Cynoglossus semilaevis (tongue sole): 103395172
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Entry
103395172 CDS
T04866
Symbol
rnf43
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43 isoform X1
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
103395172 (rnf43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csem04121
]
103395172 (rnf43)
Enzymes [BR:
csem01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103395172 (rnf43)
Ubiquitin system [BR:
csem04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103395172 (rnf43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_5
zf-RING_UBOX
zf-ANAPC11
zf-C3HC4_3
pAdhesive_17
PA
Motif
Other DBs
NCBI-GeneID:
103395172
NCBI-ProteinID:
XP_008331007
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All DBs
Position
19:complement(8969274..9033412)
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AA seq
836 aa
AA seq
DB search
MTVPQRRRAGLWPWLLMAALQQVVLAQPGLEPERPVLRALIKVTLLKNEPTGKPITLEGV
FVGGSAGYAEGKLMQYHPLSLCNTSEDERQESDFITIVKLEHRVPRCLSLPEKARMALEK
GAQAVIFDVSDDAKAAAELRETEALPRPVVLVEAEDAEELMGLVNKNEEAKVRIEILIEQ
SKWPHYDVGILLTVFLAILTIVLIFVFRYKCKSSRTWDSVHQQTMRAIKRLKIRIYRSPD
CSGSQHQRGAWGSASSNSNPVCAICLEEFQDGQHLRIVSCDHEFHKDCVDPWLLQHRTCP
LCKHNIMGEDKYSYRTERQPPRNRLQQSSEQSQRFLHPQSYSSAHNHPFPQHAIPFSMRP
HYPHGPSGPYPSLGHYSGSSPMEPQTLRFLTSRQHGSGCGHRMPAEGAPRSHRIGNNCRT
STHHYAPRRTCQNYRSSCPTQRSASCSRLHPTAAVTPQTRGAPAHSRHDEGSCSGGSYHT
ERSGYLADGPASDSSSGPCHGSSSDSVLNCTDVSLQGVYGSWSTFRSSLSSDYDPFVYYG
PSAGRDPRKNSLEHEPQVRPRSLDSVGNKTGCPEEQPQTVFSHIHYHRHRHHHYEEGEHS
PGLSRGSDEEQGAAAAAAAVVAAAAVPVPAAPATLVVGRDSPVFSPKHSPCQCPKPHPPD
RLSPGQAECQDQELGGSSEPPVPLSPIPLQLPPHCCHQGPAHPHPPRMGGCVLDGPSVCF
HQSLDLQDNHSIHIHYSQDTGFCCSPPELHPALLPVPLILDSGGVEEWPCCSGAHVVWQK
RVQQAHSEPQLLAPGPSMDRSPCRFHHGPGPECNTDICLYCQTLHHNQGSEEESGV
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atgactgtcccccagcggcgccgggccgggctctggccgtggctgctcatggcagccttg
cagcaggtggtgctggcccagccgggcttggagcccgagcggccggtcctgcgagcgctc
atcaaggtgacgctgctgaagaacgagcccacggggaagcccatcactttggagggggtg
ttcgtaggaggaagtgccggatatgcggaggggaagctcatgcagtaccaccctttgtct
ctttgcaacaccagcgaggatgaaaggcaggagagtgacttcatcaccattgtcaagctg
gagcacagagtaccccgctgtctgtcactgccggaaaaggctcgcatggccctggagaaa
ggagctcaggccgtcatatttgatgtcagtgacgacgccaaggctgctgctgagttgcga
gaaacagaagcacttccccgtcccgtggtgctggtggaggctgaggacgctgaggagctg
atgggtttggtcaacaagaacgaggaggccaaagttcgcattgagatcttgattgagcag
tcgaaatggccacattacgatgttggtatcctgctcaccgtcttcctggccattttgacc
atcgtcctaatctttgtctttcgctacaagtgcaagtccagtaggacatgggactctgtt
catcagcagacgatgcgggctattaaacgactgaagatcagaatctacaggtctcctgac
tgctccggttcacagcaccagcgaggggcctgggggtctgctagctccaactcaaaccct
gtctgcgctatttgtctggaggagttccaggatgggcagcatttgaggatcgtctcctgt
gatcacgagtttcataaagactgtgtggatccctggctactgcagcaccgcacctgtccc
ctctgcaagcacaacatcatgggtgaggacaagtatagttacaggacagagcggcaacca
ccaaggaacaggctccagcaaagttcagaacagagtcagcgtttcctgcaccctcagtct
tacagcagcgcacacaaccaccccttccctcagcacgcaattcctttctccatgagaccc
cactacccacatggaccatctggaccgtacccttcactgggccactacagtggttcttct
cccatggaacctcagactctgcgattcctcaccagcagacagcacggctctggctgtggc
caccgcatgcctgcagagggcgctccgaggtcccacaggattggtaacaactgtaggaca
tccactcaccactacgctccgcgtcgtacctgtcagaactatcgatcgtcctgcccaacc
cagcgcagtgcgtcctgctccaggctgcaccccactgccgccgttaccccacagacgcgt
ggagcacctgcccacagtcgtcacgacgagggcagctgctcagggggcagttaccacacg
gagcgcagtggatatttagctgacgggcctgcaagtgactctagctccgggccctgccac
ggctcttctagcgattcagttcttaactgtactgatgtatcattgcagggagtgtacggc
agctggtccacgttccgtagttctctgagtagtgactatgatccgtttgtgtattatggg
ccaagtgctggccgggatccccgaaagaacagcctggagcacgaacctcaggttcggccc
aggtctctggactctgtggggaacaaaacgggctgccccgaagaacagccgcagaccgtg
tttagtcacatccactaccatcgccacagacaccaccactacgaggagggggagcacagc
cccggcctgagcagaggttctgacgaggagcagggtgctgccgccgccgccgccgccgtc
gtcgccgctgcagctgttcctgttcccgccgctcctgctacacttgttgtgggcagagac
tctcctgtgttctctcctaaacacagcccctgtcagtgccccaaaccacaccccccagat
cgtctcagtccgggtcaggcagagtgtcaggaccaagaactcggcggttcttctgaacct
ccggttccactgtccccgatccccttacagctccctccccactgctgccaccagggaccc
gcacacccacatcctcctcgaatgggtggctgtgtgctggacggcccctctgtttgtttt
caccagagcctggatttgcaggataatcatagcatacacattcactacagccaggacaca
ggcttctgctgctcaccgcccgagctgcacccggctctgctcccggtccccctgattctg
gactctgggggggtggaggagtggccatgttgcagcggggctcacgtggtgtggcaaaag
agggtgcagcaggctcactctgagcctcaactgctggcccctggcccatccatggacagg
tctccctgcaggttccaccacgggccagggcctgagtgcaacacggacatttgtttatac
tgccaaacattacaccacaatcagggatcagaggaggagtccggtgtgtaa
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