Cynoglossus semilaevis (tongue sole): 103396497
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Entry
103396497 CDS
T04866
Symbol
ndc1
Name
(RefSeq) LOW QUALITY PROTEIN: nucleoporin NDC1
KO
K14315
nucleoporin NDC1
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103396497 (ndc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csem03019
]
103396497 (ndc1)
Messenger RNA biogenesis [BR:
csem03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
103396497 (ndc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
103396497
NCBI-ProteinID:
XP_016897998
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All DBs
Position
20:10204001..10210570
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AA seq
668 aa
AA seq
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MDAGEQSCWFIRKVIYWRAAASVAWAVLLLLPITAAFVVISRFSLFQPIYTITECFSLLM
STSAIFSLILLCGVILMVGFLNLEYYTVIPTIACSKIDLLGQLLHPRQLVNSFVHCIMGI
IVSWCCAVNLGGRYEALGHPCKQSNGXERKKGLHNXIKVILLAGAFVGFSHSLLGVMYNM
NYVSFHPVQQYKYLRFKGSLPLLVKCSATQAFYSVRNFIFFYFFLGYIPRAWICKTLSLH
LDPSMHTLDSVAGLLDLTLLYHLWISATFLLFTWYITLVLFRIFVTEGYSFPVHSTFTED
AHQCLPKVVHERQSMILKFLALQDLALLSKHSPSRRAEVFSLSQPGGHPHNWNSISQECL
CLLSDLTQRLVAYHDNVASNGRAKSISTGSERKTSSETSVVSGSEDLMSPRPTLLMKTPV
SVFARSTVGDVSLTAPFTPDLGSPFVSPTLRRLTAPIEQCSPWYGTVQSPHIMRRAPKLW
STSTDSQFNGSPSPSTATVCNPQQEALKPTLLAQFLQNRKEQVKNFMAKRVLIMYLFNKL
PEASSQALFADSQAYIWALEGLSYLVQASFSEDQFGVVQTTLPSILSCMLALQEAVDRHF
KLPHASSKPVRLTSSIGDSSYRTLRFALRATLKTAIYRITTTFGDHLNAVQMSAEHHKRL
QQFLEYKE
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggacgctggggagcagagttgttggttcatcagaaaggtgatttattggagagccgct
gccagtgttgcttgggctgttctgttgttactgcctattacagcggcttttgtagtcatc
agcaggttcagtcttttccagcccatatacacaataacagaatgtttttcactgctaatg
agcaccagtgccatattctcccttattctactttgtggagtgattcttatggtgggcttc
ctaaacttggagtattatacagttataccaaccattgcatgctcaaaaattgacctatta
ggacaactgcttcacccccgtcagttggtgaactcctttgttcattgcatcatgggaata
attgtgtcttggtgttgtgccgtcaaccttgggggtagatatgaagcgctggggcacccc
tgcaaacagagtaatgggtaagaaagaaagaaaggtttacacaactaaattaaagtaatc
ctgctcgctggagcatttgttggattttctcacagtcttctcggtgtgatgtacaacatg
aactatgtctccttccaccccgtccagcaatacaaataccttcgcttcaaaggatctttg
ccgttattggttaaatgcagtgctactcaagcattttactctgtcagaaacttcattttt
ttttatttctttttgggatacattccgagagcatggatttgtaaaacactcagtcttcat
ttagatccctccatgcacactcttgatagtgttgctggactgctggacctcactttactc
tatcacctgtggatcagtgccaccttcctcctctttacatggtacatcacattagtactg
ttcaggatctttgtcactgagggttacagttttcctgttcattcaacttttactgaagat
gcccaccagtgtctcccaaaagttgtgcatgaaaggcaatcaatgatattaaagtttctt
gctctgcaggacctggctcttctgtccaaacactctccatcccgacgagctgaagtcttc
agtctgagtcagccaggtggccatccccataactggaattccattagtcaggagtgtctg
tgtctgctgtctgatctgacacagagacttgtagcttatcacgacaacgtggcatccaat
ggcagagctaaatccatctctactggcagtgagaggaagacgtcatcagagacgtcagta
gtatctggttcagaagatttgatgagcccaaggccaactctgctgatgaaaactccagtt
tcagtttttgcccgctccactgtgggtgacgtttcactgacggcaccattcaccccagac
ttgggcagtccctttgtttcacccacactccgacgcctgactgctcccattgaacagtgt
tcgccatggtacggcacagtgcagagtccacacatcatgaggagagcaccaaaactctgg
tccacctccacagattcacagtttaacggcagcccctcaccatctactgccacagtttgc
aatccccagcaggaagcattaaaacccactctcctggctcagtttctccagaacagaaaa
gaacaggttaaaaatttcatggcaaaacgggtgctgataatgtatttgtttaacaagctt
ccagaagcctccagtcaggctctctttgctgacagccaggcttacatctgggctttagaa
ggattgtcttatcttgttcaagcctccttctcagaagaccagttcggagttgtacagacg
acattacccagcatccttagctgtatgctggcactacaagaggccgtggaccgtcacttc
aagctgcctcacgcctccagtaaacccgtcagactgaccagcagtataggagactcttct
tacagaacactgcgctttgccctcagggccacactaaagacggccatctacagaataaca
accacgtttggtgatcatttaaatgctgttcagatgtctgcagagcaccacaagagacta
cagcagttcctggagtacaaagaatga
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