Cynoglossus semilaevis (tongue sole): 103394758
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Entry
103394758 CDS
T04866
Name
(RefSeq) roundabout homolog 1-like isoform X7
KO
K06753
roundabout, axon guidance receptor 1
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
103394758
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
csem04515
]
103394758
Cell adhesion molecules [BR:
csem04515
]
Immunoglobulin superfamily
ROBO family
103394758
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
C2-set_2
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
Unc5_NetrinR_N
Fn3_VIN3
Ig_PDGFR_d4
Ig_J_second
Motif
Other DBs
NCBI-GeneID:
103394758
NCBI-ProteinID:
XP_008330413
LinkDB
All DBs
Position
19:complement(993044..1069949)
Genome browser
AA seq
1578 aa
AA seq
DB search
MKAEQSHLTFLLISAFYVQLLQLGQTVGMSPDSGEIHDVITRKPESEHDNGFGYRGSRLR
QEDFPPHIVEHPSDLIVSKGEPATLNCKAEGRPTPTVEWYKDGERVETDRDNPRSHRMLL
PSGSLFFLRIIHGRRSKPDDGSYVCVARNYLGQAISHNASLEVAILRDEFRQNPVDVMVA
AGEPAVLECQPPRGHPEPTISWRKDGAYLDDRDERITIRSGKLMITNTRKSDAGKYICVG
TNMVGERESEAAELTVLERPTFVKRPSSMVVLPEESVEFHCVVQGDPVPTIRWRKDESEL
PQGRFEILKDYTLIVHKVTSTDEGSYTCMVENMVGKSEASAVLTVHVNTVPPAFAIRPRN
QVATVGRTVTFQCEATGNPQPAIFWQREGSESLLFSYQPPQPYTRLSVSQMGSLTITDVQ
HSDGGVYSCQALNIAGSVITKALLEVADFGSDHPPVIVQGPINQTVSADSLIVMRCKTTS
PPSSKVHWKKDGAPLSSGDPRLSVTDTGTLQIHHAKLGDTGFYSCVASGPNGEASWTAYL
QVTDSEVHAVHPADPNGIPGAPLKPEVTDIGQTSVTLSWKSNPSAWAPPSSYLIEAFSYT
LGSKWMTMAEHVKTQSFVLRNLKSGTVYLFMVRAVNAHGLSDPSPISDAVRTQVDNTATM
QGVDHRQIQRELGDVVIHLQTPAVLSSSAVRLQWRVEQQSPYIQGYKVLYRASAEHGQPE
GRWSVLHVRNPREDGVVISQLKKGSIYEFKVCPFFDEFQGADSEVKVVKTFEEAPSKAPQ
SVTVTKSDVNGTAILIAWKPPPGSEETGVIQEYKIWCLGNESRYHVNQSVDGSSFSALIF
SLAPGIRYSVEVAASNGAGLGVKSDVTFFQLDSSGQMMDISEDRDSWSQISHVVRQPAFI
AGIGTTCWIMLMIFSVWLYRHRKKRNGLSSTYIGIRKVPSFTFTPSVAFQRGESVCSSGR
PGLLGMGEPLNHLWPPDNWPNACSNHKTCSIDCCNNGNDTSDSNVTTYSRPADCIANYGN
HAENKQLGQLPPGSAVYSDVNLSNKLNDIKIFNNANMCYASQGRDSADTYEPIPYATTQL
IQVSIKNKASSGGAQDDPLDMPFWKPPVPPPIPKEMAAQMQYNLIKQSMMHKDLQGSESV
MHPKNMGYSQPHNYSTAGSHQSSDQGSNSTSGSQTQRSTTQGPKTPKHNVLGWRDALPQA
HADACDCDDYSLPKDKSFDEEERMNICPTPPGQRSVLLPSEVSLSQHNTASPQDNWSSDV
HSEARQISQHNTIHPCPVSPSHTYSSIPLCVDTDEQEDAEEEETDAELADSRYSQHHNGQ
KHKQQLLHPSSRKLLFHGLDPTPDSSTGDLDRSVTGSMVNSWGSASEDNISSGRSSIVST
SEGSFFTDGDFNQAVASSRDIVGLRMCRYPEERVRQHHRPSSPLSTDSNMSPAVTHKRPR
RHKQNQCGQQGSKLRDIFNDDSCMPLNFSSQMSHSDFKARGATLPRMGSGEPQGRRKSSE
THRDGEDTSTVGQDKHKTPLGRKESNKCRQHSEFRDILLYSRPSFPLGKTENSDSSTLMS
CGDSQTKQGGQVASKGQN
NT seq
4737 nt
NT seq
+upstream
nt +downstream
nt
atgaaggctgaacaatcacatctgacgtttcttctcatcagtgcattttatgtacagctg
ctgcagctcggccaaactgtgggcatgtcaccagattctggagagatccatgatgtcatc
acccgcaaacctgaatctgaacatgacaacggctttggatacagagggtctcgtcttcgc
caggaagacttcccccctcacattgtggagcacccctccgacctcattgtgtccaaagga
gaaccggcgactcttaactgtaaggcagaaggtcgtccaacccccacggtggaatggtac
aaagacggagaacgcgtggagaccgaccgtgacaaccctcgctcccaccggatgttactg
cccagtggctccctcttcttcctacgcatcatccacgggcgacggagcaagcctgacgac
ggcagttatgtgtgtgttgctcgaaactacctgggccaggccataagtcacaatgcatca
ctggaagtagcaattttgcgcgatgaattcagacagaaccccgtagatgtcatggttgca
gcgggcgagcccgcagtactggagtgccaaccaccccgaggacaccctgaacccacgatc
tcctggaggaaggatggagcctatttagatgaccgagacgaacgtatcacaatacgcagt
ggcaagctgatgatcaccaacactaggaaaagcgacgccggaaagtacatctgcgttgga
accaacatggtgggagaaagagaaagcgaagctgccgaattaacggtgcttgagcggcca
actttcgtcaagcgacccagcagcatggttgtgttgccggaggagagtgttgaattccac
tgtgttgttcaaggggaccccgtaccaacgatccgctggagaaaggatgaatcagaactg
cctcagggcagattcgaaatcctcaaggactacactttgattgtccacaaagtgacctcc
acagatgagggttcctacacgtgcatggttgaaaatatggtcgggaagtccgaggcttcc
gctgtgctcacggtgcacgtaaacactgtgcctccagcatttgccatccgccccagaaac
caggtagcgacagtaggcaggacggtcaccttccagtgtgaggccacgggcaacccgcag
cctgctatcttctggcagagggaaggcagcgagagtcttctgttctcctaccagccacca
cagccctacactcgtctgtctgtctcccagatgggcagtttgaccattactgatgttcag
cactctgatggcggcgtgtacagctgccaggctctcaatattgctggcagcgttattacc
aaggcactgcttgaggtcgcagactttggatcagaccaccctcctgtgatcgttcagggt
cccatcaaccagactgtatctgcggacagcttaattgtgatgcgctgcaaaaccaccagc
cctccatcttctaaagtccactggaagaaggacggtgctccgctgtcgtcaggagaccct
cgtttatctgtaacagacacaggaactcttcaaattcaccacgccaagctgggtgataca
ggattttactcctgtgtagcttctggtccaaatggagaggcttcctggacggcatacctg
caagtaacagattctgaagtccatgcagttcatcccgccgacccaaatgggattcccggt
gctcctctcaaaccagaagtgactgatattggccaaacctctgtcactctgtcatggaaa
agtaaccccagtgcttgggcaccaccatcatcttacctaattgaggcattcagctacact
ttagggagcaaatggatgaccatggctgagcatgtaaaaacccagtcctttgtcctgagg
aacttgaagtctggaactgtgtacctgttcatggtcagagccgtgaatgctcatggcctc
agtgaccccagtccgatctctgatgccgtcagaacgcaggtagacaacacagccaccatg
caaggcgtagaccaccgccagatccagagggagctgggagacgtagtgatccacctgcag
acaccagctgtgctgtcttcatctgccgtcaggctgcagtggagggtggagcagcagtct
ccctacatccagggttacaaggtgctttacagggcgtcggctgagcacggccagcctgag
gggcgctggagtgtcctccatgtgcgcaacccaagggaggacggcgtggtcatcagtcag
ctgaagaaaggttccatctatgagttcaaagtgtgtccctttttcgatgagttccaagga
gctgacagtgaggtgaaggtggtgaagacatttgaagaagcccctagtaaagctcctcag
agtgttacagtgacaaagagtgatgtcaatggaactgccatcctaattgcttggaaacca
cctccgggctcagaggagaccggagtcatccaggagtacaagatctggtgcctgggtaat
gagagtcggtaccatgtgaaccagtctgtcgatggctcctccttctccgctctcattttc
agccttgcaccaggaattcgctacagtgtggaggtggcagccagcaacggtgcaggactt
ggggtcaagagcgatgtcaccttctttcagctagactcttccggccagatgatggacatc
agtgaggacagagactcgtggtctcagatttctcatgtggtgaggcagcctgcgttcatc
gctggcattggcaccacctgctggataatgctcatgattttcagtgtgtggctctaccgc
caccggaagaagagaaatggcctgagcagcacgtacattggcatccgcaaagttccctcg
tttaccttcacaccttcagtagcatttcaaagaggggagtccgtgtgcagttctggcaga
cctggccttctcggtatgggtgaacctctgaaccacctgtggcccccagacaactggccc
aacgcgtgttccaatcacaagacctgcagcattgactgctgcaataacggcaacgacacc
agtgacagcaacgtgacgacctacagccgaccagctgactgcattgccaactatggaaac
catgcagaaaacaaacagttgggccagcttcctcctgggtcagccgtctacagtgacgtg
aacctgtcgaacaaacttaacgacatcaagatctttaacaacgccaacatgtgctacgcc
agtcagggcagagactcggcagacacgtatgagcccattccatacgccaccacgcagcta
atccaggttagcatcaagaacaaagcctcctctggcggagcccaggacgaccctctggac
atgccgttctggaagccccctgtccctccgccgattccaaaggagatggcggcacagatg
cagtacaatttaataaagcagagcatgatgcacaaagatctgcagggaagtgagtcagtg
atgcaccccaaaaacatgggctacagtcagccccacaattacagcacagcaggctcacac
cagagctcagaccaaggcagcaacagcacctcagggagtcagactcaaaggagcacaaca
cagggacccaaaacgccaaaacataatgtgttaggctggagagacgctctgccgcaggct
catgctgatgcctgtgactgtgatgactacagcttacccaaggacaaaagttttgatgaa
gaggagagaatgaatatctgccctactccacctgggcaaaggtcggttttactaccctct
gaagtgtccctgagtcagcataatacagcatcaccacaggacaactggagcagtgatgtc
cacagtgaagccagacagataagccaacacaataccatccatccctgtcctgtctctcca
tcacacacatacagctccatacccctctgcgtggacactgatgaacaggaggacgccgag
gaggaggaaacagatgcagagcttgctgacagccggtacagccaacaccacaacgggcag
aagcacaaacaacagctgctccatccctcttcacgcaaactgctcttccacggcctggac
ccgacaccagactccagcaccggggatctggacagatcagtcacgggctcaatggttaac
agctggggctcagcatctgaggacaacatttcttcaggcaggtccagcattgtgagcaca
tcagaaggttccttcttcaccgatggcgatttcaaccaagctgtagcctcctccagagat
atcgtgggcctgcggatgtgcagataccccgaggagagagtgcgacagcaccatcggccc
agcagccctctgtctacagacagcaacatgagtccggctgtaacacataaaagacccagg
aggcataaacaaaaccagtgtggtcaacaaggctccaaactgagagacatcttcaatgat
gactcctgcatgcctttgaacttctccagccagatgtcccacagtgactttaaagcaagg
ggggccacactgcctcgaatggggtctggggagccacaaggtcgacgaaagagcagtgaa
actcacagggatggagaggacacatccaccgtgggacaggacaagcacaagactccgctg
ggaaggaaagagagtaacaaatgccgacagcactcagaattcagggacatactattgtac
agtcgtccctcgttcccattagggaagactgagaattccgactcatccactctaatgtca
tgtggcgactcacagaccaaacaaggaggccaggtagcatcaaaaggacagaactaa
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