Cynoglossus semilaevis (tongue sole): 103396035
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Entry
103396035 CDS
T04866
Name
(RefSeq) inner ear-specific collagen-like
KO
K24214
otolin-1
Organism
csem
Cynoglossus semilaevis (tongue sole)
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
csem04990
]
103396035
Domain-containing proteins not elsewhere classified [BR:
csem04990
]
C1q domain-containing proteins
Adiponectin / short collagen group proteins
103396035
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GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
SelK_SelG
Motif
Other DBs
NCBI-GeneID:
103396035
NCBI-ProteinID:
XP_008332184
UniProt:
A0A3P8WIR4
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Position
20:complement(3501036..3505831)
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AA seq
505 aa
AA seq
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MISMHLLILTTLLVVLMGVLTSTARTTRSPKHQITKKPPRAGSSGGGGGGGGRLGRATTA
TAPPSSSQHAEETTEVLMDAFSQLPTDSTTYSNDVYSTEFHTDAIALPGNNNGNYTIDYN
ECFFNLCECCPPEKGPAGPVGETGPPGLPGETGPPGLPGEKGEIGPVGLPGPEGQPGDSG
LNGTTGEKGDQGPVGLPGVPGIPGEPGEKGDPGPIGEKGETGLTGIKGDPGELGEPGLNG
TKGSTGEVGPVGPPGINGTKGEKGEQGPTGVGVPGEKGDVGEQGPPGLSGEIGVPGLNGS
DGTKGEVGEVGPPGQKGDVGARGTPGPVGVRGLVGRKGERGLKGVRGPRGQKGEQGEGVE
LIRSAFSVGLFPSRSFPPPGMPVKFDKVFYNGEGHWDPSLNKFNITHTGVYLFTYHITVR
NRPVRVALVVNGIRKLRTRDSLYGQDIDQASNLALLQLNEGDQVWLETLRDWNGIYSSTE
DDSTFSGFLLYPELKPKPTAVENLL
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgatatccatgcacctcctcatcctcaccactctccttgtggtcctgatgggggtcctg
acttccactgcccgaaccacacgctcgcctaaacatcaaatcaccaagaagccaccaaga
gctgggagcagcggaggtggaggcggaggcggagggcgactcggtcgcgccaccacagca
acagcgcccccgtccagtagccagcacgcagaggagaccactgaggtcttaatggacgcc
ttctcccagttaccaaccgacagcaccacctactccaatgacgtgtactcaacggagttc
cacacagacgccatcgctctgcccgggaacaacaacggcaactataccattgactacaat
gagtgttttttcaacctgtgtgagtgctgtccaccagagaaaggtccggccggaccagtg
ggtgaaacagggccaccgggactaccaggagaaactggtccaccagggttgccaggtgaa
aaaggagagattggacctgtaggccttccaggtcctgaaggacaacctggagattctgga
ctaaatggtaccacaggtgagaaaggtgatcaaggacctgtaggccttcctggtgtccct
ggaattccaggagaaccaggagagaaaggtgaccctggccctatcggcgagaaaggtgaa
actggcctcactggtattaaaggtgacccaggagaactcggagaacctggactgaatggg
actaagggcagtacaggggaggtgggccctgttggtcccccagggattaatgggacaaag
ggagagaaaggtgaacaaggacccacaggtgtgggtgtaccaggtgagaaaggtgatgtg
ggtgaacaggggcctcctggtctgagcggtgagattggagtgccaggacttaatggcagt
gatggtacaaagggagaggttggtgaggtcggacctccagggcagaagggagatgttggt
gcgaggggcactccagggcctgtaggtgtgagaggtctggtagggaggaaaggggagaga
ggtctcaaaggtgtccgtggtcccagaggtcaaaaaggggaacaaggcgagggagtggag
ctgattcgctctgccttcagtgtggggttgttccccagcagatccttccctccccctggt
atgcctgtgaagtttgataaggtcttttataacggtgaaggacactgggacccttcactt
aacaagttcaacatcacccacaccggggtctacttattcacttaccacatcactgtgcgt
aacaggcccgtgcgtgttgccctggtggtgaatggcattcgaaagctgcgaactcgagat
tctctgtacggccaagatatcgaccaggcgtccaacctggctctgctgcagctgaatgag
ggtgaccaggtgtggctggagacgctgagagactggaatgggatttattccagcacagag
gatgacagcacgttctctggcttcttgctttacccagaattaaagcccaaaccaactgct
gtagaaaatctcttgtag
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