Cynoglossus semilaevis (tongue sole): 103396104
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Entry
103396104 CDS
T04866
Symbol
gtf2b
Name
(RefSeq) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103396104 (gtf2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csem03021
]
103396104 (gtf2b)
Transcription machinery [BR:
csem03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
103396104 (gtf2b)
Prokaryotic type
Archaeal type
TFB
103396104 (gtf2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Cyclin_C
KIF9
Sigma70_r4
RB_B
BRF2-like_C_cyclin_rpt
Auto_anti-p27
Motif
Other DBs
NCBI-GeneID:
103396104
NCBI-ProteinID:
XP_008332285
UniProt:
A0A3P8WSG5
LinkDB
All DBs
Position
20:complement(4481271..4485306)
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AA seq
318 aa
AA seq
DB search
MASTSRKDGLTLPRVTCPNHPEAILVEDYRAGDMICPECGLVVGDRVIDVGSEWRTFSNE
KALKDPSRVGDAQNPLLNGGDLTTMISKGTGAASFDEFGNSKYQNRRTMSSSDRAMLNAF
KEISTMADRINLPRNIIDRTNNLFKQVYEQKSLKGRANDAIASACLYIACRQEGVPRTFK
EICAVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNLGLPKQVQMAATFIARK
AVELDLVPGRSPISVAAAAIYMASQASAEKKTQKEIGDIAGVADVTIRQSYRLIYPRAAE
LFPPDFKFDTPVDKLPQL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaacaagccgcaaagatggtttgactcttcccagagttacgtgtccaaaccac
cctgaagctattctggtggaggactacagagcaggggacatgatatgtcccgagtgtggc
cttgtcgtaggtgacagagtaatagatgtgggctcagagtggcgaacattttctaatgag
aaagccctgaaagatccatccagagtaggagatgctcagaaccctctgctgaatggagga
gacctgaccacaatgattagcaagggaaccggtgcggctagttttgatgagtttggcaac
tccaagtaccagaaccgtcgaaccatgagcagctctgacagggccatgctcaacgcattc
aaagaaatcagcacaatggcagatcgcatcaacctgcccaggaacatcatagaccgaacc
aacaacctgttcaagcaagtttacgaacagaagagtctcaagggtcgagccaatgacgcc
atcgcttcagcgtgtctctacatcgcctgcagacaagaaggtgtaccaagaactttcaaa
gagatttgtgccgtctccaggatctccaagaaagagatcggtcggtgcttcaagctgatc
ctgaaggcactggagaccagcgtggacctcatcaccaccggcgacttcatgtcccgtttc
tgttcaaacctcgggctgcccaaacaagtgcaaatggcggccactttcatcgccaggaag
gccgtggaactggacctggtacccggcagaagcccaatctctgtggccgctgcagccatt
tacatggcctcacaggcctcagcagagaagaagacccagaaagaaatcggtgacattgct
ggagttgcagacgtcaccatcagacagtcctaccgactcatctacccccgggctgcagaa
ctgttccctccagatttcaagtttgacacaccagtcgacaagctgccccagctgtga
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