Cynoglossus semilaevis (tongue sole): 103395737
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Entry
103395737 CDS
T04866
Symbol
gemin5
Name
(RefSeq) gem-associated protein 5
KO
K13133
gem associated protein 5
Organism
csem
Cynoglossus semilaevis (tongue sole)
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csem03019
]
103395737 (gemin5)
03041 Spliceosome [BR:
csem03041
]
103395737 (gemin5)
Messenger RNA biogenesis [BR:
csem03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
103395737 (gemin5)
mRNA cycle factors
P-body specific factors
103395737 (gemin5)
Spliceosome [BR:
csem03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
103395737 (gemin5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_GEMI5
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_RIG_2nd
Beta-prop_EML_2
GEMI5_RBS
WD40_Prp19
WD40
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
Beta-prop_Aladin
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_IFT140_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
Beta-prop_RIG_1st
Beta-prop_EIPR1
Beta-prop_HPS5
WD40_Gbeta
Beta-prop_TEP1_C
WD40_RFWD3
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_WDR41
Beta-prop_WDR75_2nd
Motif
Other DBs
NCBI-GeneID:
103395737
NCBI-ProteinID:
XP_016896991
LinkDB
All DBs
Position
19:16262434..16270467
Genome browser
AA seq
1520 aa
AA seq
DB search
MFKRILPASPNWYSSRCSDVSSTGLLGVGAKNVIYLIQVSVSDCTVVGELLGHRDLVSGF
SFCHHPAQTQLCASASHDGTIRFWDSDSRSFLKEHAAHQSSVTAIDWSPLDKNLLVSGDE
KGIMVCHWFHTGETCSFFPEPRTIFCLSCSPHTWSCVAVGYKDGMIILIDVSKKGHVTNR
LRGHDDEIHSLAWCPQLGLDALCCPPEDGAVTRGESPAEGRMESYLSSGSKDQTLRIWNS
ANGKAVLTLKLPYLKRRGSAVDPSIKERLWLTVLWMKSRPGQVLSSCFSGELLHWDLNRS
GKQRWTVLGTSSEGQNHSRIVFNMSSVLLHNRELLVSTSMDREIKCWDLSCLDCCWTLPT
LGGFVYTLTFSPVGGANCLALGVGDNMIRVWNTLSTKSQYETKTFWQGIKSKVTALAWHP
KKEGTLAFGTDDGKVGIYEIFSNKPPQISSSYHRKTVYTLAWGPPVPPVTSVASGEKVSL
YSCAGEGIIYQHDPTKLNTDASDIDQLIRETNNIQHKLPPHSDLCWKPDGKVLAVGNEDG
SIDIYLSPRLRLLCSIQQHHKIINCLRWHPGHAPSAEVHALLASGSSNAVVFVHDLHSVL
ANRPEPPPVLTEPFRKLAGHTAKITGLAWSPHHDAQLVSVSYDGTAQVWDVLQEVAVANY
RGHMGYLLCVDWSPVDPDLVWTGGKDFTVQEWNVSEQEFSKPPKGKKLVELKEKKKMKKN
NKKSSAVRGAEPEEEKVLTAQEVSGDEEEGDVSSAGRKHTHTHTHTHTHTHTGRDLKTLF
KCFSLSFVVFTAQLSTRRTEPHDDRQLTQSHQHSLSDRVCVCVCVCVSVCVSDPVLLQQK
KKPRSLFPLTSSLNHGVREKLLQDCVTLAKLQHWTHQDQDQDQDHQETFRDLNPVEQWRD
PPPQGEPSHLHKSVQKDCSDSSLMLNLWFLSTAARAPPTTAADCVPGQGDLVHLGLFSDK
AALQRMFTSEEDTHLEAGHFDCVVYLRLWSGDLQGALQLAADRGELSDHLLSLAPMAGFK
TWQRTVDVYVQQLCRQQNFLKAASHLLSLNRVYEALELLKTHRFYREAVCLAKARLSESD
PLLQQLYNCWAAALEKDGHFSSAAKCLLAAGATFDAAKVLSRKSDASSLQAAADVARICG
EIALAQTLALRCSKELMVTQKWVAAQEVLRPYTALLVQQLILVVTELLTTTLEEAAIAIA
PGGVHHQWACHLTEHATLLERVKAVWTEHFGVSRQSSGRSGAAALLQDLQLVESPTLSVN
SALTQVLMMTSVHLTAAVLGWLQDNSGQLITGLWRAVTSLTDAGNFSVAAAVLKSLFPEG
ADISKQQETLGDADVAAVDSLQAIVLYHRLYERWWACPRPTDTIFDLRHDVISCSDRDQP
TDDVIRRDLCLLLSERHAALQANQRRAHEIQQHLSAMVTQHKHNRPTEPTSAAEDCGKCE
DQETFLSLSLKLTQTQRKVDQATDAVKMFPRPDVMECCLLLLNASRSLSISEELQLQAKE
LLQKYATSPHLMKASRRFLT
NT seq
4563 nt
NT seq
+upstream
nt +downstream
nt
atgtttaagaggatccttcccgcctctcctaactggtactcttcccgctgcagtgacgtc
agcagcacgggtttgttgggagttggagccaaaaacgtaatttacctgattcaggtgtct
gtcagtgactgcacggtggtgggtgaactgctgggccacagagacctggtgtcaggtttc
tccttctgtcaccacccagcgcaaacccaactgtgtgccagcgcttcccacgacggtacc
attcgtttctgggactctgactccagatccttcctgaaggaacatgcggctcatcagagt
tcagttacagccattgactggtctcctttggacaaaaacctgttggtctctggagatgag
aagggaattatggtctgtcactggttccacactggagagacctgcagcttcttccccgaa
ccaagaaccatcttctgccttagctgttctcctcatacctggagctgtgttgctgttgga
tacaaagatgggatgatcatcctgattgatgtgagtaaaaagggtcatgtgaccaaccgt
ctccgtgggcacgatgatgagatccactctctggcctggtgtccccagcttggtctagat
gccctctgctgtccacctgaggacggtgcagtcactagaggagagtctccagcagagggc
agaatggagtcttacttatcttctggcagcaaagaccagactctgaggatctggaactcg
gctaacggcaaagcggtgctgactttgaagcttccatatttaaagagacgaggttctgct
gtagacccatctatcaaggagcgtctgtggctcaccgttctgtggatgaagagcagacct
gggcaggttctgtccagctgcttcagcggtgagctgctgcattgggacctaaaccgatcc
ggaaagcagcgttggactgtgttggggacatcgtcagagggtcagaaccacagccggatc
gtcttcaacatgagctcagtcttgctgcacaacagggaactgctggtcagcacctccatg
gaccgagagatcaagtgctgggacctgtcctgtctggactgctgctggactcttcccacc
ctgggtgggtttgtctacacactgaccttctctcctgtaggtggtgctaactgtctggca
ctaggcgtcggggacaacatgatccgagtctggaacacgctgtccaccaagagccagtat
gagaccaagaccttctggcagggaatcaagtccaaagtcacagcgctggcctggcatcca
aagaaagaaggaactctggcgttcggaacagatgacggaaaagtcggaatctacgaaatt
ttttcaaacaagccaccgcagatctccagctcctatcacaggaagacggtatacacactg
gcctggggcccccccgtccccccagtgacatcagtagcatcaggagaaaaggtgtccctg
tacagctgcgcaggtgaaggcatcatttatcaacacgaccccacgaaactgaacacagac
gcaagtgacattgatcagctgatcagagaaaccaacaacatccagcacaagctccctcct
cacagcgacctctgctggaagcctgatggaaaagttctggcagttggaaatgaggacggt
tccatagacatctatttgtctccacggttacggttgctgtgcagcattcagcagcatcac
aaaatcatcaactgtcttcgctggcatcctggccacgccccctctgctgaagtccatgcc
ctgttggcttcagggtcaagtaacgctgtggtctttgttcacgatctgcactcagtcctt
gccaatcgtccagaacctccacccgttctgaccgaaccattccgtaagctagcaggtcac
acggcaaaaattacaggtttggcctggagtccacatcacgacgcccaacttgtcagcgtg
tcatatgatggtacagcacaggtgtgggatgtcctgcaggaagtggctgtcgctaactac
cgtggtcacatgggttacctgctgtgcgtggactggtctcctgttgatccagacctggtc
tggactggaggaaaggacttcacggttcaggagtggaatgtctcagagcaggaattcagc
aaaccgcccaaagggaagaagctggtggagctgaaagagaagaagaagatgaagaagaac
aacaagaagtcttcagccgtcaggggggcggagccagaggaagagaaggtgctgacagca
caggaagtgtcaggtgatgaggaggaaggtgatgtcagctctgcaggtaggaaacacaca
cacacacacacacacacacacacacacacacacacaggtagagatttaaaaactctcttc
aaatgtttcagtctcagcttcgtagtttttacagcccaactgtcaaccagaagaactgaa
ccacacgacgaccgtcaactaacccaaagtcaccaacacagtctcagtgatcgtgtgtgt
gtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtcagaccctgtgctcctgcagcagaag
aagaaacctcgttctctttttcctctcacgtcttctctcaaccacggagtcagagaaaaa
ctgctgcaggactgtgtcactttggccaagctgcaacactggacccaccaggaccaggac
caggaccaggaccaccaagagactttcagagacctaaacccagtagagcagtggagagac
ccgcccccccagggtgagccctcccatctacacaagtcagttcagaaagactgttctgac
tcatcactgatgctaaacctctggtttctgtccacagctgctagagcgccccctaccact
gctgcagactgtgttccaggacagggagacctggtccacctgggtctgttctcagacaaa
gcagctctgcagagaatgttcacttctgaagaggacactcacctggaggctggacacttt
gactgtgtggtttacctgcgtctgtggtctggagacctgcagggggcactgcagctagcc
gcagacagaggagagctgagtgaccacctcctgtccttggctcctatggccggcttcaag
acctggcagcggaccgtggatgtgtacgttcagcagctgtgtcgtcagcagaacttcctg
aaggcggcgtctcacctgctgtcactaaatcgagtctacgaggccctggaactgttgaag
acccatcggttctacagagaagcggtgtgtctggccaaggcccgtctgtctgagagcgac
ccgcttctacagcagctctacaactgttgggccgcggcgctggagaaagatggacatttc
tcctcggctgctaaatgcctcctggcagccggcgccactttcgacgcggctaaagtactg
agcagaaagagtgacgcgtcgtcgctgcaggctgcggctgacgtggcgagaatctgcggt
gaaattgctctggcacagacgttagcactgcgttgtagcaaagaactaatggtgacgcaa
aagtgggtcgcggcccaagaagttttgaggccgtataccgcgctgctagtccagcagctg
atcctcgtcgtcactgagcttctcaccacgacactggaggaggccgccatcgccatcgca
ccgggcggtgttcatcaccagtgggcgtgtcacttgacagaacacgccaccttactggag
cgtgtgaaagcagtatggacggagcactttggtgtgtcgcggcagtcgtcaggacgcagc
ggtgccgcggctctcctgcaggatctccagttggtggagagtccgactctgtccgttaac
tccgccctcactcaggttctgatgatgacgtcagttcacctgaccgctgccgtgctcggt
tggctgcaggacaacagtggtcagctgatcactggactgtggcgagcagtgacatcactg
acagacgcaggaaacttcagtgtggcggctgccgtcctgaaaagcctgtttcctgaaggc
gctgacatcagcaaacaacaggaaactcttggtgatgccgacgtcgcggccgtcgacagt
ctgcaggccatcgtcctttaccatcgtttgtatgagcgctggtgggcgtgtccaagaccg
actgatacaatctttgacctaagacatgatgtcatcagctgctcggacagagaccagccc
actgatgatgtcatcagaagggacctgtgtctccttctgtcggagcgtcacgctgccctg
caggccaatcagaggagagcacatgagatccagcagcatctgagcgccatggtaacgcag
cacaaacacaacagacccacagagccgacatcagcagcagaggattgtgggaaatgtgaa
gaccaggagacgtttctgtctctgtctctcaaactgacacagacgcagaggaaggtggac
caagcgacagacgctgtcaagatgtttcctcgtcctgacgtgatggagtgttgcctcctc
ctcctcaacgcgtccagatctttgtccatctccgaggagctgcaattacaggctaaagag
cttctgcaaaaatacgcaacaagtcctcacctgatgaaggcatcacggcgattcctgacc
tga
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