KEGG   Cynoglossus semilaevis (tongue sole): 103395227
Entry
103395227         CDS       T04866                                 
Symbol
rfc3
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
csem  Cynoglossus semilaevis (tongue sole)
Pathway
csem03030  DNA replication
csem03410  Base excision repair
csem03420  Nucleotide excision repair
csem03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:csem00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    103395227 (rfc3)
   03410 Base excision repair
    103395227 (rfc3)
   03420 Nucleotide excision repair
    103395227 (rfc3)
   03430 Mismatch repair
    103395227 (rfc3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:csem03032]
    103395227 (rfc3)
   03036 Chromosome and associated proteins [BR:csem03036]
    103395227 (rfc3)
   03400 DNA repair and recombination proteins [BR:csem03400]
    103395227 (rfc3)
DNA replication proteins [BR:csem03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    103395227 (rfc3)
  DNA Replication Termination Factors
   ELG1-RFC complex
    103395227 (rfc3)
Chromosome and associated proteins [BR:csem03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    103395227 (rfc3)
DNA repair and recombination proteins [BR:csem03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     103395227 (rfc3)
  Check point factors
   HRAD17(Rad24)-RFC complex
    103395227 (rfc3)
SSDB
Motif
Pfam: RFC_C RCF1-5-like_lid DNA_pol3_delta2 Rad17 AAA AAA_22 DUF2247 AAA_11 AAA_16 AAA_5
Other DBs
NCBI-GeneID: 103395227
NCBI-ProteinID: XP_008331092
UniProt: A0A3P8VYS8
LinkDB
Position
19:10357524..10360353
AA seq 356 aa
MSLWVDKYRPTSLGKLDFHKEQATQLKNLVQCGDFPHLLVYGPSGAGKKTRIMGLLRELY
GVGVEKLRIEHQTIVAPSKKKIEINTIASNYHLEVNPSDAGNQDRVVIQELIKTVAQSQQ
IQSSTQREFKVVLLTEVDRLTKDAQHALRRTMEKYMATCRLILCSNSTSRVIGPIRSRCL
AIRVPLPSTEEVCSVLTSVCKKEGLLLPPELAKRISEKSGRNLRKALLMCEACRVHQYPF
SVDQEVPETDWEVYLRETANAVVSQQSPQRLLEVRARLYELLTHCIPPEIIMKGLVRELL
NNCDGQLKTEVSHMAAHYEHRLQLGNKAIYHLEAFTAKFMAMYKKFMEDGLDDMMF
NT seq 1071 nt   +upstreamnt  +downstreamnt
atgagtctgtgggttgacaaataccgtcctacctccctcggtaaactggactttcataaa
gaacaggcgactcagctgaagaacttggtccagtgtggagactttccacacttgttggtt
tatggtccatcaggtgcagggaagaagacacgcatcatgggtctgctgagggaactgtat
ggagttggagtggagaagctgcgcatcgaacatcagaccatcgtggctccatctaagaag
aagattgaaattaacacaatagcaagtaactatcacttagaagttaaccccagtgatgca
ggaaaccaggaccgcgtggtgattcaggagctgattaaaactgtggctcagtcacaacag
attcagtcgagcacccagagagagttcaaagtggtgttgctgacagaagtggaccgactc
accaaagacgcccagcatgctttgcgtcggactatggaaaaatacatggccacctgccgc
ctcattctctgctccaactccacctccagggtcatcgggccgattcggagccgttgtctg
gccatcagagttcctctgcccagcacagaagaggtttgtagtgttttgacatcagtctgc
aaaaaggaaggtctcctgctgcctcctgaactggccaaaaggatcagtgagaagtcagga
cgcaaccttcgtaaagctcttctgatgtgtgaggcctgtagagtgcaccagtatcccttc
tcagtagatcaagaggttccagagacggactgggaagtgtacctgagggaaacggccaat
gccgttgtgagccaacagagcccccagaggttgttggaggttcgagctcgactgtacgag
ctgctgactcactgcattcctcctgagatcatcatgaagggcctggtcagagagttgctg
aacaactgtgacggacagctgaagactgaagtctcccacatggcagcacattatgaacac
cggctgcagctgggcaacaaagccatctaccacctggaggccttcactgccaagtttatg
gccatgtacaagaagtttatggaagacggcctggatgacatgatgttttga

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