Cynoglossus semilaevis (tongue sole): 103394945
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Entry
103394945 CDS
T04866
Symbol
ddx46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103394945 (ddx46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csem03041
]
103394945 (ddx46)
Enzymes [BR:
csem01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103394945 (ddx46)
Spliceosome [BR:
csem03041
]
Complex A
U2 snRNP components
U2 related factors
103394945 (ddx46)
Complex B
103394945 (ddx46)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
KH-I_KHDC4-BBP
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
103394945
NCBI-ProteinID:
XP_008330665
UniProt:
A0A3P8WIX9
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All DBs
Position
19:complement(4599503..4607545)
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AA seq
1059 aa
AA seq
DB search
MGRESRHYRKRSASRGRSGSRSKSRSPEKRSKKDDRDRSRRERSRSRDRRRSRSRDRKRA
RRSRSRDRRWSRSRERRRSRSRDRRRSRSSSPSKSRKTDEKPRSKEKDNVEPVSEKKKLK
EEKEDEKVEDQDFDQNKLEEEMRKRKERVEKWREEQRKKAIENIGEIKKELEEMKQGKKW
SLEDDEDDDDEGSAPMEEDEDEDGEGKPEGKDNEIKENKKEEGEKTETPVEQEAEEDDID
PLDAYMEEVKQEVKKFNMGGVKGNDKKGAMMVTKVVTVVKTKKGPHTHKKGELMENDQDA
MEYSSEEEEVDLQTALTGFQTKQRKVLEPVDHDKIQYESYRKNFYVEVPELAKMTPEEVN
VYRLELEGISVKGKGCPKPIKTWVQCGVSMKILNALKKHGYEKPTPIQTQAIPAIMSGRD
LIGIAKTGSGKTIAFLLPMFRHIMDQRPLEESEGPISVIMTPTRELALQITKECKKFSKP
LGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLGANSGRVTNLRRVTYVVLDEA
DRMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILAKPIEVQVGGRSVVCS
DVEQHVLVIEEEKKFLKLLEILGHYQEKGSVIIFVDKQEHADKLLKDLMKASYPCMSLHG
GIDQYDRDSIINDFKSGACRLMVATSVAARGLDVKQLILVVNYNCPNHYEDYVHRAGRTG
RAGNKGYAYTFITDDQVRYAGDIIKALELSGSPVPQELEQLWASFKDQQKAEGKTIKSSS
GFSGKGFKFDETEHALANERKKLQKAALGLQDSDDEDGALDIEEQIESMFNSKKRVKDLS
AAGAAAGAAGAVSSTAAVSAGGLPGLGPTSAGNIQKLEMAKRLALKINAQKNLGAEAQDV
MQQATNAILRGGTIMTPSVSAKTIAEQLAEKINAKLNYTPVEKLEEERQAAEQSETVRRY
EEELEINDFPQTARWKVTSKEALQRIGEYSEAAITIRGTYFPPGKEPKEGERKIYLAIES
ANELAVQKAKTEITRLIKEELIRLQNSYQPTSKGRYKVL
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgggacgcgagtcaagacattacaggaaacgctcagcgtctcggggaaggtccggtagc
cgctctaagagtcgctctccggaaaagcgctccaagaaagacgaccgggaccggagtcgg
agggaaaggtcacgcagtcgggaccgccgccgctcacgctcccgagacagaaaacgagca
aggcgatccaggagtagggacaggagatggtccagaagcagagagagacgaaggtccaga
agcagagacaggcgaaggtcgagatccagcagccccagcaagagcagaaaaactgatgaa
aaaccaaggagtaaggagaaagacaatgtggaaccagtatcagaaaagaagaagctcaaa
gaagagaaagaagatgaaaaagttgaggatcaagactttgaccagaacaagttggaggag
gagatgagaaagaggaaggagagagttgaaaagtggagggaggagcaaagaaaaaaggcc
attgaaaacattggtgaaatcaagaaagaactggaggagatgaagcagggcaagaagtgg
agtctggaggacgatgaggatgacgatgacgagggttcagcaccaatggaggaagatgaa
gacgaagatggggagggtaaaccagaggggaaagataatgaaataaaagaaaataaaaaa
gaggaaggtgagaagacagaaactcccgtggagcaagaggctgaggaagatgacattgat
cctctggatgcttacatggaagaggtgaaacaggaagtgaagaagttcaacatgggagga
gtaaaaggaaatgataagaagggggcaatgatggtgaccaaagtagtgactgttgttaaa
actaagaaaggaccacacactcacaagaagggtgagctgatggagaatgaccaggatgcc
atggagtactcatcagaggaggaagaggtggatttacaaacggctctgacaggtttccag
accaaacagaggaaggtcctggagcctgttgaccatgacaagatccaatacgagtcctac
cgcaagaacttctatgtggaggtaccagagctcgctaagatgacacccgaagaagtcaat
gtgtacaggttggagctggaaggcatttcagtaaaagggaagggttgccccaaacccatc
aagacctgggtgcagtgtggggtctctatgaaaatcctcaatgcgttaaagaagcacggc
tatgagaagccaaccccgattcagacccaggctattcctgccatcatgtctggcagagat
cttattggcatcgccaagacaggcagtggaaaaactatcgccttcttgttgcccatgttc
cgacacattatggatcagaggcctttggaggaatctgaggggccaatctctgtcatcatg
actccgacaagagagttagctctgcagatcacaaaggagtgtaagaagttctccaaaccc
ctcggactcagagtggtttgtgtgtacggtggcactggtatcagtgagcagattgctgag
ctgaagagaggagcagagatcatcgtctgcacccccggaagaatgattgacatgttgggg
gccaacagtggtcgagtcaccaacctgcgcagagtgacatatgttgtactggatgaagca
gacaggatgtttgacatgggctttgagccacaggtgatgcgtatcgtggacaacgtgcga
cctgaccgtcagaccgtcatgttttcagccaccttccccagagccatggaggctcttgct
cgtaggattcttgctaagccgattgaagtccaggtcggaggacgcagtgtcgtctgctct
gatgtggagcaacatgtgctggtgatcgaagaggagaagaagttcctaaagctgctggag
attctgggtcactaccaggagaagggttcagttatcatctttgtggataaacaggagcac
gccgacaaactgctgaaagacctgatgaaggcttcatatccatgcatgtcactgcacgga
ggaattgaccagtatgacagagacagcatcatcaatgacttcaagagcggcgcctgtcgt
ctgatggtggctacatctgtagctgccagaggtctggatgttaagcagctgatcctggtg
gtcaactacaactgtcccaaccactatgaagactacgtccacagggcgggacgtacaggc
cgagctggcaacaagggatacgcttacaccttcataacagacgaccaggttcgttacgct
ggtgacatcatcaaagctttggagctctctggttctcctgtcccacaggagctggagcag
ctttgggcctccttcaaagaccagcagaaagcggagggtaagaccatcaaaagcagcagt
ggcttctcggggaaaggcttcaagtttgatgagacagagcacgccctggccaatgagagg
aagaagctacagaaagctgctctgggtctgcaggactctgacgatgaggatggagcgctg
gatattgaagagcaaatcgagagcatgttcaactccaagaagagggtgaaggatctgtct
gccgccggggcagcagcaggtgctgcaggtgcagtttcttccacagcagctgtctcagca
ggcggtctgccaggccttgggcccacatctgctggaaacatccagaaactggagatggcc
aagagactagcgctcaagatcaacgctcagaaaaacctgggagctgaggctcaggatgtg
atgcaacaggccacaaacgccatcctgcgtggcggcaccatcatgacaccctcggtctct
gctaagaccattgcagagcagctggctgaaaagatcaatgccaagctgaactacacccct
gtagagaagctggaggaggagcgacaggcggcagaacaatcagaaacagtcagaagatat
gaagaggagctggagatcaatgacttccctcagaccgctaggtggaaggtgacgtctaaa
gaagctctgcagaggattggtgaatactctgaagctgccatcaccatcagaggaacctat
ttccctccaggcaaggagcccaaagaaggagaacgcaagatctacctggctatagagagt
gctaatgaattagctgtgcagaaagctaagacagagattacgcggttaatcaaggaagaa
ctcatccgattacaaaattcctaccagccaacaagcaaaggccggtacaaagtgctgtag
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