Cynoglossus semilaevis (tongue sole): 103396586
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Entry
103396586 CDS
T04866
Symbol
chd8
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 8
KO
K04494
chromodomain helicase DNA binding protein 8 [EC:5.6.2.-]
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
103396586 (chd8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csem03036
]
103396586 (chd8)
Chromosome and associated proteins [BR:
csem03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
103396586 (chd8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
BRK
ResIII
HDA2-3
Chromo_MIT1
HTH_Hrp3
Motif
Other DBs
NCBI-GeneID:
103396586
NCBI-ProteinID:
XP_008332953
UniProt:
A0A3P8X504
LinkDB
All DBs
Position
20:11909226..11924742
Genome browser
AA seq
2592 aa
AA seq
DB search
MADPIMDLFEDTPLFNLDALPDDSFSQGSTDPVEEALKLALGQVDPPTEPEPTVELADNS
ALSVPVAAPSIPDPAPVQVHVQQSIPMATAQTVSMAEASTVAPTLAPSDALPQIQAQNNI
SIASNTSGVSCSTVLLSSPLAVSSSPATTTATTSQLAQITHQLTPQQLAAIAQQAGGKIV
ILKGPQGQAQVLQTVSGATSQTTGKVIRVLSGTPLKPGMSILQGGTVLSQASPGQAQVKV
GTGVQRLLQSPNGPVKQLLLTSMPQQTQGQQVQVQIPTQAQVAQGQTQVQVQPQAQIQVQ
GQAAQIHVQPQGQTAQIQVQTQSQVQLQPAMQAHTQGGEPKRITLVLQQPSQTGSVATVG
QTITTQQSVTQVQTAQGGQPQTPTRLVLGQLPGGKLVLQGSQIAALAQARAGQAGGQPKV
LTIQLQVQQQPNQQGGVKYQLVSGAGNAGSPQVLQISQGQPGQRVAVPLKMLLQPQTSSA
SSAGGTVSVVKVINSSPAGPSTTTTSTCPTQTIRIAKAPGEPASVRRVEILCKQEKANRI
VAEAIARAKARGEKNLPRVLNQDELPSSQTSPEMGGTITLVSASKKKSSGGGSKKKTPVS
GGAMAKVVCGGDKKGKVKSPGGTPGVATGIVTPGCASKSKSKTKTNTITLVGAKKRKRNG
SSDHSDGELSPASPTALEDDMIMKRRSNRVVKRKKYTEDLDIKITDDEDEQEDVDVTTTA
AAVASISCNSATQLKQEMELDADGLPSMQFFVENPSEEDAAIVDKVLSMRLTKKEVSQGQ
YTNVEEFFVKYKNYSYLHCEWASLDQLEKDKRIHQKIKRFKTKHAQMRHIFQEEEEPFNP
DYVEVDRILDESHSVDKDNGEPVIYYLVKWCSLPYEDATWELKEDVDEGKVEEFSKIQNR
QPRVKRAPRPPAASWKKLEETREYKNGNILREYQLEGVNWLLFNWYNRQNCILADEMGLG
KTIQSIALLSEIHGAGIQGPFLVIAPLSTITNWEREFSTWTNMNAIVYHGSLASRQMIQQ
YEMYCKDDKDHLIPGAYKFDALITTFEMVLSDCPELREISWRCVIIDEAHRLKNRNCKLL
DSLKMLDLEHKVLLTGTPLQNTVEELFSLLHFLEPAQFPSETEFLRDFGDLKTEEQVQKL
QAILKPMMLRRLKEDVEKNLAPKQETIIEVELTDVQKKYYRAILERNFSFLSLGANSNSN
VPNLLNTMMELRKCCNHPYLITGAEEKIVAELRQVYDPMASDFHLQALIRSAGKLVLLDK
LLPRLKAGGHKVLIFSQMVRCLDILEDYLINKRYLYERIDGRVRGNLRQAAIDRFSKPDS
DRFVFLLCTRAGGLGINLTAADTCVIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITR
NSYEREMLDKASLKLGLDRAVLQTMSGNKDSSVNGIQQFSKKEIEDLLRKGAYAAIMDEN
DEGSRFCEEDIDQILQRRATTITIESEGKGSTFSKASFVASENRNDIALDDPEFWQKWAK
KADIDMDSINRKNTLVIDTPRIRKQTRQFSSLRGEGGDLSDLDSDEEYPPANSRQSRASR
RAERHSGGGYGRTDCFRVEKHLLVYGWGRWRDILSHARCKRRLSERDVETICRVILVFCL
LHYRGDENIKSFIWELITPPENGCEPTTLLNHSGLSIPVPRGRKGKRVKAQSTFDVQKVE
WIRKYNPDTLLLDESYRKHLKHQCNKVLLRVRMLYYLKQEVIGEHADAVLKGADIRDVDI
WMPEMEQQEVPAGWWDTEADRSLLAGVFKHGYEMYTTMRADPCLCFVERVGRPDDKAIDA
EQHTGDTELGEDADYDKYSEDPEFKPASRHKDLFEEPDSMNMDEEVSVEDKAAPLVTESF
LSQSSAGSWPSSSSLTARLRRLITAYQRSYRQEQLKIEAEAKGDRRRRRCEQASKLKEIA
RQERQQRWTRREECDFYRVVSTFGVEKMKKEPSLPEVTDEYNWTRFRTFARLDKKTDESL
SRYFRAFVSMCRRVCHLPPGREDSLEPPQTVGPITEERASRTLYRISLLRRLRERVLPHP
ALEERLALAPPSSELPSWWILPDHDHQLMLAANLHGVSRTEQSIFADPQFTFNQAREEFI
QNQQAPPPPPPQPLPIIPLMQPKTEEEMCEVKEEGADDDAHLLSTELCADLQSTPLTHHD
GKIHGQAWSFKKSKGRGGRKGGEEGSDSDSDSDSGSSSSDQSGSSDDSGDSDEEGEKRKV
CDADEDNSLLSITPSQDGIPPPDPLRLEWPKDRVLINRLDNLCTLVLTGQWPSGRRYVSE
AQLNPSSELVGDDMSCTRLIRKPSSMTVGLGAEGEDGEFTVKLLKEEGLKLTFSKQSLMP
NGSAGESSIRKRRKDQELSDPEGLLDSLDGTPRRRDPPTWLKENPEYEVEGDMLELLVNR
SKRKRKRRPKALTGSEKVKLINMRTGKKVGTAFLPMLQDLREYLEENPDNAVAPEWSETV
RNSGFLPETYFHRLLTEHSQIPKKSKRRHHHHHHHHHHHHRHHHHLTPEPVHEEPSLDGV
EEETLVSDGAYMMDEEELEASHHFLTSADFDVKIMGGDGMSHADYDSSDQEALLDDVIMT
QKDSDSSSSSED
NT seq
7779 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccccatcatggacctctttgaggacacacctctgtttaacctggatgcccta
ccggacgactccttctcacagggctctacagaccccgtggaggaggctctgaagttggca
ttgggtcaggtggacccaccgaccgagccggaacccaccgttgaactcgcagataattct
gccctcagtgttcctgtagcagccccttctatccccgaccctgctcctgttcaagtccat
gtacaacagtcgatacccatggcaacggctcagactgtttccatggctgaagcttccact
gtggctccaactcttgcgccttctgatgctttacctcaaattcaggcccagaacaacatt
tctattgccagcaacaccagcggggtgtcctgtagcaccgtcctgttgagctcccctctg
gccgtttcctcctccccagctacaacaactgccacaacatcacagcttgcacagataacc
caccagctcactcctcagcagttagctgccattgcgcagcaggctggtggtaaaattgtt
attctcaagggaccgcagggtcaggcccaagttctccagactgtatctggggccacgagc
cagacaactggaaaggtgatccgtgtcttgtcaggcactcctctcaaacccggcatgtcc
atactgcagggtgggacagtattgagtcaggcaagtcctggacaagctcaagtcaaagtg
ggtacgggggtgcagaggttgctgcagtctccgaacggaccagtgaaacagttactgctc
acttccatgccgcagcagacacagggccagcaggttcaggtgcagatcccaactcaagcg
caggtggctcaaggccagactcaagtccaagttcagccacaggcccagatccaggtacag
ggccaagctgcacaaatccatgttcagcctcaaggccagacagctcagatccaggtccag
acccagagtcaggtgcagctacagccagccatgcaggcccacacacaaggtggtgaacca
aaacgaatcacgctggtgctccagcagccttctcagacaggttctgttgcaactgtgggt
cagaccatcacaacacagcaatcagtcacacaggtccaaacagcccaaggagggcagccg
cagacaccaaccagactggtgttgggtcaactccccggaggtaaactggtgttgcaggga
agccagattgctgccctggcccaggccagagccggtcaggctggagggcaacccaaagtt
ctcacaattcaactacaagtgcagcagcagccaaaccagcaaggaggggttaaataccag
ctggtttcaggagctggaaatgctggaagtccacaggtgctccagatctctcagggtcag
ccaggacaaagagttgcagtgcccctcaagatgctcctgcagccacagacaagttcagca
tcttcagctggtggcacagtctccgtggtgaaggtcatcaactcatcccccgcaggcccc
tctaccacaaccaccagcacctgcccaacacagaccatccgcattgccaaggcccctggt
gaaccggcctccgtaagacgagtggagatcctgtgtaaacaggagaaggccaaccggatt
gtggccgaggcgatagcccgggccaaggcgcgcggcgagaagaaccttccccgagtcctg
aaccaggacgagcttccatccagtcagacgtctcctgagatgggaggcaccataacgctg
gtgtctgcatccaagaaaaagagcagcggaggtggaagcaagaaaaaaactccagtgtcc
ggaggagccatggccaaagtagtgtgtggaggtgacaagaagggcaaagtgaagtcacca
ggaggaacacccggagtggccacaggcatcgtgacaccgggctgtgccagcaagagcaaa
agcaaaaccaagacaaacactatcactctggtgggtgcaaagaagaggaagagaaatggt
tcttctgaccattctgacggagagttgagtccagcctcacctactgcactggaagatgac
atgattatgaagcggcgctccaatcgtgtggtaaagaggaagaagtacacagaagacctg
gacatcaagatcacagatgacgaggacgagcaggaggacgtggacgtgaccacgacagcg
gcagccgtcgcctccattagttgtaacagcgccacacagctcaaacaggaaatggagctg
gatgccgatggactacccagcatgcagttctttgttgaaaatcctagtgaagaagatgca
gccattgtggacaaagttttgtccatgagattaaccaaaaaagaagtgtctcaaggccag
tacactaatgttgaagagttctttgtgaaatacaagaactattcctacttgcactgtgag
tgggccagtttggatcagctggagaaagacaagaggatccaccagaagattaaaaggttc
aagacgaagcatgcacagatgagacacattttccaggaggaggaggagcctttcaatcct
gactatgtggaagtggacaggatcttagacgagtcccatagtgtggacaaggacaacggc
gaacctgttatttactatttggtgaagtggtgctcactgccctatgaagatgccacatgg
gagctgaaggaggacgtggacgagggcaaagttgaagaattcagtaaaatccaaaaccga
caaccacgtgtgaagagagcgcctcggcctccagcagcttcatggaagaagctggaagaa
accagagaatacaaaaatgggaacatactgagagaatatcagctggaaggagtcaactgg
ctgctcttcaactggtacaacaggcagaactgcatcctggcagatgagatgggtctgggc
aagaccatccagtccatcgcactgctatcagagattcacggtgctggaatccaaggcccc
ttcctggttattgcccctctctccaccatcaccaactgggagagagagttctccacttgg
accaacatgaacgccatcgtctaccatggcagcctggccagccgacagatgatacagcag
tacgagatgtactgcaaggatgacaaggaccatttgatccccggtgcctacaagtttgac
gccctgatcacaacctttgagatggtgctgtccgactgccccgagctgagggaaatctcc
tggcgctgcgtcatcattgacgaggctcaccgccttaaaaatcgcaactgcaagttgttg
gacagcttgaagatgttggacctggagcacaaagtgttgttgaccggcactccactccag
aacaccgtggaggaacttttcagtctgcttcatttcctggagccagctcagttcccgtca
gagacggagttcctcagagactttggtgacctcaaaacagaggagcaggttcaaaaacta
caggccatcttgaaacctatgatgttgagaagactgaaggaggatgtggagaagaacttg
gctcctaaacaggaaaccatcattgaggttgagctgacggatgtccagaagaagtactac
agagctatcctggagcgtaacttcagtttcctcagtttgggagcaaacagtaacagcaac
gtccctaatcttctcaacactatgatggagctgcgaaagtgctgcaaccacccctacctc
atcacaggcgccgaggagaagatcgttgccgagctgcggcaggtctatgacccaatggcc
tccgacttccatttgcaggcactcattcgctcagctggcaagctagtgctactggacaag
ctgctgcctcgcctgaaggccggtggccacaaagtgctgatcttctcacagatggtgcgc
tgcttagacattctggaggactacctcatcaacaaaagatacctttatgagcgaatagat
ggcagagtgcgtggaaacttgcgtcaggctgccattgatcgcttcagcaaacctgactca
gaccgctttgtctttctgctgtgcacccgggccggtggcctgggtattaacctcactgct
gccgacacctgtgttatatttgactctgactggaacccccaaaatgacctgcaggctcaa
gccaggtgtcatcgtattggtcagtccaaggccgtgaaggtctaccgtctgataaccaga
aactcgtacgagagagagatgttggataaagcaagtctgaagcttggactggaccgtgcc
gtcctacagacgatgagtggcaacaaggacagcagtgtcaacgggatccagcagttctcc
aagaaggagattgaggacctcctgaggaaaggagcgtacgctgccattatggatgagaat
gatgaaggcagtcgcttctgcgaggaggacattgaccagatccttcagcggagagccacc
actatcaccattgagagcgaaggcaaaggctccaccttctccaaggctagctttgtagct
tcagagaaccgcaatgacatcgccctggacgaccccgagttctggcagaagtgggcgaag
aaggccgacatcgacatggactctatcaacagaaagaacaccctcgtgatcgacaccccc
agaatacgaaagcagactcgtcagttttccagtttacggggcgaaggtggagatctgtct
gatttggacagcgacgaggagtatccacctgcgaattccagacagtcccgtgcctccaga
cgagccgaacgccacagtggaggaggatatggacgcactgactgtttccgtgttgagaaa
cacctgctggtctacggctggggtcgctggagggacatcctttctcacgccaggtgcaaa
cggcgtctgagcgaacgtgacgtggagacgatctgtcgtgtaattctggtcttttgtctg
cttcactaccgtggcgacgaaaacatcaagagcttcatctgggagctcatcactcctcca
gagaacgggtgtgagcccaccacactgctcaaccactctggtctgtctattcctgtcccg
agaggcaggaagggcaaacgggtaaaagctcagagcacctttgacgttcagaaagtggag
tggatcaggaagtataaccctgacaccctactgctggacgagagctaccgcaaacacctc
aaacaccagtgcaacaaggtgttgctcagagtgcgtatgctgtactacctgaagcaggaa
gttattggagaacacgccgacgccgtcctgaagggagccgacatcagggacgttgacatc
tggatgcccgagatggagcagcaggaggttccagcaggatggtgggatactgaggccgac
cgctcgctgctcgccggtgttttcaaacacggttatgaaatgtacaccaccatgcgtgcc
gatccctgcctttgctttgtggagagagttggtcgccctgacgacaaggccattgatgct
gagcagcacactggtgacacagagctgggagaggatgccgactacgataaatactcagag
gatccagagttcaaaccggcctcgaggcacaaagatctttttgaggagcctgactccatg
aacatggacgaggaggtttctgtggaggacaaggccgctccactggtcacagagagcttt
ttgagtcagagcagtgcaggcagctggccctccagctcgtccctcacagcacggctacgt
cgtctgatcacggcttaccaacgcagctacagacaggagcagctgaaaattgaggctgag
gccaagggtgaccgccgacggaggaggtgtgaacaggccagtaaactgaaggagatcgca
cggcaggagcgtcagcagagatggacacgaagggaagagtgcgacttctatcgcgtggtg
tcaaccttcggcgtggagaagatgaaaaaggaaccaagtcttcctgaagtcacagatgag
tacaactggacacggttccgcacctttgctcgtctggataaaaaaactgacgagagcctc
agtcgatacttccgtgcttttgtctcgatgtgccggagggtgtgtcacctccccccaggc
cgagaagattccttggagcccccacagacagtgggccccatcactgaggagcgcgcctcc
cgtacactctaccgtatcagcctcctgcgtcgcctccgtgagcgggtcctgcctcaccct
gccctggaggagcgcctggccctggccccgcccagctcggagttgcccagctggtggatt
ttgccagaccacgatcatcagctgatgttggcggcaaacctgcacggcgtcagccgcacc
gagcagtccatcttcgcagacccgcagttcaccttcaaccaagctcgggaagagtttatc
cagaaccagcaggccccgccgccgcctccaccccagccgctgcccatcatacccctcatg
cagcccaagacggaggaagaaatgtgcgaggtgaaggaggaaggagccgacgatgacgct
catttgctcagcactgaactctgtgccgaccttcagagcacgcctttaacccatcacgat
gggaaaatacacggacaggcatggagctttaaaaagagcaaaggaagaggggggaggaaa
ggtggagaggaaggatccgattcagattctgactctgactcgggctcgtcatcgtcggac
cagtcggggagcagcgacgacagtggggacagtgacgaggagggtgaaaagagaaaggtg
tgtgacgcagatgaagacaacagtttactatccatcactccgtctcaggacggtattcca
cctcctgatcctctcagacttgaatggccaaaggaccgtgtgttgatcaacagactggac
aacctgtgtacgttggtgctgacgggtcagtggccctcaggacggcggtacgtgtccgag
gctcagctcaaccccagctctgagctggtgggagacgatatgtcctgcacgaggctgatc
cgtaaacccagcagcatgaccgtaggtctgggggctgaaggagaagacggagagttcact
gtcaaactgctgaaggaggaggggctaaagctgaccttctccaaacagtcactgatgcct
aatggatcagcaggagagagcagcatacgcaagagacgcaaagatcaagagttatcagat
ccagagggtctcctggattctctggatggcacgcctcgacggagagaccctcccacatgg
ctgaaggagaacccagaatatgaggtggagggagacatgctagagcttcttgtgaacaga
agcaaaaggaagaggaagaggaggccaaaagccctaaccggcagtgagaaggtcaagctc
ataaatatgaggacaggaaagaaggttggaacagcgttccttcctatgctgcaagacctg
agagaatatctggaggagaaccctgacaacgctgtagcaccagagtggtccgagacagtt
cggaactcgggtttcctgcctgagacctacttccaccgactgctgactgaacactcacag
atccctaagaaaagcaagaggcgtcatcaccatcatcaccatcaccaccaccaccaccac
cgtcaccaccatcacctcactccagagcctgttcatgaagagcccagcctggacggtgtt
gaggaggagacactggtatcggacggagcctacatgatggacgaggaggagctggaggcc
tcccatcactttctcaccagtgcagactttgatgtgaaaattatgggcggtgacggcatg
tcccatgccgactatgacagttcggatcaggaggcgttactagatgatgtcatcatgaca
cagaaggactctgactcttcgtcgagctcagaggattga
DBGET
integrated database retrieval system
