTLGRD
YSVEGMSESLLTFLQHLREFGLVFQRKRKSRRYYPTRLAINVAAGVTTSATNSSTSFTPT
GDAGYIIVETNYRVYAYTNSELQIALVALFSEMLYRFPNVVVAHVTRESVQQAISNGITA
QQIIHFLRTRAHPVLLKQTPVLPPTVTDQIRLWELERDRLQFTEGVLYNQFLSQADFEVL
RDRAQGLGCLVWQDVAHRVLVVTPQGHSEVKRFWKRQKSHT
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgaagctacgtgtccagttgcagtgcaaaaatctgcatgaatatttgagggagctgagt
cctgacattttggacagactctacaaccacccggcaacatgtctggctgtctacagagaa
ctcccttctctggccaaaacctatgtgatgcgtatgctttttctggaccagccactacca
caggctggagtggcattgtgggtaaagaaggacagccagaaggaccacgatgaatgtgtg
tcaatgctgaccggactcaggctctggcacagtcagcagctgcagggcggactgcaggga
tacatcctgaatctggtcttcaaggataaccttaggatcgctctgcttggcgggggcaaa
gcgtgggcggacgagggcagcgctctggggcctgatcgtcacgcgcgcgacattgacagt
ctcgaccactacgctatggagcgctgggaggtgattctgcacttcatggtgggatccacc
agtgctgccgtcagccaagatctggcacagctgctggttcaggccggactcatgaagagc
gagtccggagaagccccctacatcacctcagctggtttccagttcctgctgctggacact
gcttctcagctgtggtacatcacgctgcagtacctgaaaactgcgcagacccgagggatg
gacctggtggagatcttgtctttcttattccagctcagtttctctactttaggccgggat
tactccgtggagggcatgagtgagtccttactcactttcctgcagcacctgagggagttc
ggactggtcttccagcggaagagaaaatccagacgctattaccccaccagattggccatc
aatgtggctgcaggggtcacgaccagcgctaccaactccagtacgtcgttcactcccacc
ggagatgcaggctacattatagtggaaacaaattatcgcgtctacgcttacacaaactcg
gaactacaaattgctctggtggctctcttcagcgagatgctctaccgcttccccaacgtt
gtggtggctcatgtgacaagggagtccgttcaacaggccatctccaacggcatcactgca
cagcagatcattcactttctaaggacgagagctcacccagttttgctcaaacagactcca
gtgctgcctcccactgtcacagatcagatccgactgtgggagctggaaagagatcgactg
cagttcacagaaggcgtgctgtataaccagttcctctctcaggctgacttcgaggtgttg
agagacagagctcagggtctgggatgtctggtgtggcaggatgtcgcacacagggtgctg
gtggtgacgccgcagggacacagcgaggtcaagagattctggaaacgacaaaagtcgcac
acgtga
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