KEGG   Cynoglossus semilaevis (tongue sole): 103395047
Entry
103395047         CDS       T04866                                 
Symbol
vps11
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog
  KO
K20179  vacuolar protein sorting-associated protein 11
Organism
csem  Cynoglossus semilaevis (tongue sole)
Pathway
csem04140  Autophagy - animal
csem04142  Lysosome biogenesis
csem04148  Efferocytosis
csem05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:csem00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome biogenesis
    103395047 (vps11)
   04140 Autophagy - animal
    103395047 (vps11)
   04148 Efferocytosis
    103395047 (vps11)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    103395047 (vps11)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:csem04131]
    103395047 (vps11)
Membrane trafficking [BR:csem04131]
 Endosome - Lysosome transport
  Tethering complex
   CORVET complex
    103395047 (vps11)
   Hops complex
    103395047 (vps11)
SSDB
Motif
Pfam: PEP5_VPS11_N TPR_PEP5_VPS11 VPS11_N VPS11_C VPS18_solenoid_2nd Clathrin Beta-prop_WDR3_1st zf-C3HC4_2 zf-C3H2C3 zf-rbx1 Beta-prop_WDR36-Utp21_1st Beta-prop_IFT122_1st zf-RING_2 zf-C3HC4 WD40_Prp19 Beta-prop_EML_2 TPR_GEMI5 zf-ANAPC11 zf-RING_5 ADIP zf_RING_Vps8_fungal Rab11-FIP3 Beta-prop_VPS8 Beta-prop_WDR5 TSGP1 CC_Bre1 zf-RING-like Beta-prop_HPS5 Kbp-5
Other DBs
NCBI-GeneID: 103395047
NCBI-ProteinID: XP_008330827
LinkDB
Position
19:6804823..6811293
AA seq 923 aa
MSAFLQWRKFVFFDKEAVKDPVDNGKNFVLPAGISACDSGRGHIVLGDMDGKIWLMTRSL
QLTSFQAYKLRVTHIYQLKQHSILVSVGQDEQGINPLVKVWNLDKKDSGNPLCTRIFPAI
PGNKPTEVSCLSVHENLNFMAIGFTDGSVVLTKGDITRDRHSKTLTLHEGTSPVTGLAFR
QVAKVTNLFVATLEKVYCYTLSIKEYPKIELDTHGCALHCSSLADPSQDSQFIVAGDECV
YLYQPDERGPCFAFDGHKLLAHWHRGYLFLLIRDTKSPNKSAFGSRESSPSEKQLLTIYD
LDNKFIAYSASLDDVIDVVAEWGSFYILTRDGKMFVLQEKDTQTKLEMLFKKNLFVMAIN
LAKSQHLDSDGLSEIFRQYGDHLYLKGDHDGAIQQYIRTIGKLEPSYVIRKFLDAQRIHN
LTAYLQALHRQSLANADHTTLLLNCYTKLKDSSKLEEFIKSSESEVHFDVEIAIKVLRQA
GYHSHAVFLAEKHMHHEWYLKIQLEDLKNYQEGLRYIGRLPFEQAECTMKHYGKTLMHNV
PEGTTLLLKGLCTNYQPSGEKDSEERRRVNKANSEEFIPIFTNNRRELKAFLEHMIEVDP
RSPQGVYDTLLELRLQDWAHEQDLERKKVLQGEALSLLRSDNTVFDKALVLCQMHNFKEG
VLYLYEKGKLYQQIMHYHMQNEEYGKVVEACKRYGDQESCLWEQALGYFARKEEDCKAYI
SEVLHHIDQNNLMPPLLVVQTLAHNSTATLSVIKDYLISKLQRESQQIEDDERKIRQYRE
DTANLRSEIQELKTSAKIFQKTKCNMCNSPLELPSVHFLCNHSFHQHCFESYAESEAECP
TCTPENRKVMDMLRAQDQKRDLHDHFNRQLRSSNDGFSVVADYFGRGVFNKLTLVTDLPG
NKSVGSLEGNLQRDLLIHTKRHS
NT seq 2772 nt   +upstreamnt  +downstreamnt
atgtcagccttcctacagtggaggaaatttgttttcttcgacaaagaggccgtaaaagac
ccggtggacaatggaaagaattttgtgcttccagccggaatctcagcctgtgactccggg
aggggacacattgtcctcggagatatggatggcaaaatatggctcatgacccgatccctg
cagctgacttcttttcaggcgtacaagctgcgcgtcacacatatttaccagctgaagcag
cacagcatcctcgtgtcagtggggcaggatgaacagggaataaaccctctagtaaaagtc
tggaatttggacaaaaaggacagtggaaatcctctctgcacacgtatttttccagcaatt
cctggcaacaaacccactgaagtgtcctgtctcagcgtacatgaaaacctcaactttatg
gctattggcttcacagatggcagtgtggttttaaccaaaggtgacatcaccagagatcgt
cacagtaaaactctgactctgcatgagggcaccagtccagtgactggcctcgccttccgc
caagtggcaaaagtcactaacttgtttgttgccactttagagaaagtctattgctacaca
ttgtccattaaggagtaccctaaaatagagctggatacacatggctgtgcgctgcactgc
tcttcattggcagatccctcccaggattcccagttcattgtagctggtgatgaatgtgtt
tacctgtatcaaccagacgagcgcggcccctgctttgcatttgatggacacaagcttctt
gcccactggcatcgtggatatctgtttttactcataagggatacaaagtcacccaacaag
tctgcattcggcagcagggagagctcaccatctgagaaacaacttctgaccatctatgac
ctggacaacaagttcattgcatacagcgcctctttggatgatgtcatcgacgtggtggca
gagtggggctccttctacattctgaccagagatggaaaaatgtttgttcttcaggaaaaa
gacacacaaaccaaactggaaatgttgttcaaaaagaatctgtttgtaatggccatcaac
ctggctaagagccagcacctggacagtgatgggctctcggagatctttagacagtatggt
gaccatctctaccttaaaggagaccatgacggtgccatacagcagtacattcgcaccatt
ggcaaactggagccgtcatatgtcatcagaaaattcctggatgcacagaggattcacaat
ttgacagcgtatttgcaggccctacacagacagtcgctggctaacgcagaccacaccact
ctgctactcaactgctacaccaaactgaaggacagctccaagctggaggagttcatcaag
agtagtgaaagtgaggttcactttgatgttgagatcgccatcaaggttcttaggcaggca
ggctaccacagccatgcagtttttttggctgagaaacacatgcaccatgagtggtacctg
aagatccagctcgaagacctgaagaactaccaagaagggttgcgttacatcggccgtctg
ccttttgaacaagccgaatgcaccatgaagcattatggcaagactctgatgcacaatgtc
cctgaaggtaccacgctgctccttaaaggcctgtgcactaactaccaaccgagcggagaa
aaagacagcgaagagaggaggcgggtcaataaggccaactcagaggagtttatccccatt
ttcacaaacaaccgtcgggagctaaaggccttcctggagcacatgatcgaggtggatcca
cgttctccccagggtgtgtacgacacactgctggagctccggcttcaagactgggcccat
gaacaggatttagagaggaagaaggtcctgcagggtgaagcactgtctctgctgaggagt
gacaacactgtctttgataaagccttggtcctttgccagatgcataactttaaagaaggt
gtcctctacctttatgagaagggaaagctgtaccagcagatcatgcactaccacatgcag
aatgaagagtatggaaaagtggttgaagcctgtaaacgttatggagaccaggagagttgt
ctgtgggagcaggcactgggatactttgccaggaaagaggaagactgtaaggcctacatc
agcgaggtcctgcatcacattgaccagaacaacctgatgccacctttactggtggtacag
acactggcacacaactcaacagccacgctctccgtcatcaaagactacctcatcagcaag
ttacagagggagagccagcagatagaggacgatgaacgcaaaatcagacagtaccgtgag
gacacagctaaccttcgctctgagattcaagagctcaaaaccagtgccaagatcttccag
aagaccaagtgcaacatgtgcaacagtcccctggaactgccgtctgtccatttcctgtgc
aatcactccttccaccagcactgctttgaaagctacgcagagagtgaggctgagtgtccg
acctgtacaccagaaaacagaaaggtcatggacatgctgcgtgcacaggaccagaagcgt
gatctacacgaccacttcaacagacagttacgcagctctaatgatgggttctctgtggtg
gctgactactttggtcgaggggtttttaacaaactgactctggtcactgacctacccgga
aacaaatcagttgggagtcttgaggggaaccttcagagagaccttctcatccacaccaag
aggcacagctag

DBGET integrated database retrieval system