Cynoglossus semilaevis (tongue sole): 103395652
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Entry
103395652 CDS
T04866
Symbol
nup98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103395652 (nup98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csem03019
]
103395652 (nup98)
03036 Chromosome and associated proteins [BR:
csem03036
]
103395652 (nup98)
Messenger RNA biogenesis [BR:
csem03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
103395652 (nup98)
Chromosome and associated proteins [BR:
csem03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
103395652 (nup98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
103395652
NCBI-ProteinID:
XP_008331636
UniProt:
A0A3P8VAB7
LinkDB
All DBs
Position
19:complement(16763986..16784262)
Genome browser
AA seq
1838 aa
AA seq
DB search
MFNKSFGTPFGGGTGGFGNTTFGQQNTAFGTAAGFGTSAFGTTTNTGGLFGSTQNKPGGL
FGSSTFSQPATSSTSTGFGFGATSGTSTSLFGNTATGTSGGLFSQPTNAFGATKPTTFGS
FGTSTSSGSGLFGSTNTTSNPFGGTTSLFGSAGFSATQQPGTTVKFNPPTGNDTMVKAGV
TTSINTKHQCITAMKEYENKSLEELRLEDYQAGRKGPTQMPAGTGSLFGPSTATSSATTG
LFGPTAPNTSFTFGPSKSTFGATATSGFSNTTGSLFGPPNVQPAGNFFKSFGATTTAPNT
SFSFGNTNTSTMGVFGNPAAPQPGLFGTPTSTATGFGTNSSLFGGATGFGTVGPQPSLFG
KTTAFGTTTTSAPSFGTGTGLFGTKPALTLGTGTNTSTFGFGATPAGGSLFGNKAATGGL
GAGLGTSFGGVGAGGASLFGANHNKLGTTLGTMGSFGATAFNTGTGSIGFGAAAQPVALA
DPNAAAAQQVLLQQQLSVLAYSPYGDSPLFRNPLSDPKKREERLKPTNPSAQKALTTPTH
YKLTPRPATRVRPKALSSSGSSKTQLFDGLDDDEPSLINGAFVPRKNIKKLVLKNVNNSQ
YNSHTEAEDVDDLASPSEYPQNGRSSLVEEEELRQLAGSSSRTDDDPEVTHFYVNPIAKP
IPQGRAHNNLQDTISELNMHKATRNGLELSSDDVSASLGEESLQEDGDEEQQEVQQEVQQ
EVQQEVQQSPHPAGIVLTRVGYYTLPSMQELAEMVDENGECVVENFTIGRKGYGSVFFPG
EVNVTGLNLDDIVHFRRKEVIVYPDDKNKPPQGEGLNRRAEVTLDGVWPNNKTTCTQIRS
PERLAEINYEGRLEKASRKQGARFLEYRPETGSWVFEVAHFSKYGLQDSDEEDDAALKVD
TKKLKMSVPPSKLPPFDKSSTQQQVAPQAQSTVVIDLPGGVAELDSDMADITQSYPTESM
LGEGEEVTELPLGETEMNAKLGGLISAGYENCISASSQLASTLGLNPHALQVMKASLFVE
DDEEMDLFQDRTAPRVTSDISSPRPLPAPQSRPSVGGLLQARFTSCLVSQFPDSPRLPPP
PTSLSQVSPAVGDSPHRPQWSKPASSFLLPPRVPEPTIRTVGVRRLGGPVPLKESVTLGK
GGLLMDAGLFMGRSFRVGWGPGWTLAHCGDGLSSRTSKQLELQELDPKTDFSFLPKPARN
KPLAQSPYKVVLERVQGLDSPVTKTGEEEEEDDYSQTILQRPLEICLEHSTISTTEESAC
PLVAPRPGVSALHQYAKWITELNDKHGHADALLRHWAEVWTLCEALWGRLSPADQDLDTN
ALSDYQQQLERRRTFSAWLSCGATSRVEEEVSVAGKGCHVEAIFSYLTGNRISEACQLAQ
KEGDHRLALLLSQAAGSQHCRDLLTLQLADWNRMQTELYVSEERLRIFTLLAGKPVWQSS
DSLVNVCGQLDWKRCVAVHLWFMLPPTASVADALDKYQAAFKGSGEGGRYACAPLPPYLE
EEEEEEEEDEESKRQLYDLCFHLLKLYSDRHYGLQQLLDPLTVTPQRLDYRLSWHLWGVL
QSLHYSHLSSARQGLLHTSYAAQLESAGLWHMAIFILLHIPEPGQRERAVREMLSLHCPL
RATEEFLRRERFLTERLLIPETWIHEAKATRARRHGDKQQEALHLYRAGHWNQCHRLVIQ
HLASDCIINDNHDFLLEFLEGLAVPEHSSSVQDWDTAGKVYLDYIRVVKGLQQIQQMENT
GYELERLYTDVTSLCGRIEHLPCATARDRLAQSEMAKRVANILRMVLSLQQGDSTSDSLG
LPLAQLAPHITRLPMPEDYALEELRGLTQSYLQQLFVR
NT seq
5517 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaagtcgtttgggacgcccttcgggggggggacaggtgggtttggcaacacc
acctttggacaacagaacacggcctttggaaccgccgcgggctttgggacgtctgcgttt
gggacgactactaacacaggaggactgtttggttctacacagaacaaacctggaggcctg
tttggctccagcaccttcagccagccggccacctcctccaccagcacgggctttggtttt
ggtgcgaccagcggcacatccaccagtctgtttggaaacacggcaacaggcaccagcggg
gggctcttctcccagcccaccaacgcctttggagccaccaaacccacaacctttggaagc
ttcggcaccagcaccagcagtggcagcggcctgttcgggtcaactaacaccacctccaac
ccatttggtgggaccacctccctgtttggaagcgccgggttctccgccacacaacagcca
ggaacgacggtgaaatttaaccctccaacaggaaatgacaccatggtgaaagctggtgtg
accaccagcatcaacaccaagcaccagtgcatcactgccatgaaggagtatgagaacaag
tctctggaggagctgaggctggaggactaccaggctggacggaagggccccacccagatg
cccgcagggacaggtagtctgtttggaccgtccacagccacgtccagcgccaccactgga
ctctttggccccacagcgcccaacaccagcttcaccttcggaccaagcaagagcaccttt
ggagcgacagccaccagtggtttcagtaacaccacagggagcctgtttggaccgcccaac
gtccaacccgccggcaacttcttcaaatccttcggtgcgaccaccaccgccccgaacacc
agcttctctttcggcaacaccaacaccagtaccatgggcgtgttcgggaacccggcggcg
cctcaaccaggcttgttcggaacgccgaccagcacggccaccggctttggaaccaacagc
agtctgtttggaggcgccacagggttcggaactgttgggccgcagcccagtttatttgga
aagaccacggcgttcggtaccaccaccaccagcgccccgtcatttggcacaggaaccgga
ctctttggcaccaaacccgcactcacgctcgggaccggcaccaacacctccacctttggt
tttggagcgacccctgctggagggagtttgtttggaaacaaggcggccaccggaggactg
ggggccgggctcggtaccagcttcggaggagtgggagcaggaggagcttctctgtttgga
gccaatcacaacaaactgggcacaacgctcggaactatgggaagttttggagcaacagca
ttcaacaccggaaccggcagcataggatttggtgccgcggcccagcccgttgctcttgca
gatccaaacgcagcagcagctcagcaggttctgctgcagcagcagctcagtgttctggcc
tactcgccctacggagactccccgctcttcaggaacccactgtcggaccccaagaagaga
gaggagcgactaaaaccgaccaatccctcggcccagaaggctctgaccacgcccacacac
tacaaactgacaccacgtcccgcaaccagagtccggcccaaggccctgtcctcgtccggc
tcctctaagacccagctctttgacggtctggacgacgacgaaccgtcgctcatcaacgga
gccttcgtgcccaggaaaaacatcaagaagctggttctgaagaacgtgaacaacagtcag
tacaacagtcacacggaggcggaggacgtcgacgacctggcgtctccctcggagtacccg
cagaatggacgcagcagcctggtggaggaggaggagctgaggcagctggctggctccagc
agccggacggacgacgaccctgaggtcacgcacttctacgtcaaccccatcgccaagccc
atcccacagggccgcgcccacaacaacctgcaggacaccatcagtgagctgaacatgcac
aaggcaaccaggaacgggctggagctgagcagcgatgacgtttctgcctctctgggggag
gagtctctgcaggaggatggagacgaggagcagcaggaggtgcagcaggaggtgcagcag
gaggtgcagcaggaggtgcagcagtctcctcaccctgcaggcatcgtcctgactcgggtg
ggttactacaccctcccctccatgcaggagctggctgagatggtggatgaaaacggagag
tgcgtggtggagaacttcaccatcggcagaaaaggatacggctctgtgttcttccccggg
gaggtgaacgtgacggggctcaatctggacgacatcgtccacttcaggcgcaaggaggtg
atcgtctaccccgacgacaagaacaaaccgccccagggggaggggctaaatcgtcgtgct
gaggtgacgctggacggagtctggcccaacaacaagaccacctgcactcagatcaggagt
cctgaacgtttggctgaaatcaactacgagggtcggctggagaaggcttcacgaaaacag
ggagcgcgcttcctggagtacagacctgagacgggctcctgggtctttgaggtggcccac
ttctccaagtacggcctccaggactctgatgaagaagatgacgctgcactaaaagtcgac
accaaaaagctgaagatgtccgtccctccgtccaagctgccaccgtttgataaatcctcc
acccagcagcaggtggcgccacaggctcagtccacggtggtcatcgatcttcctgggggc
gtggctgagttggacagcgacatggctgacatcacacagagctacccaacagagagcatg
ctgggagagggggaggaggtaactgagctgccattgggtgagacggagatgaacgccaaa
ctggggggtctgatctctgccggctacgaaaactgcatctcagcgtccagtcagctggcg
tccacgctgggcctcaacccccacgccctgcaggtcatgaaggcgtcgttgtttgttgaa
gatgatgaagagatggacctgtttcaggatcgcactgctccgagagtgacctctgacatc
tcctcgcctcgaccgctgccggcgcctcagagccgaccttcagtggggggtcttcttcag
gcccgttttacctcgtgcctcgtttctcagttcccagactccccccgtcttcctccccct
cctacatctctctcccaagtgtctcccgcagtgggtgactccccccaccgccctcagtgg
tcgaagccggcctcctcctttctgctcccccctcgagtccccgagccgaccatcaggacg
gtgggtgtgcggcggctgggtggccccgtccccctgaaagagtcggtgactctgggaaag
ggggggctgttgatggacgccggtctcttcatgggccggtcctttcgggtcggctggggt
cccggctggaccctggctcactgcggagatggtctgagttcaaggacctccaaacagctg
gagctgcaggaactggaccccaagacggacttcagcttcctgccaaaacctgccaggaac
aaaccactggctcagagtccttataaggtggtcctcgagcgggtccagggtctggactcc
cccgtgacgaagaccggtgaggaggaagaggaggacgattacagtcagactatactgcag
cgccccctggaaatctgtctggagcacagcaccatcagcaccacagaggagtctgcctgc
cccctggtggccccgcggcccggtgtgtcagcgctgcaccagtacgccaagtggatcaca
gagctcaacgacaagcacggacacgcagacgctctgctgcgacactgggccgaggtctgg
accctctgtgaggccctgtggggccgcctcagccccgcggaccaggatctggacaccaac
gccctcagtgactaccagcagcagctggagaggaggcggaccttctctgcctggctgtct
tgcggcgccacctccagggtagaggaggaggtgtctgtagcagggaaaggttgtcacgtg
gaggccattttcagctacctcacaggaaaccgcatcagcgaggcgtgtcagctcgctcag
aaagaaggtgaccaccgcctggcgctgctgctgtctcaggccgcgggctcgcagcactgc
cgtgaccttctgacccttcaactggctgactggaaccgcatgcagaccgagctgtacgtg
tcggaggagcgtctgcgcatcttcacgctgctggcgggaaaacctgtgtggcagtcgtcc
gactccctggtcaacgtctgcggccagctggactggaaacgctgcgtggccgttcatctg
tggttcatgctgcctccgaccgcctcggtggccgacgccctggacaaataccaagctgcc
ttcaagggctccggagaaggagggaggtacgcctgtgctccgctgcccccctacctggag
gaggaggaggaggaggaggaggaggatgaagagtccaaacgacagctgtacgacctgtgc
tttcatctgctcaaactctacagtgacagacactacggcctgcagcagctcctggaccct
ctgaccgtcaccccccagcgtctggactatcgtctgagctggcacctgtggggggtgctg
cagtctctgcactacagccacctgagctccgcccgtcaggggctgctgcacaccagctac
gccgcccagctggagagtgccggcctgtggcacatggccatcttcatcctgctgcacatt
cctgagccgggccagcgggagcgagctgtcagggagatgctgagcctacactgccccctg
agggcgacagaggagtttctgcgccgagagcgtttcctcacagagagactgctgatccca
gagacctggatccacgaagccaaggccacacgggcccgcagacatggagacaaacaacag
gaggcgctgcacctgtaccgagccggacactggaaccagtgtcaccgtctggtgatccaa
cacctggcctcagactgtatcatcaacgacaaccacgacttcctgctggagttcctggaa
ggtctggctgttcctgaacacagcagcagcgtccaggactgggacacagccgggaaggtc
tacctggactacatcagggtcgtcaagggtctgcagcagatccagcagatggaaaacact
ggttatgagttggagcgactctacactgatgtgacttcactctgtggcagaatcgaacac
ctgccctgtgccacagccagagaccgcctggcccagtcagagatggcgaagcgtgtcgct
aacatccttcggatggtgctcagtctgcagcagggcgactccacctctgactccctcggt
ctccccctggctcagttagcgccccacatcacccgactgccgatgcccgaggactacgcc
ctggaggagctgcgtggactgacgcagtcgtacctgcagcagctgttcgtcaggtag
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