Cynoglossus semilaevis (tongue sole): 103394923
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Entry
103394923 CDS
T04866
Symbol
rabgef1
Name
(RefSeq) rab5 GDP/GTP exchange factor
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
103394923 (rabgef1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csem04131
]
103394923 (rabgef1)
Membrane trafficking [BR:
csem04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
103394923 (rabgef1)
Protein recycling
Other Rab GTPase associated proteins
103394923 (rabgef1)
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Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
DUF7320
CID_GANP
Motif
Other DBs
NCBI-GeneID:
103394923
NCBI-ProteinID:
XP_016897266
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Position
19:4240542..4246284
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AA seq
511 aa
AA seq
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MSQRTERRGIHVDQSDLLCKKGCGYYGNTAWQGLCSKCWREEYQRVRQKQIQDDWALAEK
LQREEEAAYASSHGVQTQSHGQSPAQHSGHTSLGPFSKFEEKKTNEKTRKVTTVKKFFSP
SSRTPPKKETQDSKTPSPSISRHASFDTDQVSKDFVEFLKNLQKPGREIHKQCRAFLVNM
SSKKDISAEELSECVQDFYQNMVDRLMTHFKGSSESVEQVMDQVEKYIMTRLYKSVFCPE
TTDDEKKDLATQKRIRALHWVTIQMLCVSMDEEIPEVSENVVKAITDIIEMDSKRVPRDK
LACITRCSKHIFSAIKITKNEPASADDFLPALIYIVLKANPPRLQSNIQYITRFCNPSRL
MTGEDGYYFTNLCCAAAFIEKLDAQSLNLSPEEFERYMSGQASPRFNSSEGDWTSSGAAS
ESTSINPVLVQLNQNLELLSSLSSRQERLVEAAHSLQADLLSWTESVKKEVNDILEKYPL
EIQTCSVSAIDANNVDNENLPPPLTPQVFAG
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagcggactgagcgacgggggatacacgttgaccaatcagaccttctgtgcaag
aagggatgtggttactatggcaatacagcatggcaaggtttgtgctccaagtgctggaga
gaggagtaccagcgggtccggcaaaaacagatccaggacgattgggcattggcagaaaag
ttgcagcgtgaggaggaggcagcatatgcaagcagtcacggagtacagactcagtcccat
ggccagtccccggcacaacactcaggccacacctctctagggcccttctccaagtttgag
gagaagaaaactaatgagaagactcgcaaagtgaccactgtgaagaaattcttcagccct
tcatcacgcactcctcccaaaaaagaaacccaagatagcaaaacgcccagtccatctatc
agccgccatgccagctttgacacagaccaagtgtccaaggactttgtggaattcttaaag
aacctgcagaaacctggcagggagatacataagcagtgtcgagcgttcttagtcaacatg
tcaagcaagaaggacatcagtgctgaagaactctcagagtgtgttcaggatttctaccag
aacatggttgaccgcctgatgactcactttaaaggctcttcagagtctgtagagcaagtg
atggaccaggtggagaagtacatcatgactcgactgtacaagagtgtgttctgtccagaa
actactgatgacgagaaaaaggatttggccacgcagaaaagaatcagagctttacactgg
gtgaccattcagatgctgtgtgtatctatggatgaggaaatccctgaagtctcagagaat
gtggtcaaagcaataacagatatcattgagatggactccaagagggttccccgggacaaa
cttgcgtgcatcacacgctgcagcaagcacatcttcagcgctatcaagatcaccaagaat
gagccggcctctgctgacgacttcctgcctgcactcatttacattgtactgaaggcaaac
cctcctcggcttcagtccaacatccagtacatcactcgcttctgcaaccccagcaggctg
atgaccggagaggatggatactacttcactaacctgtgttgtgctgcagccttcattgag
aaattagacgcccagtctctcaacctctccccagaggaatttgaacggtacatgtcgggc
caggcttctccgcgattcaacagctcagagggcgactggacttcatccggggctgcatct
gaatctacctccatcaacccggtgctagttcagctaaatcaaaacctagagctgctgtcc
agcctcagcagcaggcaggagcggctggtggaggcagctcacagcctccaggctgatctt
ctctcctggactgagagtgtgaaaaaagaggtgaacgacatcctggaaaaatacccactg
gagattcagacctgctctgtttctgccattgatgccaacaacgtggacaatgaaaacctg
ccaccgcctctaacaccacaggtgtttgctgggtag
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