Cynoglossus semilaevis (tongue sole): 103396595
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Entry
103396595 CDS
T04866
Symbol
acin1
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus isoform X1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem03013
Nucleocytoplasmic transport
csem03015
mRNA surveillance pathway
csem03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103396595 (acin1)
09122 Translation
03013 Nucleocytoplasmic transport
103396595 (acin1)
03015 mRNA surveillance pathway
103396595 (acin1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csem03019
]
103396595 (acin1)
03041 Spliceosome [BR:
csem03041
]
103396595 (acin1)
Messenger RNA biogenesis [BR:
csem03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
103396595 (acin1)
Spliceosome [BR:
csem03041
]
Complex C
Other components
EJC/TREX
103396595 (acin1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
Motif
Other DBs
NCBI-GeneID:
103396595
NCBI-ProteinID:
XP_016897742
LinkDB
All DBs
Position
20:11853964..11865528
Genome browser
AA seq
1170 aa
AA seq
DB search
MQKALELERQARERALEQERLERERALEAERRERERIAREMALEQERLEKVRLEQERVER
EKALEKERLEMERALERERIEKEMALERERIEREKALEQERLEKERLEKERALEQERLEK
EKLEKEKALEQERLEKERALEQERLEKERLEKERALEQERLEKERAIEQKRLEKERALEQ
ERLEKELALEQEWKEKERIERERLEQERIDKEKALEREREEKARAAALEEKRKEKEKAEK
EERARLEREMALEQERIEMERTLEKERVERERALEDERGKAIEQERLEREEAVRNEKKER
ERELSSLAEKGRQSDSVSSKSGQEVGLTTLSTPTTPTSEPDRKPLSEDVQEVVPAPLFHG
APPSQTLLSPQSPFKKSRFFRDSPIQPPPSSTSVVIMRPTPRPESSSVLSPTSVGEQQHE
AQHRSAKHEDPQMQTKMDAAGSIGIQSQQTGLGKTEHHAVATTEKVQEVDERQNQSAQRR
EGRSVEKEEKPTRQRSSSNESSSSESESGSSSSGSSRSSDSSSEEKPFISRSRREANSRT
DSSPEPMVTDEVSNDIPKASPRKRDRSRDDDNTTVDGERPTKKPFTEAPSQDEKQRQRTY
SGQEEETDKPRPVKETAMAEPEKTPENNEETPKTFSARKISLSNNKLSPGGSGVEGEQES
GAAAGRKRRWGSSTAVTAKKPSISITTDSLKSLIPDIRPCLGQEAVVDLHPEEAVLSGIE
DEERERSDQDLQIRRTVTQVVHPESQENGQKETKRSRLEELEEEDQAAEVEITRAHEEKM
ETSFTEAGETQSPSRTSHDAGNSTVTPSDTLIRRSISQQKTGVSITIDDPVRTTRQPSPP
RGKVSNIVHVCNLVRPFTLGQLKELLSRTGTLVDDGFWIDKIKSHCYVTYSSSEEAVATR
AALHGVKWPQSNPKLLSVDFCLQEELDFHKTMGERPDKPGAEEQGPGRGRTAALPPLLPE
RDQWAEREREMERREKGRAEREWDRDKVREFEKLGAEKEGASRRSRSRERRRKERGKSKE
KKSEKKEKPEDPPAKLLDDLFRKTKAAPCIYWLPLTDEQYVQRQADRVERQKEREKRRKE
LEEEEEKKREEERKERMKTAGGAAGDRSEGEKDKDRERERDKDRGRDRERERERENDKRR
DGYRRPGGSTTGGSRRSRSRSRSDPRDRRR
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaagcattagagttggaaagacaagcgagagaaagagctctggagcaggagagg
ttggaaagggagagagctttggaagctgagagaagggagagggaaaggattgcacgggag
atggcgttggagcaggaaaggcttgaaaaagtgaggttggagcaagagcgagtagaaaga
gaaaaggccctggagaaagagaggctagagatggagagagccttggagcgggaaagaata
gagaaggagatggctttagaacgtgagaggattgagagagagaaagctttggagcaggag
aggttggagaaggagaggctggagaaagagagggctctcgagcaagagaggttggagaag
gagaagctggagaaggagaaggctctcgagcaagagaggttagagaaggagagggctctc
gagcaagagaggttggagaaggagaggctggagaaggagagggctcttgagcaagagagg
ttggagaaggagcgagctattgagcaaaagaggctggagaaggagcgagctcttgagcaa
gagaggctggagaaagagttagctctcgagcaggagtggaaagaaaaagaaagaattgaa
agagagaggttggaacaagagaggatagacaaggaaaaggccctggaacgtgaaagagag
gaaaaggcgagagcagcagctctagaagagaaaaggaaagagaaggaaaaggcagaaaaa
gaagaaagggcaagactagagagggagatggctctagaacaagagcgaattgaaatggag
agaacattggagaaggaaagggtggagagagagagagctctggaggacgagagaggtaaa
gccattgaacaggaaagattagaacgagaagaagctgtgaggaatgaaaaaaaggagcgg
gagagagagctctctagcctggctgaaaaaggaaggcagagtgattcagtttcatccaaa
tctgggcaagaggttggtctcacaaccctttccactcccacaacccccacctcagaacca
gatagaaagccattgtctgaagatgtgcaggaagttgtacctgctccactgtttcacggt
gcacccccttcacaaacacttctgtcaccacagtctccttttaagaagtcccgcttcttt
agagactctcctatccagcccccaccttcctccacgtcagtagtcatcatgcgacccacc
cctcggcctgagtcttcatctgtactctcccccaccagtgttggagaacagcagcatgaa
gcacagcatcgctctgctaaacatgaagatccccaaatgcagacaaaaatggatgctgct
ggttccattgggatccagtcacagcagacaggtttggggaagactgaacatcatgcagtt
gcaaccactgaaaaagtgcaggaggtggacgaaagacaaaatcaatctgcccagcggcga
gagggaaggagcgtggaaaaggaagagaaaccaacaagacaaagatcttcatccaatgaa
tcgtcttcctccgaatcagagtccgggtcctcatcatctgggtcctcaaggtcatctgac
tcttcttcagaggagaagccgttcatctcccgcagcagacgggaggctaattcaaggaca
gactcttcaccggagccaatggtgacagacgaggtttcaaatgatatcccaaaagcgtcc
cctcgcaaaagagaccggtctagagatgacgacaacacaactgtagatggagaaagaccc
accaagaaacccttcacagaagctccatctcaagatgagaaacaaagacaaaggacgtac
agtggacaagaggaggaaactgacaaaccaagaccggtaaaggagactgccatggcagag
ccagagaagactccagagaacaacgaggagacaccaaagaccttctcagctcgtaaaatc
tccctcagcaacaacaagttgtctccaggcggcagcggtgtagagggggagcaggagtct
ggggctgcagctggtcgtaagagacggtggggctccagcacagcagtgactgccaagaaa
ccttccatcagcatcaccacagactcactcaagtctctaatcccagacatccgtccctgt
ctcggccaagaggcagtagtggatctgcacccagaagaagctgtgctctctgggattgaa
gacgaggagcgcgagcgttcagaccaggacctccagatccgtcgcactgtcacacaggtt
gtgcacccagagagccaggaaaatggacaaaaagagaccaagaggagcagactggaggag
ctggaggaggaagaccaagcagcagaagtagaaataacaagagcgcatgaggaaaaaatg
gaaacttcatttacagaagcaggggaaacacaatccccgtcacgtaccagccacgatgca
ggaaatagcactgtgacccccagcgacacgctcattcgtcgctcaatcagccagcagaaa
acgggcgtttctatcacaatcgacgaccctgttcgtacgactcggcagccgtcacctcca
cgaggaaaagtctccaacatcgtccatgtctgcaatctggtgaggccattcactctgggt
cagctgaaggagctgctcagcagaactggcaccctggtggacgatggcttctggatcgac
aaaatcaagtctcactgctacgtcacttactccagctcagaagaggcggtcgctacacga
gcggctctccatggagtaaaatggcctcagagcaaccccaaactcctcagtgtggacttc
tgtcttcaagaggagctggactttcacaaaaccatgggtgaaagacctgacaaaccagga
gctgaggaacagggtcctggtcgtggtcgcacagcagccctcccccctctcctccctgag
agggaccaatgggccgagcgcgagcgtgagatggagcgacgggaaaagggccgagcagag
cgagagtgggaccgtgacaaggtcagagagtttgagaaacttggggctgaaaaggaggga
gcttctaggaggtcacgctccagggagagacggcgtaaggagagaggaaagagcaaagag
aagaagagtgaaaagaaagaaaaaccggaggatcctcctgcaaagctgctggatgacctg
ttccgcaaaaccaaagctgctccttgcatttattggcttccactaacagacgaacagtat
gttcagcggcaggctgacagagtggagcggcagaaggagcgtgaaaaacggaggaaagag
ctggaagaggaggaggagaaaaaaagggaagaggagcgtaaggaacggatgaaaactgct
ggtggtgccgcaggagaccggagtgagggtgagaaagacaaggacagagagagggagaga
gacaaagaccggggcagagacagggagagggagagggaaagggagaacgacaaacgcagg
gatggctaccgcaggccagggggtagcaccacaggcgggagccgccgtagccgtagccgt
agccgcagtgacccgcgagataggcggcgctaa
DBGET
integrated database retrieval system
