Cynoglossus semilaevis (tongue sole): 103395343
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Entry
103395343 CDS
T04866
Name
(RefSeq) rho guanine nucleotide exchange factor 12-like isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem04270
Vascular smooth muscle contraction
csem04625
C-type lectin receptor signaling pathway
csem04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
103395343
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
103395343
09153 Circulatory system
04270 Vascular smooth muscle contraction
103395343
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csem04131
]
103395343
Membrane trafficking [BR:
csem04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
103395343
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
RhoGEF
PH_16
PDZ
PDZ_6
PDZ_2
SOS1_NGEF_PH
PH
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
103395343
NCBI-ProteinID:
XP_008331232
LinkDB
All DBs
Position
19:complement(11933749..11956001)
Genome browser
AA seq
1472 aa
AA seq
DB search
MIIGRNTEDVVSIKWLETTKGSPMSVTQSTLTDRTPNILNNKDPGDKKPRNDKSAVSVKH
EFDPTGLVQRCVIIQRDENGFGLTVSGDNPVFVQLVKEDGAAMRAGVQTGDRIIKVNGTL
VTHSNHIEVVKLIKSGSYVALTVLGRPPGLPQIPLGEEEEDEEEDQKKAEEEEKEKEEED
EGSEVSPPLCLSPALPGVCGEQRSSWSSSSPQENSTSSLTDGSENRSTHNQRTDHSQRML
NKQLLELQMKEEECSRHPRPKLLKEIQEIKKQISLLQEQLGKEDVTVSRSGQPEDLDGRL
SVTSQADSVGDRILTNNNSPLPESPGRRETPCQSPDVGRRDIVNLCSMPDSEDNTDTDCS
AQCIVGSPPYLLNPQIIGAEDDYFDCQQEQINGQCSCFQSLDLLKGRPAHLAVFLHHVVS
QFDPAPLLCYLYADMHKQTNAKESRRFFMEFHSLFMDRTANLKVPVPETVSAELEKRRLE
LIPEELCKHYTQVLQDALLPDLHKNLDDFRQKRSMGLTLAEDELSKLDVDPGREQSASEK
ECSCAEHIISKIEDILLTSLPTEEEKCQTMQYVILTYMKHLGVKVKEPRGLEHKRARINF
LPKIKKSIKSEKEGEEKVKKPRFPNILVPPRRLSRVDSTSVGKAMDINKQRSPKQSSQPA
LGALEQLDSSAGNSGRGRASQLSESSDTGSHLSLSATSPTHSSPTTQASDTSGQESDSNV
SPFPLQPRLSEGPLTGEQQDNVFSPINAQFDFSPSNLEQLQEEDQETFSRVDMQCAVTSA
DIQSEDDQGGEVECEGEPLNWQCLVSRGVLESLTPQEIKRQEVINELFYTERAHLRTLKV
MDSVFYQRLNRDGILSTEDIRHIFINLEEIVQLHVSVTEQMTAIRKRSETSVIDQIGDDL
LSWFSGEEEEKIKQAVGTFCSNQPSALELIKTKKKKDQRFHLFMQEAESNRLCRRLQLKD
LIPVEMQRLTKYPLLLENIARYTEDGEDKEKVKKAGECCKNILNHVNQAVKEAENKQRLE
DYQRRLDLSSLKQSENPMILELKNLDLTKRIMVHEGPLLWKVNKDRKIELYALLLEDILV
LLQKQDERLVLKFHGKNPASAADTKHVFSPVIKLNTVLVRPVATNNKSFFVLSMSDNGAQ
IYELTAQTVSDRRRWQCLITQCAEAMKAKPHSSVTAVVQSEAEQDAIEIINHGKDPSETS
SSGEKDTTSSADIEASPSSINPFNGLKSEDEEEELTVAERQEEEEEEEEELDEAELEAFL
DGKLAERLQQEESCRNQEAEGLGLGPPTSKAEEALQTLALLKNTLFNHMLSREAEEEKEE
TLVQKRIRGFEQNDSSAESPACPPAACEENQSSTSSQKDEPQVSSGHTGLSETTEHNGGF
LVLDFNVGSEESSTDDDGGFAIDAGIDMRKLLSSSSQTGGTGPNLSRQLMTHLRLLQADL
QHLKEVELKYNEMRQMHSDPTTDSEDNNDGIQ
NT seq
4419 nt
NT seq
+upstream
nt +downstream
nt
atgataataggaagaaatactgaagatgttgtttcgataaagtggttggaaactacaaag
ggaagcccaatgagtgtcacacagtcaacactcactgacaggaccccaaacattctcaac
aacaaggaccccggagacaagaaaccaagaaatgacaaatcagctgtttcagtcaaacat
gaatttgatccaacaggtctggtccagcgctgtgtgataatccagagagatgaaaatggc
ttcgggctgacggtgagcggagacaaccctgtgtttgtgcagctggtcaaagaagatgga
gcagccatgcgagctggtgttcagacaggagaccggatcataaaggtcaatgggacctta
gtcacacattcaaaccacattgaggttgtaaagctgataaaatccggctcgtatgtagcc
ctcaccgtgctggggaggcctcctggtctccctcagatccccctgggggaagaggaagag
gacgaagaggaggaccagaaaaaggcagaggaggaggagaaggagaaggaggaggaggat
gaaggttcagaggtcagcccacccctctgtctctcacctgcgctgcctggtgtatgtgga
gagcaacgcagctcatggagcagcagcagtcctcaggagaacagcacctcctctctgact
gatgggagtgagaacaggtccactcacaaccaaaggactgaccactcacaaaggatgttg
aacaaacagctgctggaattacagatgaaggaggaggagtgcagcaggcacccacgaccg
aagctactgaaggagatccaggagataaagaagcagatctcactgctacaggagcagctg
ggcaaagaggatgtgaccgtgtccaggagtggacagccggaggatttggacggtagactc
tcagtgacctcacaagcagacagtgtcggtgacaggatcctcactaacaataactctccc
ctcccagaaagtcctggcagaagagagacgccctgtcagagcccagacgttggacgaaga
gacatagtcaacctctgctcgatgcctgactcagaggacaacactgatacggactgcagt
gcccagtgcattgtgggtagccctccctacctcctgaacccccagatcattggagcagaa
gacgactactttgactgtcagcaggagcagattaacggacagtgcagctgtttccagagt
ttagatttgctcaagggccgaccggctcacctcgcagttttcctccatcatgtggtctct
cagttcgaccctgcgccgttgctgtgttacctctacgctgacatgcacaagcaaaccaat
gccaaagaaagcagacgcttcttcatggagttccactctctcttcatggaccgaactgcg
aatctgaaagtaccagtgccagagacagtctcagcagaactagagaagaggagactggag
ttaataccagaggaactctgcaaacactacactcaggttttacaggacgctctcctacca
gaccttcacaagaacctggacgacttcagacagaagcgcagtatgggtctgactctggct
gaggacgagctgtccaaactggacgtggatccaggtagagagcagtcggcctcagagaag
gaatgttcctgcgcggaacacatcatctccaagatcgaagacattctgttgacatcactg
cccacagaagaagagaagtgccaaaccatgcagtatgtgattctcacatatatgaaacat
ctgggggttaaagtcaaggagccacgtggactcgaacataaacgagcacgaatcaacttc
ctgcctaagattaagaagagcatcaagtctgagaaggagggtgaggagaaggtgaagaaa
cctcgcttccccaatatcctcgtcccacccaggcgcctaagcagagtggactccacttca
gtcggtaaggccatggacattaacaagcagcgctcaccaaagcagtcctcgcagccggcc
ttaggggccctggaacagttggactcctctgccgggaattctggacgaggccgtgcaagt
cagctcagcgagagctcggacaccggctcccatctgtcactctccgccacctctcccacc
cacagctcccccaccactcaggcctcagatacgagtggacaagaatcagactcaaatgtg
tctccattccccctccagcccagactgagtgagggtccactgactggagagcagcaggat
aatgtcttcagtcccatcaacgctcagtttgacttcagtccctccaacctggagcagctg
caggaggaggatcaggagacgttcagcagggtggacatgcagtgtgcagtgacgtcagct
gacatccagagtgaggacgaccagggaggggaggtggagtgtgagggagagccactgaac
tggcagtgtctggtcagcagaggtgttctggagagtctcacgccgcaggagatcaaacgg
caggaggtcattaacgagctgttctacactgagagagcccacctgaggacactgaaggta
atggacagcgttttctaccagagactgaacagagacggaatcttgtccactgaggacatc
agacacatcttcattaacctggaggagatcgtccagctgcatgtttcagtaacagagcaa
atgacagcgataaggaaacggagtgagacgtcagtgatcgaccagatcggagacgatctt
ctgtcatggttcagcggtgaagaggaggagaaaatcaaacaggccgtcggtaccttctgc
agtaaccaaccgtctgctctggagctcatcaagactaagaagaagaaagaccagaggttc
cacttgttcatgcaggaagccgagagtaaccgtctgtgtcgacggctgcagctcaaagac
ctcattcctgtggaaatgcagcgactgacaaagtacccgctcctgctggagaacatcgcc
agatacacagaggacggtgaggacaaagagaaggtgaagaaagctggtgaatgctgcaag
aacatcctcaaccacgtgaaccaggctgtgaaggaggcagagaacaaacagaggttagaa
gactatcagaggagattagatctgtcctcactcaaacagagtgaaaacccaatgatcctg
gagctgaagaatctggacctgaccaagaggatcatggtccacgagggtcctctgctgtgg
aaggtcaataaagacagaaagatagagctttatgctctcctgctggaggacatcctggtg
ctacttcagaagcaggacgagcgtctggtcctgaagttccacggcaagaacccggcgagc
gctgcagacacaaagcacgttttcagccccgtcatcaaactcaacaccgtgctggttcgt
ccagtggccacgaacaacaagtctttctttgtgctctccatgtccgataacggcgctcag
atctacgagctgacggctcagacggtgtctgatcgcaggaggtggcagtgtctgatcaca
cagtgtgctgaggccatgaaggccaaacctcacagcagcgtcacagctgtggttcagtct
gaggctgaacaagatgccattgagatcatcaaccacggtaaagatcccagtgagacgtcg
tcaagtggagaaaaagacaccacctcctctgcagacatcgaagcctcaccttcgagcatc
aaccccttcaacggcctgaaatcagaggatgaggaggaggagctgactgtggcagagaga
caggaagaggaggaagaagaggaggaggagctggatgaagctgaactggaagccttcctg
gatggaaagctggcagagagactgcagcaggaggagtcatgtcgaaaccaggaggctgaa
ggactcggactcggacctccaacctccaaagctgaagaagctctgcagacattggcgttg
ctgaagaatacgctttttaaccacatgttgagccgagaggccgaggaggagaaggaggag
acactagtgcagaaaaggatcagagggtttgaacagaatgactcctcagctgagagtcca
gcgtgtcctcctgctgcctgtgaggagaaccagtcgtccaccagttcacagaaggacgag
ccacaggtttcctctggacacacaggcctgagtgaaaccactgaacacaatggtgggttc
ctggttctggacttcaatgtgggttctgaggagagcagcactgatgacgacggaggtttt
gcaattgatgctgggattgacatgagaaaactgctgtcctcgtcttcacagacagggggc
accggccccaacctcagcaggcagctcatgacgcacctgcgcctcctacaggctgaccta
cagcacctgaaggaggtggagctaaagtacaatgagatgaggcaaatgcacagtgaccca
acaaccgactcagaggacaacaatgatgggattcagtga
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integrated database retrieval system
