Cynoglossus semilaevis (tongue sole): 103395436
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Entry
103395436 CDS
T04866
Symbol
atg4c
Name
(RefSeq) cysteine protease ATG4C isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem04136
Autophagy - other
csem04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
103395436 (atg4c)
04136 Autophagy - other
103395436 (atg4c)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
csem01002
]
103395436 (atg4c)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csem04131
]
103395436 (atg4c)
03029 Mitochondrial biogenesis [BR:
csem03029
]
103395436 (atg4c)
Peptidases and inhibitors [BR:
csem01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
103395436 (atg4c)
Membrane trafficking [BR:
csem04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
103395436 (atg4c)
Mitochondrial biogenesis [BR:
csem03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
103395436 (atg4c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
TEBP_beta
Motif
Other DBs
NCBI-GeneID:
103395436
NCBI-ProteinID:
XP_008331374
UniProt:
A0A3P8WNS6
LinkDB
All DBs
Position
2:complement(6435026..6443371)
Genome browser
AA seq
473 aa
AA seq
DB search
MENKSSDEVEKFKTKFLSAWHNVRYSWALKTKTSFSRNSPVLLLGKCYHFKAEASDAEDF
TDICYEASDEDFVMGNVEAFRRDFASRVWLTYREDFPPLPGSTLTSDCGWGCMLRAGQMM
LAQALILQFLGRDWTWSGALMLQPLDTETWTTTTAKRLVATLEASLQSSLRSSDPEPQAQ
AVGEEADTHLKELNHRRLVSWFGDSHMAQFGLHRLVRSSLTMGKQAGDWYGPAVVAHILK
KAVEEATDPALACVAAYVSQDCTVYSADVIDSHRAPASGQSSADGSNASFPLHNSQPAPA
SGLPDDRAVIILVPVRLGGEKTNPEYFDFAKSILSLEYCIGIIGGKPKQACYFVGFQDDS
LIYMDPHYCQSFVDVSTSDFPLQSYHCPSPKKMPFSKLDPSCTIGFYSRNVQDFERIQQE
LSKLLQPSVKEKYPAFTFVQGHGRDYDLSAGLTPEKIRDPRRTVTTAGDFVLL
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggagaataaaagcagcgacgaggtcgaaaaatttaaaactaagttcttgtcggcctgg
cataatgtaagatacagttgggctctgaaaacaaagacgtcattcagcagaaattctcca
gttctgcttctgggaaagtgttaccattttaaggcagaagcttcagacgctgaggatttc
acagacatctgctatgaagcctcagacgaggacttcgtcatggggaacgtggaggctttt
cgcagggactttgcatctagagtgtggttgacctacagggaggactttcctccactgccc
ggctccaccctgacctccgactgtggatggggatgtatgctgagggctggacagatgatg
ctggcccaggcacttattctgcagtttttgggtagagattggacctggtcaggagcactg
atgctccagcctttagacacagagacgtggacaacaactacagctaaacgtttagttgct
actctagaggcttctctccagagttccctcaggtcgtctgatcctgagcctcaggcccag
gctgttggagaagaggctgacactcacctgaaagagttgaaccaccgcaggctggtgtcc
tggttcggggatagtcacatggcccagtttggtctccacaggctggtccgctctagtctg
accatggggaaacaggcgggtgactggtatggacctgctgtggtggcgcatattctcaag
aaagctgtggaggaggcgacagacccggccttggcgtgtgtagctgcctatgtctcccag
gactgtacagtgtacagcgctgacgtcatcgacagtcacagggcacctgcctcaggacag
agttctgctgacggatcgaacgcttcctttccattacacaacagccagccggccccagcc
tcaggtctgcctgacgacagagctgtcatcatcctggtccctgtcagactgggaggagag
aagacaaaccctgagtattttgactttgcaaagagcatcctgagcctggagtactgcata
ggtatcattggtgggaaacccaaacaggcctgttactttgtgggatttcaagacgacagc
ctgatttacatggaccctcattactgtcagtcttttgtggacgtcagcaccagcgatttc
cctctccagtcttatcactgcccttcaccaaagaagatgcctttcagtaagttggaccca
agctgcaccatcgggttctactccagaaatgttcaggactttgagagaatccaacaggag
ctgtctaagctgctgcagccgtctgtgaaagagaaatacccagcgttcactttcgtgcaa
ggtcacggcagagattacgacctgtcagcaggcctgaccccggagaagatccgtgacccg
aggagaacggtgaccactgccggagacttcgtgctgctttga
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