Cynoglossus semilaevis (tongue sole): 103394638
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Entry
103394638 CDS
T04866
Name
(RefSeq) SWI/SNF complex subunit SMARCC1-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103394638
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csem03021
]
103394638
03036 Chromosome and associated proteins [BR:
csem03036
]
103394638
Transcription machinery [BR:
csem03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
103394638
Chromosome and associated proteins [BR:
csem03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
103394638
PBAF complex
103394638
GBAF(ncBAF) complex
103394638
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
SWIRM-assoc_3
DUF919
Motif
Other DBs
NCBI-GeneID:
103394638
NCBI-ProteinID:
XP_016896413
LinkDB
All DBs
Position
18:complement(13430095..13437374)
Genome browser
AA seq
910 aa
AA seq
DB search
MAVHRKKDCTPSAWFWESPDTLAQLEVVRQWIGKHYKKFVLVDAPSCQVLAAVTLQLLQF
QEDAFGRQVTNPALSKLSAQCFLDLRPGGGLCHILGTAYRFKAEQGWRRFDLQNPSRTER
NVEMFSAIKGALIQNSCMSLPVVYLEATLNQELANRLTTIITKHQGTITEDQTLASHHIY
PLPATTEEDEWLRPIMRKDNHILVHWGMHPDSYDSWLPSGDVEGEVEEPPHPVGPWRVHA
GWVLDTDVFNEWMNEEDYCVDERNSPLILRQRVRLQDEQESRSTPSKKRRRSPSPPSSDG
RKKGKKGRRRGQQEEEPEEDLTKDMEDPTPVPNMEEVILPKNVNLKKDSENTPVKGGTMT
DLDDQEDDFLGREEEEGRGEMTRFSEGEENITEQTHHIIIPSFTSWFNNNSIHFIEKRAL
PEFFNGKNKSKSPEIYLAYRNFMIDTYRLNPQEYLSSTSCRRNLTGDVCAIIRVHAFLEQ
WGLINYQVDAESRPLPMGPPPTPHFNVLADTPLGLAPLQHKPLQVTASQHMLYFPEKGRE
KPSDCQNFGLRTDIYARKHPKTKGASAGREWTEQETLLLLEALEVYRDDWNKVSEHVGSR
TQDECILHFLRLPIEDPYLEDSSASLGPLAYQPVPFDPRVASSAAKAALEEFSRVQEESV
DKMSEMSNQPEKIESIDQDKDEANSTPQQVSGRTDSKVEASGIKLDGDLIKTENAENMLE
REGTGDDSETTEQRQGDGDDGRRTMELELVEGSVATAAAAALASAATKAKHLAAVEERKI
KSLVALLVETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLTERQTFHTEQLKQAEM
KVRQQREQQGQQGYTMQHSGQSMPNRMLASTGNTQSVAPRHPGASNGMYPSSQPDGITSA
QPGPPPSTHS
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atggcggtacatcggaaaaaggactgcactccgtcggcgtggttctgggagagtccggat
actttggcgcagctggaggtggtgcgacagtggatcgggaaacactacaaaaagtttgtc
ttggtagatgctccatcctgtcaggtcttggctgcagtcaccttacagcttctccagttc
caagaggatgcgtttggtcgacaagtcaccaatcctgctctcagcaaactttccgcacaa
tgcttcttggatttgcgaccagggggagggctgtgccacatacttggaactgcatacagg
ttcaaggcagagcaaggctggcgaaggtttgacttgcagaatccatcaagaactgagaga
aatgtcgagatgtttagtgcaattaaaggggcattaatccagaacagttgtatgtcctta
cctgtggtttatttggaggccacactcaatcaggagttggcaaacagactgaccacgatc
atcacgaagcaccaggggactatcaccgaggaccaaacactcgccagtcaccacatttat
cctttacctgctactactgaagaagatgaatggctacgtcccatcatgcgtaaggataat
cacatcctagtacattggggaatgcaccctgacagctatgacagctggctaccttcgggc
gatgtcgaaggagaagttgaagagccaccgcacccagtgggaccgtggagggtccatgcc
ggttgggtcctagacacagatgtattcaatgagtggatgaatgaggaagactattgtgtg
gatgagaggaactccccattaatccttcgtcagcgtgttcgcctccaagatgagcaggag
tcaagatccactccgtcaaaaaagagaagacgatccccctcacctccttcctctgatggc
agaaagaaaggaaagaaggggagaagacgtggacaacaggaagaggagccagaggaggat
ctgaccaaagatatggaagaccctacccctgttcctaacatggaggaggttatactacct
aaaaatgtgaacctgaagaaagacagtgagaacacaccagtcaaaggaggaacaatgact
gacctggacgaccaagaggatgattttctcggaagggaggaggaagaaggaagaggggag
atgacacggttttcagaaggagaggaaaacattacagagcaaacacatcacattattatc
ccaagcttcacgtcttggtttaacaacaacagcattcactttatcgaaaaacgagctctt
cctgaattctttaacggaaagaacaagtccaaatctccagaaatctacctggcgtaccgt
aatttcatgatcgacacataccggctgaaccctcaggagtatctcagctccacctcctgc
agacgaaacctcactggagacgtctgtgccattataagggtgcatgcatttctggagcag
tggggtttaatcaactaccaagtggatgcagaaagcaggcccctccccatgggaccacca
cccacaccccattttaacgtattggctgacacaccgttaggtctggcacccctgcaacac
aaaccgctgcaggtgactgcttcgcaacatatgttgtacttccccgaaaaaggcagagaa
aagccctcagattgccagaactttggtcttcgcactgacatctatgccaggaagcaccct
aagaccaaaggagcaagtgcaggaagggaatggacagaacaagagacactgttgttatta
gaggctctagaagtttacagggacgactggaacaaggtctctgagcacgtggggtcaaga
acccaggacgagtgtatcctccatttccttcgtctgccaatagaagatccttatctcgaa
gactcctcggcctctctgggtccactggcctatcagcctgtgcctttcgaccctcgggtc
gcatcatctgcagcaaaagcagcactcgaggagttttctagagtgcaagaagagtctgtg
gataagatgtcagaaatgtccaaccagcctgagaaaatagaatcaatagatcaggacaaa
gatgaggccaactccactccccaacaggtctctggaagaacggatagtaaagttgaagcc
agtggcataaaactggatggagatctaatcaaaacagaaaatgcagagaacatgttggag
agagagggcacaggagacgacagtgagaccacagagcagcggcagggggacggtgacgac
gggaggagaacgatggagctggagctggtggaaggcagcgttgccacggcagcagcagct
gctcttgcctcagccgccacaaaggccaagcacttggcggcagtagaagagaggaagatt
aagtctctggtggcattgctagtagagactcagatgaagaagctggagatcaagctgaga
cactttgaggagctggagaccatcatggaccgcgagaaagaggcgctggaacagcagcgg
cagcagctcctcacagagagacagaccttccacactgagcaactgaaacaggcagagatg
aaggtccgccagcagagggagcaacaggggcagcaaggatacacaatgcagcattcaggc
cagtccatgccaaaccggatgttggccagcactggtaacactcaatctgtggctcccaga
caccctggagcatccaatggcatgtatccgtcctcgcagcccgatgggatcacgtcagct
cagcccggacccccaccatcgacacacagctga
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