KEGG   Cynoglossus semilaevis (tongue sole): 103395737
Entry
103395737         CDS       T04866                                 
Symbol
gemin5
Name
(RefSeq) gem-associated protein 5
  KO
K13133  gem associated protein 5
Organism
csem  Cynoglossus semilaevis (tongue sole)
Brite
KEGG Orthology (KO) [BR:csem00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csem03019]
    103395737 (gemin5)
   03041 Spliceosome [BR:csem03041]
    103395737 (gemin5)
Messenger RNA biogenesis [BR:csem03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     103395737 (gemin5)
   mRNA cycle factors
    P-body specific factors
     103395737 (gemin5)
Spliceosome [BR:csem03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   SMN complex factors
    103395737 (gemin5)
SSDB
Motif
Pfam: TPR_GEMI5 WD40_CDC20-Fz Beta-prop_THOC3 Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_RIG_2nd Beta-prop_EML_2 GEMI5_RBS WD40_Prp19 WD40 WD40_WDHD1_1st ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st Beta-prop_Aladin Beta-prop_WDR3_2nd EIF3I Beta-prop_TEP1_2nd Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd WDR55 Beta-prop_WDR36-Utp21_2nd Beta-prop_IFT140_1st Beta-prop_EML WD40_MABP1-WDR62_2nd WDR90_beta-prop_4th Beta-prop_WDR19_1st Beta-prop_RIG_1st Beta-prop_EIPR1 Beta-prop_HPS5 WD40_Gbeta Beta-prop_TEP1_C WD40_RFWD3 WD40_MABP1-WDR62_1st Beta-prop_DCAF4 Beta-prop_WDR41 Beta-prop_WDR75_2nd
Other DBs
NCBI-GeneID: 103395737
NCBI-ProteinID: XP_016896991
LinkDB
Position
19:16262434..16270467
AA seq 1520 aa
MFKRILPASPNWYSSRCSDVSSTGLLGVGAKNVIYLIQVSVSDCTVVGELLGHRDLVSGF
SFCHHPAQTQLCASASHDGTIRFWDSDSRSFLKEHAAHQSSVTAIDWSPLDKNLLVSGDE
KGIMVCHWFHTGETCSFFPEPRTIFCLSCSPHTWSCVAVGYKDGMIILIDVSKKGHVTNR
LRGHDDEIHSLAWCPQLGLDALCCPPEDGAVTRGESPAEGRMESYLSSGSKDQTLRIWNS
ANGKAVLTLKLPYLKRRGSAVDPSIKERLWLTVLWMKSRPGQVLSSCFSGELLHWDLNRS
GKQRWTVLGTSSEGQNHSRIVFNMSSVLLHNRELLVSTSMDREIKCWDLSCLDCCWTLPT
LGGFVYTLTFSPVGGANCLALGVGDNMIRVWNTLSTKSQYETKTFWQGIKSKVTALAWHP
KKEGTLAFGTDDGKVGIYEIFSNKPPQISSSYHRKTVYTLAWGPPVPPVTSVASGEKVSL
YSCAGEGIIYQHDPTKLNTDASDIDQLIRETNNIQHKLPPHSDLCWKPDGKVLAVGNEDG
SIDIYLSPRLRLLCSIQQHHKIINCLRWHPGHAPSAEVHALLASGSSNAVVFVHDLHSVL
ANRPEPPPVLTEPFRKLAGHTAKITGLAWSPHHDAQLVSVSYDGTAQVWDVLQEVAVANY
RGHMGYLLCVDWSPVDPDLVWTGGKDFTVQEWNVSEQEFSKPPKGKKLVELKEKKKMKKN
NKKSSAVRGAEPEEEKVLTAQEVSGDEEEGDVSSAGRKHTHTHTHTHTHTHTGRDLKTLF
KCFSLSFVVFTAQLSTRRTEPHDDRQLTQSHQHSLSDRVCVCVCVCVSVCVSDPVLLQQK
KKPRSLFPLTSSLNHGVREKLLQDCVTLAKLQHWTHQDQDQDQDHQETFRDLNPVEQWRD
PPPQGEPSHLHKSVQKDCSDSSLMLNLWFLSTAARAPPTTAADCVPGQGDLVHLGLFSDK
AALQRMFTSEEDTHLEAGHFDCVVYLRLWSGDLQGALQLAADRGELSDHLLSLAPMAGFK
TWQRTVDVYVQQLCRQQNFLKAASHLLSLNRVYEALELLKTHRFYREAVCLAKARLSESD
PLLQQLYNCWAAALEKDGHFSSAAKCLLAAGATFDAAKVLSRKSDASSLQAAADVARICG
EIALAQTLALRCSKELMVTQKWVAAQEVLRPYTALLVQQLILVVTELLTTTLEEAAIAIA
PGGVHHQWACHLTEHATLLERVKAVWTEHFGVSRQSSGRSGAAALLQDLQLVESPTLSVN
SALTQVLMMTSVHLTAAVLGWLQDNSGQLITGLWRAVTSLTDAGNFSVAAAVLKSLFPEG
ADISKQQETLGDADVAAVDSLQAIVLYHRLYERWWACPRPTDTIFDLRHDVISCSDRDQP
TDDVIRRDLCLLLSERHAALQANQRRAHEIQQHLSAMVTQHKHNRPTEPTSAAEDCGKCE
DQETFLSLSLKLTQTQRKVDQATDAVKMFPRPDVMECCLLLLNASRSLSISEELQLQAKE
LLQKYATSPHLMKASRRFLT
NT seq 4563 nt   +upstreamnt  +downstreamnt
atgtttaagaggatccttcccgcctctcctaactggtactcttcccgctgcagtgacgtc
agcagcacgggtttgttgggagttggagccaaaaacgtaatttacctgattcaggtgtct
gtcagtgactgcacggtggtgggtgaactgctgggccacagagacctggtgtcaggtttc
tccttctgtcaccacccagcgcaaacccaactgtgtgccagcgcttcccacgacggtacc
attcgtttctgggactctgactccagatccttcctgaaggaacatgcggctcatcagagt
tcagttacagccattgactggtctcctttggacaaaaacctgttggtctctggagatgag
aagggaattatggtctgtcactggttccacactggagagacctgcagcttcttccccgaa
ccaagaaccatcttctgccttagctgttctcctcatacctggagctgtgttgctgttgga
tacaaagatgggatgatcatcctgattgatgtgagtaaaaagggtcatgtgaccaaccgt
ctccgtgggcacgatgatgagatccactctctggcctggtgtccccagcttggtctagat
gccctctgctgtccacctgaggacggtgcagtcactagaggagagtctccagcagagggc
agaatggagtcttacttatcttctggcagcaaagaccagactctgaggatctggaactcg
gctaacggcaaagcggtgctgactttgaagcttccatatttaaagagacgaggttctgct
gtagacccatctatcaaggagcgtctgtggctcaccgttctgtggatgaagagcagacct
gggcaggttctgtccagctgcttcagcggtgagctgctgcattgggacctaaaccgatcc
ggaaagcagcgttggactgtgttggggacatcgtcagagggtcagaaccacagccggatc
gtcttcaacatgagctcagtcttgctgcacaacagggaactgctggtcagcacctccatg
gaccgagagatcaagtgctgggacctgtcctgtctggactgctgctggactcttcccacc
ctgggtgggtttgtctacacactgaccttctctcctgtaggtggtgctaactgtctggca
ctaggcgtcggggacaacatgatccgagtctggaacacgctgtccaccaagagccagtat
gagaccaagaccttctggcagggaatcaagtccaaagtcacagcgctggcctggcatcca
aagaaagaaggaactctggcgttcggaacagatgacggaaaagtcggaatctacgaaatt
ttttcaaacaagccaccgcagatctccagctcctatcacaggaagacggtatacacactg
gcctggggcccccccgtccccccagtgacatcagtagcatcaggagaaaaggtgtccctg
tacagctgcgcaggtgaaggcatcatttatcaacacgaccccacgaaactgaacacagac
gcaagtgacattgatcagctgatcagagaaaccaacaacatccagcacaagctccctcct
cacagcgacctctgctggaagcctgatggaaaagttctggcagttggaaatgaggacggt
tccatagacatctatttgtctccacggttacggttgctgtgcagcattcagcagcatcac
aaaatcatcaactgtcttcgctggcatcctggccacgccccctctgctgaagtccatgcc
ctgttggcttcagggtcaagtaacgctgtggtctttgttcacgatctgcactcagtcctt
gccaatcgtccagaacctccacccgttctgaccgaaccattccgtaagctagcaggtcac
acggcaaaaattacaggtttggcctggagtccacatcacgacgcccaacttgtcagcgtg
tcatatgatggtacagcacaggtgtgggatgtcctgcaggaagtggctgtcgctaactac
cgtggtcacatgggttacctgctgtgcgtggactggtctcctgttgatccagacctggtc
tggactggaggaaaggacttcacggttcaggagtggaatgtctcagagcaggaattcagc
aaaccgcccaaagggaagaagctggtggagctgaaagagaagaagaagatgaagaagaac
aacaagaagtcttcagccgtcaggggggcggagccagaggaagagaaggtgctgacagca
caggaagtgtcaggtgatgaggaggaaggtgatgtcagctctgcaggtaggaaacacaca
cacacacacacacacacacacacacacacacacacaggtagagatttaaaaactctcttc
aaatgtttcagtctcagcttcgtagtttttacagcccaactgtcaaccagaagaactgaa
ccacacgacgaccgtcaactaacccaaagtcaccaacacagtctcagtgatcgtgtgtgt
gtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtcagaccctgtgctcctgcagcagaag
aagaaacctcgttctctttttcctctcacgtcttctctcaaccacggagtcagagaaaaa
ctgctgcaggactgtgtcactttggccaagctgcaacactggacccaccaggaccaggac
caggaccaggaccaccaagagactttcagagacctaaacccagtagagcagtggagagac
ccgcccccccagggtgagccctcccatctacacaagtcagttcagaaagactgttctgac
tcatcactgatgctaaacctctggtttctgtccacagctgctagagcgccccctaccact
gctgcagactgtgttccaggacagggagacctggtccacctgggtctgttctcagacaaa
gcagctctgcagagaatgttcacttctgaagaggacactcacctggaggctggacacttt
gactgtgtggtttacctgcgtctgtggtctggagacctgcagggggcactgcagctagcc
gcagacagaggagagctgagtgaccacctcctgtccttggctcctatggccggcttcaag
acctggcagcggaccgtggatgtgtacgttcagcagctgtgtcgtcagcagaacttcctg
aaggcggcgtctcacctgctgtcactaaatcgagtctacgaggccctggaactgttgaag
acccatcggttctacagagaagcggtgtgtctggccaaggcccgtctgtctgagagcgac
ccgcttctacagcagctctacaactgttgggccgcggcgctggagaaagatggacatttc
tcctcggctgctaaatgcctcctggcagccggcgccactttcgacgcggctaaagtactg
agcagaaagagtgacgcgtcgtcgctgcaggctgcggctgacgtggcgagaatctgcggt
gaaattgctctggcacagacgttagcactgcgttgtagcaaagaactaatggtgacgcaa
aagtgggtcgcggcccaagaagttttgaggccgtataccgcgctgctagtccagcagctg
atcctcgtcgtcactgagcttctcaccacgacactggaggaggccgccatcgccatcgca
ccgggcggtgttcatcaccagtgggcgtgtcacttgacagaacacgccaccttactggag
cgtgtgaaagcagtatggacggagcactttggtgtgtcgcggcagtcgtcaggacgcagc
ggtgccgcggctctcctgcaggatctccagttggtggagagtccgactctgtccgttaac
tccgccctcactcaggttctgatgatgacgtcagttcacctgaccgctgccgtgctcggt
tggctgcaggacaacagtggtcagctgatcactggactgtggcgagcagtgacatcactg
acagacgcaggaaacttcagtgtggcggctgccgtcctgaaaagcctgtttcctgaaggc
gctgacatcagcaaacaacaggaaactcttggtgatgccgacgtcgcggccgtcgacagt
ctgcaggccatcgtcctttaccatcgtttgtatgagcgctggtgggcgtgtccaagaccg
actgatacaatctttgacctaagacatgatgtcatcagctgctcggacagagaccagccc
actgatgatgtcatcagaagggacctgtgtctccttctgtcggagcgtcacgctgccctg
caggccaatcagaggagagcacatgagatccagcagcatctgagcgccatggtaacgcag
cacaaacacaacagacccacagagccgacatcagcagcagaggattgtgggaaatgtgaa
gaccaggagacgtttctgtctctgtctctcaaactgacacagacgcagaggaaggtggac
caagcgacagacgctgtcaagatgtttcctcgtcctgacgtgatggagtgttgcctcctc
ctcctcaacgcgtccagatctttgtccatctccgaggagctgcaattacaggctaaagag
cttctgcaaaaatacgcaacaagtcctcacctgatgaaggcatcacggcgattcctgacc
tga

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