KEGG   Cynoglossus semilaevis (tongue sole): 103394923
Entry
103394923         CDS       T04866                                 
Symbol
rabgef1
Name
(RefSeq) rab5 GDP/GTP exchange factor
  KO
K20131  Rab5 GDP/GTP exchange factor
Organism
csem  Cynoglossus semilaevis (tongue sole)
Pathway
csem04137  Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:csem00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    103394923 (rabgef1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:csem04131]
    103394923 (rabgef1)
Membrane trafficking [BR:csem04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab associated proteins
    103394923 (rabgef1)
 Protein recycling
   Other Rab GTPase associated proteins
    103394923 (rabgef1)
SSDB
Motif
Pfam: VPS9 DUF5601 zf-A20 DUF7320 CID_GANP
Other DBs
NCBI-GeneID: 103394923
NCBI-ProteinID: XP_016897266
LinkDB
Position
19:4240542..4246284
AA seq 511 aa
MSQRTERRGIHVDQSDLLCKKGCGYYGNTAWQGLCSKCWREEYQRVRQKQIQDDWALAEK
LQREEEAAYASSHGVQTQSHGQSPAQHSGHTSLGPFSKFEEKKTNEKTRKVTTVKKFFSP
SSRTPPKKETQDSKTPSPSISRHASFDTDQVSKDFVEFLKNLQKPGREIHKQCRAFLVNM
SSKKDISAEELSECVQDFYQNMVDRLMTHFKGSSESVEQVMDQVEKYIMTRLYKSVFCPE
TTDDEKKDLATQKRIRALHWVTIQMLCVSMDEEIPEVSENVVKAITDIIEMDSKRVPRDK
LACITRCSKHIFSAIKITKNEPASADDFLPALIYIVLKANPPRLQSNIQYITRFCNPSRL
MTGEDGYYFTNLCCAAAFIEKLDAQSLNLSPEEFERYMSGQASPRFNSSEGDWTSSGAAS
ESTSINPVLVQLNQNLELLSSLSSRQERLVEAAHSLQADLLSWTESVKKEVNDILEKYPL
EIQTCSVSAIDANNVDNENLPPPLTPQVFAG
NT seq 1536 nt   +upstreamnt  +downstreamnt
atgagtcagcggactgagcgacgggggatacacgttgaccaatcagaccttctgtgcaag
aagggatgtggttactatggcaatacagcatggcaaggtttgtgctccaagtgctggaga
gaggagtaccagcgggtccggcaaaaacagatccaggacgattgggcattggcagaaaag
ttgcagcgtgaggaggaggcagcatatgcaagcagtcacggagtacagactcagtcccat
ggccagtccccggcacaacactcaggccacacctctctagggcccttctccaagtttgag
gagaagaaaactaatgagaagactcgcaaagtgaccactgtgaagaaattcttcagccct
tcatcacgcactcctcccaaaaaagaaacccaagatagcaaaacgcccagtccatctatc
agccgccatgccagctttgacacagaccaagtgtccaaggactttgtggaattcttaaag
aacctgcagaaacctggcagggagatacataagcagtgtcgagcgttcttagtcaacatg
tcaagcaagaaggacatcagtgctgaagaactctcagagtgtgttcaggatttctaccag
aacatggttgaccgcctgatgactcactttaaaggctcttcagagtctgtagagcaagtg
atggaccaggtggagaagtacatcatgactcgactgtacaagagtgtgttctgtccagaa
actactgatgacgagaaaaaggatttggccacgcagaaaagaatcagagctttacactgg
gtgaccattcagatgctgtgtgtatctatggatgaggaaatccctgaagtctcagagaat
gtggtcaaagcaataacagatatcattgagatggactccaagagggttccccgggacaaa
cttgcgtgcatcacacgctgcagcaagcacatcttcagcgctatcaagatcaccaagaat
gagccggcctctgctgacgacttcctgcctgcactcatttacattgtactgaaggcaaac
cctcctcggcttcagtccaacatccagtacatcactcgcttctgcaaccccagcaggctg
atgaccggagaggatggatactacttcactaacctgtgttgtgctgcagccttcattgag
aaattagacgcccagtctctcaacctctccccagaggaatttgaacggtacatgtcgggc
caggcttctccgcgattcaacagctcagagggcgactggacttcatccggggctgcatct
gaatctacctccatcaacccggtgctagttcagctaaatcaaaacctagagctgctgtcc
agcctcagcagcaggcaggagcggctggtggaggcagctcacagcctccaggctgatctt
ctctcctggactgagagtgtgaaaaaagaggtgaacgacatcctggaaaaatacccactg
gagattcagacctgctctgtttctgccattgatgccaacaacgtggacaatgaaaacctg
ccaccgcctctaacaccacaggtgtttgctgggtag

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