Cynoglossus semilaevis (tongue sole): 103395544
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Entry
103395544 CDS
T04866
Symbol
thoc2
Name
(RefSeq) THO complex subunit 2
KO
K12879
THO complex subunit 2
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem03013
Nucleocytoplasmic transport
csem03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103395544 (thoc2)
09122 Translation
03013 Nucleocytoplasmic transport
103395544 (thoc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csem03019
]
103395544 (thoc2)
03041 Spliceosome [BR:
csem03041
]
103395544 (thoc2)
Messenger RNA biogenesis [BR:
csem03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
103395544 (thoc2)
Spliceosome [BR:
csem03041
]
Complex C
Other components
EJC/TREX
103395544 (thoc2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
103395544 (thoc2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
RALGAPB_N
Motif
Other DBs
NCBI-GeneID:
103395544
NCBI-ProteinID:
XP_008331504
LinkDB
All DBs
Position
19
Genome browser
AA seq
1558 aa
AA seq
DB search
MATLILPGEWFKNWEKSGKHEFVQLCKDLTEKKDHGSKNKDIQAALYELCWQAVRGTLKL
DHVSNVLGDMMELRDDMPSILADVFCILDLETGALEEKNKRDHYTALVGACMFFIPEAIL
KERLDPETLESLGLIKQALQFNQKIVKIKTKLFYKQQKFNLLREENEGYAKLITELGQDL
SSNITSHLVLESIKSLIGCFNLDPNRVLDIILEVYQSRCDQDEFFLALIKSYMCEPLTLC
HILGFKFKFYQEPNEETPKSLYHIAAALLNHKLIELEDLYVHLMPQDAVIVEEHKRDITE
AKQIARKLVMVVLPSEKNDDKEKEKEKEEDKNEKPPDNQKLGLLEALIRIGDWHHAQSIM
NQMPSFYATSHKAIALALCQLVHLTVEPLYRRSGVPKGARGCAVTPLKNQQAPKPAENFD
DLRRDTFSMLCYLGPHLSHDAILFAKIVRLGKGFMKEYQSELKSEKMETLLSCFLSIADQ
VLLPSLSLMECNACMSEELWGLFKLFPYQHRYRLFGQWKNETYSSHPLLVKVKAQTVERA
KYIMKRLTKENVKQSGRQIGKLSHSNPTILFDYMLSQIQWYDNLIVPVVDSLKYLTSLNY
DVLAYCIIEALANPEKEKMKHDDTTISSWLQSLASLCGAVFRKYPIELAGLLQYVTNQLK
AGKSFDLLILKEVVQKMAGIEITDEMTSEQLEAMTGGEQLKAEGGYFGQIRNTKKSSQRL
KDVLLDNELALPLCLLMAQQRNGVVFLEGGEKHLKLVGHLYDQCHDTLVQFGGFLASNLS
TEDYIKRVPSIDILCNQFHTPHDAAFFLSRPMYAHQITSKYDELKKADKGNRQQKVQKYV
AACEQVMAPVHEAVVSLHPPRVWDDLRPQFYATFWSLTMYDLAVPHSAYDREVNKLKVQI
KAIEDNQEIPMNKKKKEKERCTALQEKLQEEEKKQLEHVQRVLHRLKLEKDNWLLTKSTK
NETITKFLQLCLFPRCIFSSIDAVYCARFVELVHQQKTPNFCTLLCYDRVFSAIIYTVAS
CTENESHRYGRFLCCMLETVTRWHSDRAIYEKECVNYPGFLTIFRATGFDGGNKADQLDY
ENFRHVVHKWHYMLTKASVHCLETGDYTHIRNILIVLTKILPCYPKVLNLGQALECRVHK
ICLEEKDKRPDLYALAMGYSGRLKSQKVHMVPENEFHHKEQPARSATPASQQNGPGSTGK
PATGTSKTDEGTLEDGDRGKDKSQGTTKPVNKANSAAAKVTTSNGNGALNSTKVGKERDD
KDKSGKEKKEKKEKTPGSTPEMKAENRREKQREERAGKDERVLREGKEKTPKTDREKAKV
EEKSSKDDKAKAGNGEPMELSRERDAIKETKSKEKGDRVAVVGSLKSPALRSESAERDHK
RRKLDSHSSPSHSSTVKDNSNELKESASKHHINYNSVSRSKSRERETEKKESENARGRSK
ERKEEKDRKDRKRDHAAGERETSQESKRRKEENGTNSSKNSKSTSPSCDSPLSGEKEKSK
RSKSSSKEKTLNVKPERTSTGGKKESRHDKEKSEKKEKRDSSGGKEEKKHHKSSDKHR
NT seq
4677 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgcttatcctccccggtgaatggttcaaaaactgggagaaatcgggaaaacac
gaatttgtacaactctgcaaagacctgacagagaaaaaagaccatggaagtaagaataaa
gatatacaagccgccttatatgagctctgctggcaagctgtaagagggaccctgaagttg
gaccatgtctccaatgtcctcggggacatgatggaactccgagatgacatgccatcaatt
ttagcagatgttttctgtatcctagatttagaaacgggggcactggaagaaaaaaacaag
cgtgatcattacacagcgttggtgggagcatgtatgttttttattccagaggccattcta
aaggagaggctggatccagaaaccctggagtctctgggtcttataaaacaagctcttcag
ttcaatcagaagattgtaaaaatcaaaaccaagctcttttacaagcaacagaagtttaat
ttgctgcgggaggagaatgaaggctacgccaaactaatcacagagctgggacaggacctg
tcaagcaacataaccagtcatctagtcctagagagcatcaagtcactgataggatgtttc
aacctcgatcccaatcgtgtgttggacataatcctggaggtttaccagagtcgatgtgat
caagacgagttcttcctggctctcatcaaatcctacatgtgtgagccgctcaccctctgc
cacatcctgggcttcaaattcaagttttatcaggagcccaatgaggaaaccccaaagtca
ctttaccacatcgctgctgctctgctgaatcacaaactgatagagctggaagatctttat
gtacatctcatgccacaggatgccgtcatcgttgaggaacataagcgtgacatcacggaa
gccaagcagattgcgcgtaaactggtcatggttgttttaccctcggagaagaatgacgac
aaggagaaggaaaaggagaaagaagaagacaagaatgagaagccgcctgataaccagaag
ctcggtcttttggaagctctgatcagaattggagactggcatcacgcccagagtattatg
aaccaaatgccgtccttctatgctacgtctcacaaggcgatcgcactggccctctgtcag
cttgtgcacctgactgtggaacctctctacagaaggtccggtgtcccaaaaggtgccaga
ggatgtgcagtgactcctctaaagaaccaacaagccccaaagcctgcagagaactttgac
gacctccgcagggacacgttcagcatgttgtgctaccttggcccccacctctctcacgac
gctattctttttgccaaaatagttcgtctgggcaagggttttatgaaagagtaccaaagt
gaactcaaatcagagaaaatggaaacacttctgagttgtttcctcagcattgcagaccag
gtgttgctgccttctctctcactcatggagtgtaacgcctgcatgtcagaggagctgtgg
ggcctcttcaaactgtttccctatcagcacaggtaccgtctgtttggtcagtggaagaat
gagacgtattccagtcacccactcttagttaaggtcaaggcacagactgtggagagggcc
aagtacataatgaagcggttgaccaaagagaatgtgaaacaatctggaagacagattggc
aaactaagccatagcaatcccacaatcctctttgattatatgctgtctcagatccagtgg
tatgacaacctcattgttccagtggtggactctttgaaatacctcacttcactcaactac
gacgtcttggcctattgcatcatcgaagctctagccaatccggagaaggagaagatgaaa
cacgatgacaccaccatctcgtcttggcttcaaagtctggcaagtttgtgtggagctgtg
ttcagaaaatacccaatagaattggccggacttcttcagtatgtcaccaaccagctaaag
gcagggaagagttttgacttgctcatcttgaaggaggtggtgcagaaaatggctggcatc
gagatcacagacgaaatgacctcagagcagttggaggccatgaccggaggggagcaactc
aaagccgagggaggctactttggtcagatcaggaacactaagaagtcatcacagcggttg
aaggacgtactgctggacaacgaactggccttacctctgtgtctgctcatggcacagcag
cggaatggtgtggttttcctcgagggtggagaaaagcatctcaaacttgttggccatctt
tatgaccagtgccacgacacgttggttcagtttggaggttttctggcctctaacctcagc
acagaggactacatcaaacgggttccttccattgacatcctgtgtaaccagttccacacg
ccacacgatgctgcgttcttcctgtcccggccgatgtatgcacatcaaattacctccaaa
tatgacgagctgaagaaggcagacaaaggaaaccggcagcagaaggtccaaaagtacgtg
gctgcctgtgaacaggtgatggcgccggtgcacgaggctgtggtgtctctccaccctccc
agggtttgggatgatctcaggcctcagttctacgccaccttctggtctctcaccatgtac
gatctggctgtgcctcactccgcctatgaccgtgaagtcaacaaactcaaggtccaaatc
aaagctattgaagacaaccaggaaataccgatgaataagaagaaaaaggagaaggaacgc
tgcacagccctgcaggagaaactgcaggaggaggagaagaagcagctggagcacgtacag
agagttctacaccgcctcaaactggagaaggacaactggttgttaacgaaatccactaag
aatgagaccatcacaaagttcctgcagctctgtctgttccctcgctgcatcttctcttcc
atcgacgccgtgtactgtgcacgttttgtggagctggtccaccaacagaagactcccaac
ttctgcacacttctgtgctatgatagggtcttctctgctatcatttacactgtggccagc
tgcacagaaaacgagtctcatcgctacggacgcttcctttgctgcatgctggagacggtg
acgcgatggcacagtgaccgagccatctacgagaaggagtgtgtcaattaccccggcttc
ctgaccatcttcagagcaacgggcttcgatggaggaaacaaagctgatcagttggactat
gagaacttcagacacgtggtgcacaaatggcactacatgctaaccaaagcttcagttcat
tgtttagagacgggggattatacgcacatccggaacattctcatcgtcctcaccaagatc
ctgccctgctaccccaaggtcctcaacctgggtcaggcactggagtgtcgcgtccacaag
atctgcctcgaggagaaggacaagaggccagacctttatgccttagcaatgggttattca
ggtcggttgaaaagccagaaggtgcacatggtccctgagaacgagttccaccacaaggag
cagccagcacgcagcgccactcctgccagccaacagaacggaccgggcagcacagggaag
cccgccaccggcacgagcaagacggacgagggaacgttggaggacggagatcgtggaaag
gacaaatctcaggggaccacaaaaccagtgaacaaagccaacagtgcagcggctaaagtg
accaccagcaatggcaacggggctctcaatagcaccaaagtcggaaaagaacgggacgac
aaagacaagagtgggaaagagaaaaaggagaaaaaggaaaagaccccgggaagcactcca
gagatgaaagctgagaaccgtcgggagaagcaaagagaagagagggcaggaaaggatgag
cgagtgctgcgtgagggtaaggagaagacccccaagacggaccgtgagaaagccaaggtg
gaggagaagagcagcaaagacgacaaggccaaggccggcaacggtgagcccatggagctg
tccagggagcgtgacgccatcaaggagaccaagagcaaggagaagggagacagagtcgcg
gttgtcgggtccctcaagtcaccagcgttgagatcggagtcggcagagagggatcacaaa
cgacgaaagctcgacagtcactcttctccgtcccactcctccactgttaaggacaatagc
aacgaactcaaggagtctgcgtccaagcatcacatcaactacaattcagtttcgcggtcc
aagagcagagagagggagacggagaagaaagagtcagagaacgcacgaggccgatccaaa
gagaggaaggaagaaaaagatcggaaagaccgcaaacgagaccacgctgcaggcgaacgc
gaaaccagccaagaatccaaacgtaggaaggaagagaacggaaccaattcctccaaaaac
agcaagagcacaagtccttcctgcgactctccactttctggcgagaaagagaagagcaaa
cggtccaaatcttccagtaaagagaaaacactgaacgtgaaaccggagcgaacgtccacc
ggaggcaaaaaggagtcccgtcatgacaaagagaaatctgagaagaaggagaagagggac
agcagcggcgggaaagaggagaaaaaacatcataaatcgtcagacaagcacagataa
DBGET
integrated database retrieval system