Cynoglossus semilaevis (tongue sole): 103396391
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Entry
103396391 CDS
T04866
Symbol
thoc1
Name
(RefSeq) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem03013
Nucleocytoplasmic transport
csem03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103396391 (thoc1)
09122 Translation
03013 Nucleocytoplasmic transport
103396391 (thoc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csem03019
]
103396391 (thoc1)
03041 Spliceosome [BR:
csem03041
]
103396391 (thoc1)
Messenger RNA biogenesis [BR:
csem03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
103396391 (thoc1)
Spliceosome [BR:
csem03041
]
Complex C
Other components
EJC/TREX
103396391 (thoc1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
103396391 (thoc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Death
Motif
Other DBs
NCBI-GeneID:
103396391
NCBI-ProteinID:
XP_008332676
UniProt:
A0A3P8W1S7
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All DBs
Position
20:8771024..8775380
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AA seq
659 aa
AA seq
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MAPSLFNFVDAKDKFTASAKAALTDKNSNSLLSVFNQLPGNETEKKTTLDQALRGVLGDQ
IVVKQVSCDDYLALIYLSIDCVKEGICSATTPFILLGDVLDCLPLDQCDKIFTFVEENVS
TWKSNNFYTAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQF
NLENITVFNKNEQESTLLQKAADEKEDGMEVEEGEMEEEDAPAPCSIPIDYNLYRKFWTL
QDYFRNPVQCYDKFSWMTFLKYSDETLAVFKSYKLDDMQASKRKLEELRASGGEHVYFAK
FLTSEKLMDLQLSDSNFRRHILLQYLVLFQYLTGQVKFKSSSLILNDDQSTWIEETTKLV
YQLLKEIPPDGDKFATMVEHILSTEENWNAWKNEGCPSFVKERTVDDKPKRPTRKRAAPE
DFLGKGPDRKIFMGNDELTRLWNLNHDNMEACKLESREFMPSLDEFFAEAIEQADPVNMV
EEEYKVVRNPNYGWRALRLLSRRSPHFFQPTNQKFKSLADYLDSMVSKLAKELPKDIPSE
EIKTGEEDDNDEDEDDNGDNLLKESNDSPSIQSKMVSNQQMDNVAAKLGAQWKTLATHLE
MKAAEMREIENDSEDEEMQAKLLLVAWQDREGSQATVETLITALNAAGFSQIAETLSEE
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgtccttgttcaattttgtcgatgcaaaagacaaattcacggcttctgccaag
gctgcacttactgataaaaacagcaattcgttgttaagtgtttttaaccagctaccgggc
aatgagaccgaaaagaaaaccactcttgatcaggctctgaggggtgttcttggagatcag
attgtcgtgaagcaagtgagctgcgatgactacctggctcttatctatctgagtattgac
tgtgtaaaagagggtatctgttctgccacaacacctttcattctgctgggagatgtactg
gattgcctacctctggatcaatgtgacaaaatattcacatttgtggaagagaatgtctcg
acatggaaatcgaacaacttctacactgctgggaaaaactacctgttaagaatgtgtaat
gatcttttgaggagactctccaaatctcagaacacagtattttgtgggagaatacagctt
ttcctggcacggctctttcctctgtctgagaaatcgggtctcaatctccagagccagttt
aatcttgaaaatataacagtttttaataaaaatgaacaggaaagtactctactacagaag
gctgcagatgagaaagaagatggaatggaggtggaagaaggagagatggaagaggaggat
gctcctgcaccttgctccattccgattgattacaacctgtacagaaagttctggacactg
caggactacttcaggaaccctgttcagtgttacgataaattctcctggatgacatttctg
aagtactcagatgagacattggcagtgtttaagagctacaagttggatgacatgcaggcc
tccaagaggaaactggaggagctgagggcatctggaggagaacacgtctactttgcaaag
tttctcacaagtgagaagctgatggatttgcagctcagtgacagtaatttccgacgacat
attctgcttcagtacctcgttctcttccagtacttgacaggtcaggtcaagtttaaaagc
tccagcctcatcctgaacgatgaccagtccacatggatcgaagagacaactaaactggtt
taccagctcctgaaagagattcctccagatggagacaagtttgccaccatggtggagcac
attcttagcacagaggaaaactggaacgcttggaagaacgaggggtgtccaagctttgtg
aaagagaggacagtagacgacaaaccaaaaaggccaacaaggaagagagcagctccggaa
gatttcctggggaaagggccagaccgtaagatcttcatgggaaatgacgaattaactcga
ctatggaacctgaaccacgacaacatggaagcctgcaagttggaaagcagggagttcatg
ccgtctctggatgaattctttgcagaagccatcgaacaggccgaccccgttaacatggtg
gaggaagagtacaaagttgttcggaacccaaactatgggtggcgggctctgagattattg
tccaggagaagtccacacttcttccaaccaacaaaccagaagttcaaaagcctggcagac
tacctggacagtatggtcagcaaactggccaaagaactcccgaaagacatcccatcggaa
gaaatcaagacaggtgaagaggatgacaatgatgaagatgaggatgacaatggcgataat
cttctcaaagaaagcaatgacagtccaagcatacagagcaaaatggtatcaaaccagcag
atggacaacgtagcagccaaactgggcgcccagtggaagacactggccacccacctggag
atgaaggcggcagagatgcgggagatcgaaaacgacagtgaagacgaggagatgcaggcc
aaactgctgctcgtggcctggcaggacagagaggggagccaggccacggtggaaactctg
atcacagctctgaacgctgcaggtttctctcagattgcagagactctcagtgaagagtag
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