Cynoglossus semilaevis (tongue sole): 103395199
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Entry
103395199 CDS
T04866
Symbol
cltc
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem04142
Lysosome
csem04144
Endocytosis
csem05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
103395199 (cltc)
04142 Lysosome
103395199 (cltc)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
103395199 (cltc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csem04131
]
103395199 (cltc)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csem04147
]
103395199 (cltc)
Membrane trafficking [BR:
csem04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
103395199 (cltc)
Exosome [BR:
csem04147
]
Exosomal proteins
Proteins found in most exosomes
103395199 (cltc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_PEP5_VPS11
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
103395199
NCBI-ProteinID:
XP_008331045
LinkDB
All DBs
Position
19:9427940..9449847
Genome browser
AA seq
1680 aa
AA seq
DB search
MAQILPIRFQEHLQLQNIGINPANIGFSTLTMESDKFICVREKVGEQTQVVIIDLADPNT
PIRRPISADSAIMNPASKVIALKDDAAKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNT
VALVTDTAVYHWSMEGDSQPVKVFDRHSSLAGCQIINYRTDAKQKWLLLIGISAQQNRVV
GAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPAT
GNQPFPKKAVDVFFPPEAQNDFPVAMQISAKHNVVFLITKYGYIHLYDLETGTCIYMNRI
SGETIFVTAPHEATSGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRLAVRNNLA
GAEELFARKFNNLFAAGNYPEAAKMAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYF
GILLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKAVDPTLALSV
YLRANVPNKVIQCFAETGQFPKIVLYAKKVGYTPDWIFLLRNVMRINPEQGLQFAQMLVQ
DEEPLADITQIVDVFMEYNLIQQCTSFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADA
ILGNQMFTNYDRAHIAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSL
SVEDSLECLRAMLSANIRQNLQICVQVASKYHEQLTTQSLTELFESFKSFEGLFYFLGSI
VNFSQDPDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVC
DRFDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKSLILVVRG
QFSTDELVAEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNNPERFLRENP
YYDSRVVGKYCEKRDPHLACVAYERGQCDQELINVCNENSLFKSLSRYLVRRKDPDLWAS
VLLETNPFRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVF
SEHRNLQNLLILTAIKADRTRVMEYISRLDNYDAPDIANIAISNELFEEAFAIFKKFDVN
TSAVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGLVKEAIDSYIKADDPSAYM
EVVQAADKSGNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHI
QQVGDRCYDEKMYEAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCF
ACVDGEEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFT
ELAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEFDNAIITM
MNHPTDAWKEGQFKDIITKVANVELYYKAIQFYLEFKPLLLNDLLIVLSPRLDHSRAVNF
FSKVKQLPLVKPYLRSVQNHNNKSVNEALNNLFITEEDYQALRTSIDAYDNFDNITLAQR
LEKHELIEFRRIAAYLFKGNNRWKQSVELCKKDKLYKDAMQYASESKDTELAEELLSWFL
MENKKECFAACLFTCYDLLRPDVVLETAWRHNIMDFSMPYFIQVMREYLSKVDKLETSES
LRKEEEQATETQPIVYGTPQLMLTAGPSVPVAPQQAYGYGYQAPAGYVQPAPQPGFGYGM
NT seq
5043 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatcctgcccattcgctttcaggagcacctgcagctccaaaacatagggatc
aatccagctaacattggctttagcaccctcactatggagtctgacaagttcatctgtgtg
cgggagaaggttggcgagcaaactcaggtggtgatcattgacttggccgaccccaacaca
cccatccgcagacccatttctgctgacagcgccataatgaatccagccagcaaagttatt
gcactcaaagacgatgctgccaaaactcttcagatcttcaacattgagatgaagagcaag
atgaaggcacacaccatgacagacgatgtcaccttctggaagtggatttccctcaacacc
gttgcacttgtgactgacactgctgtctaccactggagcatggagggtgattcacagcct
gtgaaggtctttgaccgccattccagcctggctggctgccagatcatcaactaccgcact
gatgcaaagcagaaatggcttctgctcattggcatctctgctcagcaaaatcgggtggtt
ggtgccatgcagctttactctgtcgacagaaaagtttcacagccaattgaaggacatgct
gccagttttgcccagttcaagatggagggcaacgcagaggagtcgactttgttctgcttt
gctgtcagaggccaagctggaggaaagttgcatattattgaagttggcaccccagcaaca
ggcaaccaaccatttccaaagaaagcagtggatgtgttcttccctccagaagcacaaaat
gacttccctgtggctatgcagataagcgccaaacacaatgtggttttccttattactaaa
tatggctatatacacctgtatgacttggaaacgggaacctgtatctacatgaaccgcata
agtggagagaccatctttgtcaccgctccacatgaggccacctcaggcatcattggggtc
aacaggaaaggacaggtattgtctgtgtgtgtggaagaagaaaacatcatcccctacata
acaaacgtactccagaatccagatcttgctctacgcttggcagtccgcaacaaccttgct
ggtgctgaggaactctttgcacgcaaatttaacaacttgtttgctgctgggaactaccct
gaggctgcaaagatggctgcaaatgcacccaagggtatcctgcgtaccccagacacgatc
cgacgcttccagagcgttccagctcagccaggtcagacgtcccccttgctgcagtatttt
ggaatccttttggaccagggtcagctcaataaatttgagtccctggagctttgcagaccc
gttctgcaacagggaagaaagcagctcctggaaaagtggctaaaggaagacaagttggag
tgctcagaagaacttggagacctggtgaaggcagttgatccaactttggctctcagtgtc
tacctgagggccaatgttcccaataaggtcattcagtgtttcgcagaaactggacagttc
ccaaagatagtcctgtatgccaagaaggtgggctacactcctgattggatttttttgctg
agaaatgttatgcggataaacccagaacaaggccttcagtttgcccagatgttggtccag
gatgaagagccgctagctgatatcacacagattgttgatgtgttcatggagtacaacctg
atccagcagtgcacttcatttctcctggatgctttaaaaaacaacagaccatcagaagga
ccgctgcagactcgattgctggagatgaacctgatgcatgctccacaggttgcagatgct
atcctgggtaaccagatgttcaccaactatgaccgtgcccacattgcccagctctgtgag
aaagctggactcctgcaaagggcgctggaacactacactgacctctacgatattaagcgt
gctgtggttcatacacacctgctcaacccagagtggcttgtaaacttctttggctcgctg
tcggtggaagactctctggagtgccttagggctatgctgtctgctaacatccgccagaac
ctgcagatttgtgttcaggtggcctccaaataccatgagcagctcaccacacagtctctt
actgaactctttgagtctttcaagagttttgaaggtctgttctacttccttggttccatt
gtaaacttcagccaggatcctgatgttcacttcaaatacatccaagccgcctgcaagacc
gggcagattaaagaggtggagaggatctgcagagagagcaactgttatgaccccgaacgt
gtcaagaacttcctcaaggaagccaaactcactgaccagctgccactcattattgtctgt
gaccgcttcgactttgtccatgacctggtcctctacttgtaccgcaacaacctgcagaag
tacattgagatctatgttcagaaggtgaaccctagccgtttgcccgtggtgattggtggt
ctcctagatgtggactgctcagaggatgtcattaagagcctgatcttggttgtcaggggc
cagttttccactgatgaactggttgctgaggtggaaaaaagaaacagacttaagctgctg
ctaccttggctggagtctcgtatccacgaaggctgtgaggagcctgccactcataacgcc
ttggctaagatctatattgacagcaacaacaatcctgaacgcttccttagagaaaacccc
tactatgacagccgtgtggtaggaaagtactgtgagaaaagagaccctcatctggcctgt
gtggcctatgagagagggcagtgtgaccaggagctaataaacgtctgcaatgagaactcc
ctgttcaagagtctgtctcgttatctggttcgccgcaaagaccctgacctgtgggccagt
gtgctgcttgagaccaacccattcagaagaccactgattgaccaggtggtacaaacagca
ttgtcagaaacccaggacccagaggaggtgtcggtcacagtcaaggcctttatgactgca
gatctacccaacgagctcattgagctgcttgagaagattgtattggacaactctgtcttc
agtgaacacagaaatctgcaaaatctgctgatcctgacagcaatcaaagctgaccgcact
cgagtgatggagtacatcagcagactagacaactatgatgcacctgatatcgccaacatt
gccataagcaatgagctctttgaggaggcctttgccatctttaaaaagtttgatgtcaac
acctctgctgtgcaggtgctgatcgagcacattggcaaccttgaccgagcctatgagttt
gcagaacgctgcaatgagccagctgtgtggagccagctggctaaggctcagctgcaaaag
ggcctggtgaaggaggccattgactcctacatcaaagctgatgacccttctgcatacatg
gaggtggtccaggctgcagataagagtggtaactgggaagacctggtcaaatttctgcag
atggctcgtaagaaggcccgtgagtcctacgtagaaacagaactcatctttgctttggcc
aaaaccaaccgtctggcagagctagaagaattcattaatggacctaacaatgctcacatc
cagcaggttggtgatcgctgctatgatgagaaaatgtacgaggctgctaaactgctgtac
aacaacgtgtccaactttggtcgtttggcttcgaccctggtccaccttggagaatatcag
gcagctgtggatggtgctcgcaaggccaacagcacccgcacctggaaagaagtttgcttt
gcctgcgttgatggagaggagtttcgtttggcccagatgtgtggtcttcacattgttgtt
cacgctgatgagctggaggagttgatcaactattaccaagaccgcggttactttgaagag
ctgatcacaatgctggaggctgccctgggtttagaacgtgctcacatgggtatgttcaca
gaactggccatcctctactccaagttcaagcctcagaagatgagagaacacctggagctc
ttctggtccagagttaacataccaaaggttctgagagcagcagagcaggctcacctgtgg
gccgaactcgtcttcctgtacgacaagtatgaggagtttgacaacgccatcattacaatg
atgaaccatccaacagatgcctggaaagagggacagtttaaggacattatcaccaaggtg
gccaacgtggagctctactacaaagccatccagttctatctggagtttaagccattgtta
ctgaatgatttgctcatagtgctttctcccagactggaccactcacgtgctgtcaacttc
tttagcaaggttaaacagctgcccctggtcaaaccctacctgcgctcagtccagaaccac
aataacaaatcagtcaatgaagcacttaacaacctcttcatcacagaggaagactatcag
gcactgagaacatcaattgatgcctatgacaactttgacaacatcacactggctcaacgc
ttggagaagcacgagttgattgagttcaggagaattgctgcttacctctttaaaggcaac
aaccgctggaaacagagtgtggaactctgcaagaaggataagctctataaggacgccatg
cagtatgcatcagaatccaaagacacagagctggcagaggagctgctgtcctggttcttg
atggagaacaagaaggagtgtttcgctgcctgccttttcacttgctatgacctgctgcga
cctgatgtggtgctggagacagcctggaggcacaacatcatggacttttctatgccatac
ttcattcaggtcatgagggagtacctgagcaaggttgataaactagaaacctcagagtct
ctaaggaaagaggaggaacaggcaacagaaacacagcctattgtctatggcacacctcag
ctgatgctgacagctggtcccagtgtacctgtggcaccacagcaggcgtacggctacggc
taccaggcacctgcaggatatgttcagccagctcctcagcctggcttcggctatggcatg
taa
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