KEGG   Cynoglossus semilaevis (tongue sole): 103395157
Entry
103395157         CDS       T04866                                 
Name
(RefSeq) nectin-1-like isoform X1
  KO
K06081  poliovirus receptor-related protein 1
Organism
csem  Cynoglossus semilaevis (tongue sole)
Pathway
csem03266  Virion - Herpesvirus
csem04514  Cell adhesion molecule (CAM) interaction
csem04517  IgSF CAM signaling
csem04520  Adherens junction
csem05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:csem00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03266 Virion - Herpesvirus
    103395157
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecule (CAM) interaction
    103395157
   04517 IgSF CAM signaling
    103395157
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04520 Adherens junction
    103395157
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    103395157
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:csem04515]
    103395157
   04090 CD molecules [BR:csem04090]
    103395157
Cell adhesion molecules [BR:csem04515]
 Immunoglobulin superfamily
  Nectin family
   103395157
CD molecules [BR:csem04090]
 Proteins
  103395157
SSDB
Motif
Pfam: C2-set_2 V-set Ig_2 ig Ig_3 I-set Ig_PVRIG
Other DBs
NCBI-GeneID: 103395157
NCBI-ProteinID: XP_008330981
UniProt: A0A3P8VNL6
LinkDB
Position
19:8191238..8201053
AA seq 502 aa
MGKTGFGIFLVINCVVSGIIGQKVEMDDDRWGYVDSKVDLRCRFINSSPPVKISQVTWQK
LVNGTKQNVAIANPSLGVSVAPPYKDRVAFKNAAVRRRTPNLEDTTITFSSLRLTDESTY
ICEYTTFPAGNRENTVNLSVYVRPTTQMSLSTPTLVARSSNQRTPVATCISANGKPPGSI
RWEAKVPGEVTTREYKNPDGTFTIQSDYILVPSKESHKETLTCVTTYNDEVFTDSVTLDI
QYEPDVSVEGFDGNWYLNRENVQLSCRADANPAVSLFQWRLVNGSMPSNAEIRDNVVIFK
GPVTYDLQGIYVCDATNSIGTQSGSVEVSIIEKPLPQIATSDVISVIALLLAAGVLMGIT
ITVLILKIRTKKDGPSNSSTSKKKAQQMRKRPADENQHSGRFYEELPNTADYVSYRLACN
KEDYPEPYSPPINPPLSFLPQQPYHSSQPTSTNTTRSSSTSSKNTFSPSSHTMAIFKYPT
VPGMSSPPPGVGGYQTPKEQYV
NT seq 1509 nt   +upstreamnt  +downstreamnt
atgggaaagacgggatttgggattttcctggtgataaactgtgttgtttcaggaatcatt
ggtcagaaggtggaaatggacgatgacaggtgggggtacgtggactccaaggtggatctc
cgctgtcgtttcatcaacagctctccacctgtcaaaatctcccaggtaacctggcagaaa
ctagtcaacggtactaaacagaacgtggccatcgccaacccctcactgggcgtgtctgta
gccccgccctacaaggatcgcgttgccttcaaaaacgcggcagtgaggagacggacgcca
aacctggaagacacgaccatcactttctcctccctccgcctcacagatgagtccacatac
atctgtgaatacaccaccttcccagcagggaaccgagagaacactgtcaacctctctgtc
tacgttcgtccaacaactcagatgagcctgtccacaccaacactggtggctcggtcatcc
aatcagaggacacctgtggccacctgcatctctgccaatggaaaaccacctggttccatt
aggtgggaggccaaggtgcctggagaagtgaccactcgagagtacaagaaccccgacggc
acgttcactatccagagcgactacattttggtgccaagcaaagaaagtcataaagagact
ctcacctgtgtcactacctacaatgatgaagtcttcaccgacagcgtcaccctcgacata
cagtatgagccagatgtttcagtggagggatttgacgggaactggtacctgaacagagag
aacgtccagctgagctgcagagctgacgccaaccctgccgtctccctctttcagtggaga
ctggttaacggctccatgccgagcaacgcagagatccgagacaacgttgttatcttcaaa
ggaccagtcacatatgacctgcagggcatttatgtgtgcgatgctactaacagcatcgga
acgcaatcgggttctgttgaagtcagcatcatagagaagcctctacctcaaattgcaacc
agtgatgtcatcagcgtcattgctctattactggctgctggagtgctgatgggcattaca
atcacggtgttgattctcaaaataaggactaaaaaagacggaccctcaaatagctccact
tccaaaaaaaaggctcaacaaatgaggaaaagaccagcagatgaaaaccagcattctgga
cgcttctacgaggagcttccaaacacagcagattacgtgagctacagactggcctgtaac
aaagaggactacccagagccctactctccccccatcaaccctcctctgtcctttctgccg
cagcagccgtaccactcctcacagccaacctctaccaacaccaccaggagcagcagcacc
tcgtccaaaaacaccttctctccctcgtcacacaccatggccatcttcaaataccccacc
gtaccgggcatgtcttcacccccgccaggcgtcgggggctaccaaacacccaaggagcaa
tacgtctga

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