KEGG   Cynoglossus semilaevis (tongue sole): 103395544
Entry
103395544         CDS       T04866                                 
Symbol
thoc2
Name
(RefSeq) THO complex subunit 2
  KO
K12879  THO complex subunit 2
Organism
csem  Cynoglossus semilaevis (tongue sole)
Pathway
csem03013  Nucleocytoplasmic transport
csem03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:csem00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103395544 (thoc2)
  09122 Translation
   03013 Nucleocytoplasmic transport
    103395544 (thoc2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csem03019]
    103395544 (thoc2)
   03041 Spliceosome [BR:csem03041]
    103395544 (thoc2)
Messenger RNA biogenesis [BR:csem03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     103395544 (thoc2)
Spliceosome [BR:csem03041]
 Complex C
  Other components
   EJC/TREX
    103395544 (thoc2)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    103395544 (thoc2)
SSDB
Motif
Pfam: Tho2 THOC2_N Thoc2 RALGAPB_N
Other DBs
NCBI-GeneID: 103395544
NCBI-ProteinID: XP_008331504
LinkDB
Position
19
AA seq 1558 aa
MATLILPGEWFKNWEKSGKHEFVQLCKDLTEKKDHGSKNKDIQAALYELCWQAVRGTLKL
DHVSNVLGDMMELRDDMPSILADVFCILDLETGALEEKNKRDHYTALVGACMFFIPEAIL
KERLDPETLESLGLIKQALQFNQKIVKIKTKLFYKQQKFNLLREENEGYAKLITELGQDL
SSNITSHLVLESIKSLIGCFNLDPNRVLDIILEVYQSRCDQDEFFLALIKSYMCEPLTLC
HILGFKFKFYQEPNEETPKSLYHIAAALLNHKLIELEDLYVHLMPQDAVIVEEHKRDITE
AKQIARKLVMVVLPSEKNDDKEKEKEKEEDKNEKPPDNQKLGLLEALIRIGDWHHAQSIM
NQMPSFYATSHKAIALALCQLVHLTVEPLYRRSGVPKGARGCAVTPLKNQQAPKPAENFD
DLRRDTFSMLCYLGPHLSHDAILFAKIVRLGKGFMKEYQSELKSEKMETLLSCFLSIADQ
VLLPSLSLMECNACMSEELWGLFKLFPYQHRYRLFGQWKNETYSSHPLLVKVKAQTVERA
KYIMKRLTKENVKQSGRQIGKLSHSNPTILFDYMLSQIQWYDNLIVPVVDSLKYLTSLNY
DVLAYCIIEALANPEKEKMKHDDTTISSWLQSLASLCGAVFRKYPIELAGLLQYVTNQLK
AGKSFDLLILKEVVQKMAGIEITDEMTSEQLEAMTGGEQLKAEGGYFGQIRNTKKSSQRL
KDVLLDNELALPLCLLMAQQRNGVVFLEGGEKHLKLVGHLYDQCHDTLVQFGGFLASNLS
TEDYIKRVPSIDILCNQFHTPHDAAFFLSRPMYAHQITSKYDELKKADKGNRQQKVQKYV
AACEQVMAPVHEAVVSLHPPRVWDDLRPQFYATFWSLTMYDLAVPHSAYDREVNKLKVQI
KAIEDNQEIPMNKKKKEKERCTALQEKLQEEEKKQLEHVQRVLHRLKLEKDNWLLTKSTK
NETITKFLQLCLFPRCIFSSIDAVYCARFVELVHQQKTPNFCTLLCYDRVFSAIIYTVAS
CTENESHRYGRFLCCMLETVTRWHSDRAIYEKECVNYPGFLTIFRATGFDGGNKADQLDY
ENFRHVVHKWHYMLTKASVHCLETGDYTHIRNILIVLTKILPCYPKVLNLGQALECRVHK
ICLEEKDKRPDLYALAMGYSGRLKSQKVHMVPENEFHHKEQPARSATPASQQNGPGSTGK
PATGTSKTDEGTLEDGDRGKDKSQGTTKPVNKANSAAAKVTTSNGNGALNSTKVGKERDD
KDKSGKEKKEKKEKTPGSTPEMKAENRREKQREERAGKDERVLREGKEKTPKTDREKAKV
EEKSSKDDKAKAGNGEPMELSRERDAIKETKSKEKGDRVAVVGSLKSPALRSESAERDHK
RRKLDSHSSPSHSSTVKDNSNELKESASKHHINYNSVSRSKSRERETEKKESENARGRSK
ERKEEKDRKDRKRDHAAGERETSQESKRRKEENGTNSSKNSKSTSPSCDSPLSGEKEKSK
RSKSSSKEKTLNVKPERTSTGGKKESRHDKEKSEKKEKRDSSGGKEEKKHHKSSDKHR
NT seq 4677 nt   +upstreamnt  +downstreamnt
atggcgacgcttatcctccccggtgaatggttcaaaaactgggagaaatcgggaaaacac
gaatttgtacaactctgcaaagacctgacagagaaaaaagaccatggaagtaagaataaa
gatatacaagccgccttatatgagctctgctggcaagctgtaagagggaccctgaagttg
gaccatgtctccaatgtcctcggggacatgatggaactccgagatgacatgccatcaatt
ttagcagatgttttctgtatcctagatttagaaacgggggcactggaagaaaaaaacaag
cgtgatcattacacagcgttggtgggagcatgtatgttttttattccagaggccattcta
aaggagaggctggatccagaaaccctggagtctctgggtcttataaaacaagctcttcag
ttcaatcagaagattgtaaaaatcaaaaccaagctcttttacaagcaacagaagtttaat
ttgctgcgggaggagaatgaaggctacgccaaactaatcacagagctgggacaggacctg
tcaagcaacataaccagtcatctagtcctagagagcatcaagtcactgataggatgtttc
aacctcgatcccaatcgtgtgttggacataatcctggaggtttaccagagtcgatgtgat
caagacgagttcttcctggctctcatcaaatcctacatgtgtgagccgctcaccctctgc
cacatcctgggcttcaaattcaagttttatcaggagcccaatgaggaaaccccaaagtca
ctttaccacatcgctgctgctctgctgaatcacaaactgatagagctggaagatctttat
gtacatctcatgccacaggatgccgtcatcgttgaggaacataagcgtgacatcacggaa
gccaagcagattgcgcgtaaactggtcatggttgttttaccctcggagaagaatgacgac
aaggagaaggaaaaggagaaagaagaagacaagaatgagaagccgcctgataaccagaag
ctcggtcttttggaagctctgatcagaattggagactggcatcacgcccagagtattatg
aaccaaatgccgtccttctatgctacgtctcacaaggcgatcgcactggccctctgtcag
cttgtgcacctgactgtggaacctctctacagaaggtccggtgtcccaaaaggtgccaga
ggatgtgcagtgactcctctaaagaaccaacaagccccaaagcctgcagagaactttgac
gacctccgcagggacacgttcagcatgttgtgctaccttggcccccacctctctcacgac
gctattctttttgccaaaatagttcgtctgggcaagggttttatgaaagagtaccaaagt
gaactcaaatcagagaaaatggaaacacttctgagttgtttcctcagcattgcagaccag
gtgttgctgccttctctctcactcatggagtgtaacgcctgcatgtcagaggagctgtgg
ggcctcttcaaactgtttccctatcagcacaggtaccgtctgtttggtcagtggaagaat
gagacgtattccagtcacccactcttagttaaggtcaaggcacagactgtggagagggcc
aagtacataatgaagcggttgaccaaagagaatgtgaaacaatctggaagacagattggc
aaactaagccatagcaatcccacaatcctctttgattatatgctgtctcagatccagtgg
tatgacaacctcattgttccagtggtggactctttgaaatacctcacttcactcaactac
gacgtcttggcctattgcatcatcgaagctctagccaatccggagaaggagaagatgaaa
cacgatgacaccaccatctcgtcttggcttcaaagtctggcaagtttgtgtggagctgtg
ttcagaaaatacccaatagaattggccggacttcttcagtatgtcaccaaccagctaaag
gcagggaagagttttgacttgctcatcttgaaggaggtggtgcagaaaatggctggcatc
gagatcacagacgaaatgacctcagagcagttggaggccatgaccggaggggagcaactc
aaagccgagggaggctactttggtcagatcaggaacactaagaagtcatcacagcggttg
aaggacgtactgctggacaacgaactggccttacctctgtgtctgctcatggcacagcag
cggaatggtgtggttttcctcgagggtggagaaaagcatctcaaacttgttggccatctt
tatgaccagtgccacgacacgttggttcagtttggaggttttctggcctctaacctcagc
acagaggactacatcaaacgggttccttccattgacatcctgtgtaaccagttccacacg
ccacacgatgctgcgttcttcctgtcccggccgatgtatgcacatcaaattacctccaaa
tatgacgagctgaagaaggcagacaaaggaaaccggcagcagaaggtccaaaagtacgtg
gctgcctgtgaacaggtgatggcgccggtgcacgaggctgtggtgtctctccaccctccc
agggtttgggatgatctcaggcctcagttctacgccaccttctggtctctcaccatgtac
gatctggctgtgcctcactccgcctatgaccgtgaagtcaacaaactcaaggtccaaatc
aaagctattgaagacaaccaggaaataccgatgaataagaagaaaaaggagaaggaacgc
tgcacagccctgcaggagaaactgcaggaggaggagaagaagcagctggagcacgtacag
agagttctacaccgcctcaaactggagaaggacaactggttgttaacgaaatccactaag
aatgagaccatcacaaagttcctgcagctctgtctgttccctcgctgcatcttctcttcc
atcgacgccgtgtactgtgcacgttttgtggagctggtccaccaacagaagactcccaac
ttctgcacacttctgtgctatgatagggtcttctctgctatcatttacactgtggccagc
tgcacagaaaacgagtctcatcgctacggacgcttcctttgctgcatgctggagacggtg
acgcgatggcacagtgaccgagccatctacgagaaggagtgtgtcaattaccccggcttc
ctgaccatcttcagagcaacgggcttcgatggaggaaacaaagctgatcagttggactat
gagaacttcagacacgtggtgcacaaatggcactacatgctaaccaaagcttcagttcat
tgtttagagacgggggattatacgcacatccggaacattctcatcgtcctcaccaagatc
ctgccctgctaccccaaggtcctcaacctgggtcaggcactggagtgtcgcgtccacaag
atctgcctcgaggagaaggacaagaggccagacctttatgccttagcaatgggttattca
ggtcggttgaaaagccagaaggtgcacatggtccctgagaacgagttccaccacaaggag
cagccagcacgcagcgccactcctgccagccaacagaacggaccgggcagcacagggaag
cccgccaccggcacgagcaagacggacgagggaacgttggaggacggagatcgtggaaag
gacaaatctcaggggaccacaaaaccagtgaacaaagccaacagtgcagcggctaaagtg
accaccagcaatggcaacggggctctcaatagcaccaaagtcggaaaagaacgggacgac
aaagacaagagtgggaaagagaaaaaggagaaaaaggaaaagaccccgggaagcactcca
gagatgaaagctgagaaccgtcgggagaagcaaagagaagagagggcaggaaaggatgag
cgagtgctgcgtgagggtaaggagaagacccccaagacggaccgtgagaaagccaaggtg
gaggagaagagcagcaaagacgacaaggccaaggccggcaacggtgagcccatggagctg
tccagggagcgtgacgccatcaaggagaccaagagcaaggagaagggagacagagtcgcg
gttgtcgggtccctcaagtcaccagcgttgagatcggagtcggcagagagggatcacaaa
cgacgaaagctcgacagtcactcttctccgtcccactcctccactgttaaggacaatagc
aacgaactcaaggagtctgcgtccaagcatcacatcaactacaattcagtttcgcggtcc
aagagcagagagagggagacggagaagaaagagtcagagaacgcacgaggccgatccaaa
gagaggaaggaagaaaaagatcggaaagaccgcaaacgagaccacgctgcaggcgaacgc
gaaaccagccaagaatccaaacgtaggaaggaagagaacggaaccaattcctccaaaaac
agcaagagcacaagtccttcctgcgactctccactttctggcgagaaagagaagagcaaa
cggtccaaatcttccagtaaagagaaaacactgaacgtgaaaccggagcgaacgtccacc
ggaggcaaaaaggagtcccgtcatgacaaagagaaatctgagaagaaggagaagagggac
agcagcggcgggaaagaggagaaaaaacatcataaatcgtcagacaagcacagataa

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