Cynoglossus semilaevis (tongue sole): 103394518
Help
Entry
103394518 CDS
T04866
Name
(RefSeq) sorting nexin-27-like
KO
K17936
sorting nexin-27
Organism
csem
Cynoglossus semilaevis (tongue sole)
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csem04131
]
103394518
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
csem04990
]
103394518
Membrane trafficking [BR:
csem04131
]
Protein recycling
Others
Others
103394518
Domain-containing proteins not elsewhere classified [BR:
csem04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
103394518
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
PDZ
PDZ_6
RA
SNX17-27-31_F1_FERM
RA_2
SNX17_FERM_C
PDZ_2
SNX17-31_F2_FERM
USP7_C2
DarA_N
Motif
Other DBs
NCBI-GeneID:
103394518
NCBI-ProteinID:
XP_008330085
UniProt:
A0A3P8VBX9
LinkDB
All DBs
Position
18:12618056..12631005
Genome browser
AA seq
556 aa
AA seq
DB search
MADVGDDEIRSALPSASRNGPVLGSSVATVMSGPRMVRIVKSESGYGFNVRGQVSEGGQL
RSINGELYAPLQHVSAVLPGGAADRAGISKGDRILEVNGVSVEGATHKQVVDLIRAGEKE
LVLAVLSVPPQEADGLEGGEDVQPNYDYSDKQAVPISIPTYKHVEQHSERFVVYNVYMSG
RQLCSKRYREFAILHQNLKREFSNFNFPKLPGKWPFSLSEQQLDARRRGLEEYLERVCSV
RVIGESDIMQEFLSESDENYNGVTDVELRIALPDKTTISVRVRKNSTTDQVYQALVMKVG
MDSIMASYFALFEVINHTFVRKLAPNEFPHKLYVQNYTSAVPGTCLALRKWLFSFQEEEL
LRDNPLVLHYCFHQALDDVKKGFIKTEDKSYQLQKLAEQRKMATYLSLLRTCEGYNEVVF
PHCSCDSRRKGHVITAISINHFKLHACTEDGTLENQVIAFEWAEMQRWDTDEEGMAFCFE
YARGEKKPRWVKIFTPYFNYMHECFERVFCELKWRKQVEEDASDKDNKNCSNNDFLPPLE
TQQKGWRHLGGEIATS
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgtaggagacgatgaaattcgctcggctcttccatcggcatcccgtaatggt
ccggtgctgggttcgtcggtggcaacggtcatgtcgggtccacggatggtgagaatagtc
aagtccgagtccggatatggattcaatgtccgcggtcaagtgagcgaaggagggcagcta
cggagtatcaacggcgaattgtacgctcccctccagcatgttagcgcggtgttgcccgga
ggagccgctgaccgagccgggatatcgaaaggagaccggatcttggaagttaatggcgtg
agtgtagaaggtgccacccataagcaggtggtggacctgatccgggccggggagaaggag
ttggtcctggccgtgctctccgtccctcctcaggaggctgatggactcgagggaggagaa
gacgtccaacccaactacgactacagcgacaaacaggccgtgcccatttcaatccccacg
tacaaacacgtagagcagcactccgagaggtttgtggtgtacaacgtgtacatgtcgggt
cgacagctttgctctaagcgctacagagagtttgccatcctgcaccagaacctgaagaga
gagttctccaacttcaacttcccaaagcttccggggaaatggcccttctcgctgtctgag
cagcagctggacgctcgtcgacgaggcctggaggaatatctggagcgagtctgctctgtg
cgggtgatcggggagagtgacatcatgcaggagtttctctctgaatcagatgagaactac
aacggagtgacagacgtagagctgcggatagctctgcctgacaagaccaccatctctgtg
agggtccgtaagaacagcaccacagaccaggtgtatcaggccttagtgatgaaggttgga
atggacagtattatggccagttactttgctctctttgaagtcatcaaccacacctttgta
agaaagctggcacctaatgagttcccccacaagctctatgtgcagaactacacctcagca
gtcccggggacttgcttggcgctccgtaaatggttgtttagcttccaggaggaggagtta
ctccgagacaatccgctggtgctgcactactgctttcaccaggcgttggatgatgtgaag
aagggattcataaaaacagaggacaaatcctaccagctgcagaaactggcagagcagcgc
aagatggccacgtacctgagcctgctgcggacgtgtgaaggctacaacgaggtcgtgttc
ccgcactgctcctgtgactccagacggaagggacatgtcatcacggccatcagcatcaac
cacttcaagctgcatgcctgtactgaggacggcacgctcgagaaccaggtgatcgctttt
gagtgggcagagatgcagcgctgggacacagacgaggagggaatggccttctgcttcgag
tacgcccgaggggagaagaaaccacgctgggtcaaaatcttcaccccctatttcaactac
atgcacgagtgcttcgagcgggtcttttgtgagctgaagtggaggaaacaggtcgaagaa
gatgcgtccgacaaagacaacaagaactgcagtaacaacgacttcctgcctcctctggag
acacaacaaaagggatggcgccacctagggggagagattgcaacatcctaa
DBGET
integrated database retrieval system