Cynoglossus semilaevis (tongue sole): 103394957
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Entry
103394957 CDS
T04866
Symbol
rexo1
Name
(RefSeq) RNA exonuclease 1 homolog isoform X2
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
103394957 (rexo1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csem03009
]
103394957 (rexo1)
Ribosome biogenesis [BR:
csem03009
]
Eukaryotic type
Pre-60S particles
RNases
103394957 (rexo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EloA-BP1
RNase_T
REX3_middle
Motif
Other DBs
NCBI-GeneID:
103394957
NCBI-ProteinID:
XP_008330684
UniProt:
A0A3P8WI25
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Position
2:complement(5240130..5251649)
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AA seq
1264 aa
AA seq
DB search
MLRSTGYFRGIDCPFYAEYSEGKGDRNGCNRPYCHFRHSKQRRASYGAPVDVKKQRDIHS
ANKEQGYDPFNPEVVKPQDQHDGKSPAPGDFSGALELVNRAIEEVRSEVEREQKKLCQIG
DEPYTPREKKSSSHLSDKNKTATSHQAYDPGSYQITSGGYNPTPGCSKYTLDSGSEENNS
NSMEYVPTSLKKPSAQTHAPKPSSPPISPNRSNSTLSFKCKYTLDNSKPSTDMEYDPLSN
YSAGITTKSKRNQVNSALKANKSRTHKVPTYELSDEECVDVKNPQQSTVDTKKYTFSESD
EESSGTEYRPTSLSNLQQRKANMASAGVAFSRERKDKKECVPNALTQRNKEDSGQDSDIQ
EVTVKHKSIEKKTKVASHASHENNVKSDQIHKLSKDANKTFISKSSHSSSKGSIKTLKQE
SAKKENKSLERRDDRENKVKEKARDKIHMVGRDVKIRSGEKMKIDSSKRERETENCAKEF
KKLKTDREKEKNKYKDHQLKNGTLDSSKRDRDVKRVSKSSCHSETKSSSSKGSSANSSKT
KQSYSLTKERRPEKKRPHLSLSHADLFGDESPDEAEPIVVDDSDEEVEEVLVRKSADALK
RGSLKKRKASELTPSSSDYEGDCGVDDGAQVKDELDEVEIDLSGFQDDLDFESDPMEECL
RIFNESKDVKKEDKGRQTKQPLRESEEDRSTEGTLSAPLPGQKKRVSHFVAKGNAETSSK
PVVRPYKRLTAQEVCYQRMQLAQQQAVQLSASAKAAAQSSGHSFSGERKRIAHRPNRQIT
VTTTGAADAKPTVSKVLSLSQSHQSVQPQTTACILSKTTSTIIGKRVAHTPTLKSSSMKR
PVIPSEFGAKVPTNIRQRYLNTFIDECVKFCPSEEAAFQMGLDEEKLVYERSSSKNIYLN
IAVNTLKKLRSKSSSSPSPAYKEPGLPPNRRAQSHEDVLGGRLAATTSFTINRTGKQQEE
KLTGATLYRKLQSYLMTEEQLQEHGYPRSNPEAAGKALIFNQPEKKIVPDPFNKICCRCG
AEYRINVSGNCVRKEECTFHWGRLRRHKVAGGWETSYSCCSAAVGTLGCQVSKQHVQDGR
KESLDGYVKTFSKRLPPDGNGGVFALDCEMCYTKLGLELTRVTVIDSRMKVIYDTFVKPE
KKVVDYNTRFSGVTQEDLENATITLRDVQAVLLSMFSAESILIGHSLESDLLALKLIHSS
VVDTAIVFPHRLGLPYKRALRNLMADHLKRIIQDNVDGHDSSEDATACMELMMWRIKEDA
KVKR
NT seq
3795 nt
NT seq
+upstream
nt +downstream
nt
atgttacggtccaccggctactttcgtggcattgactgcccgttttacgccgagtacagc
gagggcaaaggcgacaggaacggctgtaatagaccgtactgtcacttcagacacagcaag
cagaggcgagcgtcttacggagctccagtagacgttaaaaagcaaagagacatccactca
gcaaacaaagaacaaggttacgatcccttcaacccagaagtggtgaagccacaggaccag
catgatggaaagtcgcctgccccgggagatttcagcggtgctctggagttggtcaacaga
gccattgaggaggtccgcagtgaggtggagagggagcagaagaagctctgtcaaattggg
gatgagccctacactcccagggagaaaaaaagcagctcacatttgtctgacaaaaacaaa
acagccacttctcaccaggcctatgatcccgggagttatcaaattacatcaggaggttat
aatccaaccccaggttgtagtaagtacactttggattcaggctctgaggagaataacagt
aactcaatggaatatgttcctacttctctgaaaaagccttctgctcagacgcacgctccc
aaaccttcgtctccacctatcagtccaaacaggtcaaatagcacgttatctttcaagtgc
aaatacacattggataattcaaaaccatctactgacatggaatatgaccccctttctaac
tactcagcggggatcactacgaaaagcaagagaaatcaggtgaactctgctctaaaggca
aacaagagcaggacacacaaagtgcccacgtatgaattgtcagatgaggagtgtgtggat
gtgaagaatccgcagcagtctactgtggacaccaaaaaatacactttctctgagtctgat
gaggagagctctggcacagagtaccgacccacgtccctcagtaatctccaacagaggaaa
gccaacatggcttcagctggagttgctttttcaagggagagaaaggacaaaaaagaatgt
gtgccgaatgccctgacacagaggaataaagaggattcaggacaggactcggacattcag
gaagtgactgtgaaacataaaagtatagagaagaagacgaaggtggccagtcatgctagt
catgagaacaatgttaaatctgatcaaatccataaactgtctaaagatgcgaacaaaacc
ttcatttccaagagcagtcacagcagcagcaagggttctataaaaaccttgaagcaggag
tctgcaaaaaaggagaacaagagtctggagaggagagatgatagagaaaacaaggtgaag
gaaaaggcgcgtgataaaattcacatggtgggacgagatgtgaagatcaggtcaggagaa
aaaatgaaaatagactcgagcaaacgagagagagaaactgagaattgtgcaaaagaattc
aagaaactcaaaacagacagggaaaaggaaaagaataaatataaagaccaccaacttaaa
aatggcacacttgatagtagtaaaagagacagggatgtcaagagggtgagtaaaagcagt
tgtcacagtgagaccaagagcagctccagtaaaggaagttctgccaacagcagtaagacg
aagcagagctacagcctaacaaaagagagaagacccgagaaaaaacgtccacatctgagt
ctgagccacgccgacttgtttggagatgaaagtccagatgaggctgagccgatagtggtg
gatgacagcgacgaggaggtagaggaggttttggtgagaaaatcagccgatgctttaaag
agaggaagtctgaaaaagaggaaagcatcggagctgacaccctcctcctcagactacgag
ggagactgcggcgtggacgacggcgctcaagtaaaggatgagcttgacgaagtggaaatc
gacttgtctggttttcaggatgatctggactttgagtcggacccgatggaagagtgtttg
cggatcttcaatgaatccaaggatgtgaagaaggaagataagggcaggcaaactaaacag
cctctcagggagtcagaggaagacagaagcactgagggcacattgtccgctccccttccc
ggtcagaagaagagagtgtctcattttgttgccaaaggaaatgcagaaacgtcttctaag
cccgtggtgcgtccgtacaagagactgacggctcaggaggtctgttaccagcggatgcag
ctggcacagcagcaggctgttcagctttctgcttcagccaaagctgctgctcagagctcc
ggtcacagcttctccggagagaggaagagaatagcacaccgtcccaaccgacagatcaca
gtgaccacgacaggtgctgcagatgctaaaccaactgtgagtaaagtcttgtccctcagc
caatcccatcagagtgtccagcctcagaccaccgcttgtattttgtccaaaaccacatcg
actataatagggaagagggtggcacacacaccgaccttgaagagttcttcgatgaagcgg
ccggtcatcccctctgaattcggggccaaagttcccaccaacatccgccagcgctacctc
aacactttcatagatgaatgtgtcaaattctgcccctctgaagaagctgccttccagatg
ggccttgatgaggagaagctggtgtacgagcgcagcagcagtaagaacatttacctcaac
atagctgtcaatactctgaagaaactgcggagcaagagcagctccagtccttcacctgcc
tacaaggaaccagggttaccccccaacaggagggctcagtcccacgaggacgtcctcggg
ggtcgtctggctgctacaaccagcttcactatcaacaggacgggtaaacagcaggaggag
aaactgacgggagccacactgtacaggaagctgcagtcgtatctgatgacggaggagcag
ctccaggagcacggatacccgagatcaaacccagaggctgctgggaaggctttaatattc
aaccagccggagaaaaaaatagttccagaccccttcaacaaaatctgctgtcgatgtggg
gcagagtacagaatcaacgtcagtggaaactgtgtacgcaaagaagaatgcacttttcac
tggggacgtttacgcagacacaaagtggctggaggctgggagaccagttacagctgctgt
tctgctgctgtgggaactctgggatgtcaagtgtccaagcaacacgttcaggacggacgt
aaagagtcgttggacggctacgtgaagactttcagtaagcgtctaccgccagatggcaac
ggaggggtgtttgctttggactgtgagatgtgctacacaaaactgggcctagagctgacc
agagtgacggtcatcgactcaaggatgaaagtcatctacgacacttttgtcaaacctgag
aagaaggtcgttgactacaacacgcgattttcaggtgtgactcaggaggacttagaaaac
gccaccatcactctgagagatgttcaggccgtgctgctcagtatgttcagtgctgaatcc
attctcattggacacagtctggagagtgacctcctggctctgaagttgatccacagttca
gtcgtagacacggccatcgtgttccctcaccgtctgggtttgccctacaaacgtgccttg
aggaacctgatggccgaccacctcaaacgcatcatccaggacaacgtggacggacacgac
tccagtgaagacgccactgcctgtatggagctgatgatgtggaggatcaaggaggatgct
aaagtcaaaagatga
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