Cynoglossus semilaevis (tongue sole): 103396317
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Entry
103396317 CDS
T04866
Symbol
rb1cc1
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X2
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
103396317 (rb1cc1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csem01009
]
103396317 (rb1cc1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csem04131
]
103396317 (rb1cc1)
03029 Mitochondrial biogenesis [BR:
csem03029
]
103396317 (rb1cc1)
Protein phosphatases and associated proteins [BR:
csem01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
103396317 (rb1cc1)
Membrane trafficking [BR:
csem04131
]
Autophagy
Autophagosome formation proteins
ULK complex
103396317 (rb1cc1)
Mitochondrial biogenesis [BR:
csem03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
103396317 (rb1cc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
ubiquitin
Motif
Other DBs
NCBI-GeneID:
103396317
NCBI-ProteinID:
XP_008332575
UniProt:
A0A3P8VUY7
LinkDB
All DBs
Position
20:complement(7293568..7305941)
Genome browser
AA seq
1615 aa
AA seq
DB search
MKLYVFQVNNGSTLTFDTDLAVQTVLELKHAIQAKYKIAVQNQVLVVNGGECMSAERRVC
SYSAGTETNPIFLFNKEMILSDRDPTIPKTTFSIESEIQVKVEESLLMPAVFHTVASRTQ
LALEMFEVAKKLCSFCERLVHDEHLQHQGWAAIMANLDDCTLSYQKLLMKFDTAYASYQQ
DLEEIKVKLSRLGTAVSVMARIPLLESLTRHSYRESIEKSSSTPEKDSDETEEEKSTDSV
RCTSETQTKSSPCSASAAHTRETGNEQETSEMTDSGGLRAALLDDETEFTLSTFNVTLLD
WINVQDRPNDVESVVRKCFDSINRLEPRIIQPFLADCRDTIAKLDNQNMKAIKGLEDRLY
ALDQMIASCKKLVNEQKELAQGFLANQKRAENLKDTSVLPDLCVSHTNQLMIMLNNHKKL
LDIKKKCTTAKQELANNLQVRLKWCCYVMLHADQDSEKLQALLRLLMELRERVRIVEALS
TVPQMYCLAVVEVVRRKMFMRHYREWAHALVKDGKQLYEAEKYKRESFGKLFRKSFLRNS
LFRGLDSWPPTSFCTRKPRRFDDELPDISLDDLQYLKSSCPVEVQPFLMVPTMCDFEPLH
HHVGTLHHLVQAAQSVDEMSQTITDLLSEKQGSSCQSGQKSTESTPQSEGVPGRTTPVSP
KAPTSLSLQGPGCQPLQVPVPAPLEDLSPDSIDAQTFDFETIGHPNMDPVLQQGSIDLDS
LAESPESDFMSAVNEFVIEENMTSPNPISDPTSPDMMVESLYSSVINAIDNKRMQDTTIL
ERENSRINALQQVIDRYQSASEETHSRLRGVKDDLHHLRVTVTKEQHDLGLVLRSVTTQV
CTTVDNFCQTHELKLKEQHQVELLSVRQELEKQVQTLTEENQVNQNIVRDVQRAMLELEG
RMERKEKELAQFETERERWVETASNYKVQIENLEQAIRDRAEEIEMLSAAKDSLTGQLEN
LHFEIERGQQKIRQELEIVEQTHLKELEDRMKQEYKAQLETFTKSNQEALEHLVAENSAK
LNEAADLHASIFREKDNKIMDLEARVAELAELRCKVEVELALKESEIEEARVVFEEAKIL
QVQAAKSQVEAETKVLSQELAEIKRQLQAKNEEYEVDLAELRTLMRIEKDHCISELVDRH
EEETTVLHNELSALQQQVQEAERSHTELQQKLKLEVDQLVGLNTEKEKQLRSFQEVEQEL
RTVIDKLQTENNLLTKTPEQDTQANEGEVEKEEAAKEPSPDAFKELEQQKEEMERKLLEK
IKVLKSELQEVKSLKSDEGSPLHAEGCPVAAVPLSLDSALQERLQQERACLQSQLELLEK
KKNEEMQNLKTSLIAEQQTNFNTVLTREKLKKEQIINDLTEKLRKVSQQQEKDKALIETL
SEDRASVMQEKKHLEEELNRLRSTALVSSAFFTVNPAAHEVTEGGLAAARALPLVGAGFA
DCDTDRLASVAAIRDDDHVDSAVEASMVTVHDNIMMSEEKQRILLLEQTLHMKEEENKRL
SQRLMSQSMSSVSSRHSDKIAIRDFQVGDLVLIILDERHDNYVLFTVGPTLYFLHSESLA
ALDLKPASGTSRRPWVLGKVMEKEYCQAKKAQNRFKVPLGTKFYRVKAVPWNRRV
NT seq
4848 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgtatgtgttccaggtcaacaatggcagcacattgacatttgacactgatctt
gccgtccaaaccgtactggagctaaaacatgccatccaagccaaatacaagattgcagtt
caaaaccaagtccttgttgtcaatggaggagaatgtatgtctgcagagagacgagtttgc
agctacagtgctggcactgaaacaaaccccatttttctatttaacaaagagatgatttta
agcgaccgggatccaacgatccctaaaaccaccttctcaattgagagtgagattcaggtc
aaggtggaggagtctctattgatgccagctgtttttcacaccgttgcctctcgaacacaa
cttgctctggaaatgtttgaagttgccaagaaactctgctctttttgtgaacgtttggtg
cacgatgaacaccttcagcaccaaggctgggctgctattatggctaacctggatgactgc
actctgtcttatcaaaaattgcttatgaagtttgacacagcatatgcaagctaccaacaa
gacctggaagaaattaaagtgaaactgtcaagattagggacggccgtctctgtaatggcc
aggatacccctgcttgagagtttgacgagacacagttacagagagagcatagagaagtcc
agctcaaccccagagaaggattcagatgagacagaggaggagaagtccactgactcggtg
cgctgcaccagtgaaactcagaccaagtcgtcaccctgttctgcatcggcggcgcacaca
cgtgaaacaggcaacgaacaggaaacgagtgaaatgactgacagcggtgggctcagagct
gcactgttggatgacgagacagagttcaccttgtctactttcaacgtcactttgttggac
tggatcaatgtgcaagacagacccaacgatgtggaatcagttgttaggaaatgcttcgac
tccatcaatcggcttgaacctcggatcattcagccctttctggcagattgtagagacacc
attgccaagcttgataatcaaaacatgaaggccatcaagggactggaagacaggttgtac
gctttagaccaaatgatcgcaagctgtaagaagttggtgaatgagcaaaaagaactcgct
cagggatttttggccaatcagaagcgggctgaaaacctgaaggatacgtctgttctgccc
gacttgtgtgtgagccacaccaaccagctcatgatcatgctgaacaaccacaagaagctg
ctagacatcaaaaagaaatgcactactgccaaacaagaacttgcaaacaaccttcaagtc
agactcaaatggtgctgctacgtgatgctccatgcagaccaggacagcgagaaactccag
gctctgctcagacttttgatggagctgagggagagggtgagaatagtggaggctctcagt
accgtgccccagatgtactgtctggcagtggtggaagtcgtcaggaggaaaatgtttatg
cggcactacagagagtgggctcatgcacttgtgaaagatgggaaacaactgtatgaggca
gagaaatacaaaagagaatcctttggaaaactcttcagaaagtctttcctccgaaatagt
ttatttcgtggccttgactcgtggcctccaacatctttttgtacacgtaagccaagaagg
tttgacgacgagcttcctgacatctcacttgacgacctgcagtacttgaaatcttcttgt
cctgtggaggtgcaacctttcctcatggtcccaacgatgtgtgactttgaacccttacat
caccatgtaggcacacttcaccacctggttcaagcagcacaaagtgtagatgagatgtcc
caaaccataactgacctgctcagtgaaaaacagggctccagttgtcagagcggtcagaaa
tcaacagagtccacccctcagtctgagggtgtcccaggaagaaccacacctgtgtcaccc
aaagcccccacttctctaagcctacagggacctggatgccaaccactgcaagtcccagtc
ccagcccctctggaagacctgtccccggatagcattgatgcacaaacatttgactttgaa
accatcggccatcccaacatggatccagtcctgcagcagggttccattgaccttgattcc
ctggcagaaagtcccgagtctgacttcatgtccgctgtcaatgagtttgtgattgaggag
aacatgacttccccaaaccctatcagtgaccctaccagccccgatatgatggtagagtct
ctgtactcctcagtgatcaatgctatagacaacaagcgcatgcaggacactacaattcta
gaaagagagaattcaaggataaatgccctccaacaagtcatcgacaggtaccagtctgct
tcagaggagactcattccaggctgaggggagtaaaggacgacctccatcacttacgtgtc
acggtcacaaaggaacaacatgacctcggcttggttttgagaagtgtgaccacacaggtg
tgcacaacggtagacaacttctgtcagactcatgaactgaaactaaaggagcagcaccag
gttgagcttctctctgttcgacaggaactggagaagcaggttcaaacactaacggaggaa
aaccaagtcaatcagaatattgtcagagacgtccagcgtgccatgcttgagctggagggg
cgaatggagcgtaaagagaaggagctggctcagtttgagacagagagagagcgctgggtc
gagacggcgagtaactacaaagttcagattgaaaatctggagcaggcgattagagatcga
gctgaagagattgagatgctctcagctgccaaagattctctgactggtcagctggagaac
ctgcactttgagattgaacgtggtcagcagaagattcggcaggagctggaaattgttgaa
caaactcacctaaaagaactggaggacaggatgaagcaggaatacaaggcacaactggag
acttttaccaaaagtaatcaggaggctctggaacatctggtggctgaaaatagtgcaaag
ttaaacgaggccgctgatcttcatgcctctattttcagagagaaagacaacaaaattatg
gacttggaggcacgagttgctgaacttgcagaactgcgctgcaaggtggaggtggagctt
gctcttaaagagtccgagatcgaggaagcgagggtcgtatttgaggaggctaagatcctg
caggtccaggccgcaaagtctcaggttgaagccgagaccaaagtcctaagtcaagaattg
gcagagatcaaaaggcagctccaggctaaaaatgaggagtatgaagtggacctggcagaa
ctgaggactctgatgaggattgagaaggatcactgcatctcggagttggtggacagacac
gaggaggaaacaactgtactgcacaatgagctctccgctctgcaacagcaagtccaggaa
gctgagaggagccacactgagctgcagcagaaactcaaactagaagtggaccagctggtt
ggtctgaacacagaaaaagaaaaacagttgaggagcttccaggaagtagaacaagagctg
aggactgtcattgataaactgcagacagaaaacaacctgctcactaaaactccagagcag
gacacgcaagcaaatgagggagaggtggaaaaagaggaggccgccaaggaaccatcacca
gatgcctttaaggagttagaacaacagaaggaggaaatggaaaggaagttgttagagaaa
attaaagtgctcaagagtgaacttcaggaggtcaagtccctaaaaagtgatgaagggtcg
ccactacacgctgagggatgtccagtcgctgcagtaccgctgtccctggactcagcactt
caggagcggctgcagcaggagagggcgtgcctgcagtcccagctggagctcctggaaaag
aagaagaatgaggagatgcagaatctcaagacgtcattaatagcagagcagcagaccaat
tttaacacagtgttgacccgagaaaagcttaagaaggagcagatcatcaatgacctcact
gagaagttgaggaaagtcagccaacagcaggagaaggacaaagctctaatagagacactg
tctgaggaccgggccagtgtcatgcaggaaaagaaacacctggaagaggagctcaatcgc
ctgcgcagcacggcgcttgtctcctccgccttcttcacagtcaaccctgcagctcatgag
gtcacagagggcggactagctgcagccagagctctgcctttggttggagcaggttttgct
gactgtgacactgacagactggcctcagtagcagccatcagagatgacgaccatgtagac
tcagcagtggaagccagcatggtgacagtccatgataacatcatgatgtctgaggagaaa
cagcggattctcttacttgagcagactttacacatgaaggaagaggaaaacaagcgtctc
agtcaaagactgatgtctcaaagcatgtcgtctgtgtcatcacggcattcagacaaaatc
gccatcagagatttccaggttggcgatttggttctaatcatcctggacgaacgacacgac
aactacgtgctgttcacggtcggccccaccctttacttcctccattcagagtctctggct
gcactggacctcaaacctgcatcaggaacttcaagacgaccatgggtccttggaaaagtc
atggagaaggagtattgccaggctaaaaaggcccagaacagattcaaggttcctttaggt
accaagttctacagagtgaaagctgttccatggaacagaagagtatag
DBGET
integrated database retrieval system
