Cynoglossus semilaevis (tongue sole): 103396620
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Entry
103396620 CDS
T04866
Symbol
depdc5
Name
(RefSeq) DEP domain-containing protein 5 isoform X1
KO
K20404
SEA/GATOR complex protein SEA1/DEPDC5
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
103396620 (depdc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csem04131
]
103396620 (depdc5)
Membrane trafficking [BR:
csem04131
]
Autophagy
Other autophagy associated proteins
SEACIT/GATOR1 complex
103396620 (depdc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEPDC5_CTD
IML1
IML1_N
DEP
IML1_N_fung
Motif
Other DBs
NCBI-GeneID:
103396620
NCBI-ProteinID:
XP_016897702
LinkDB
All DBs
Position
20:complement(12017890..12031605)
Genome browser
AA seq
1573 aa
AA seq
DB search
MKINKSYKLVLHKKGFGGSDDELVVNPKLFPQVSLGDIIEIAHPTDEYSPLLLQVKSLKD
DLQKETISVDQTVAQAFKFRAYQDVIVNIVDPKDVSLDLVELTFKDQYIGRGDMWRLKKT
LVTTCVYVTQKVEFAGIRAQAGELWVKGEKVTCGYISEDTRVVFRSTSAMVYIFIQMSCE
MWDFDVYGDLYFEKAVNGFLSDLFAKWKEKNCSHEVTVVLFSRTFYSAKSIDEFPEILRG
SIRQDHDGCFYEDFYRVVAQNERRDEWTTLQVTIKELFIQYPVLVRLKEADGFPVGYNST
AAQGNYLEAINLSFNVFDKHYINRNFDRTGQMTVVITPGVGVFEVDRLLMILTKQRMIDN
GIGVDLVCMGEQPLHAVPLFKLHNRTTSGDSLVGDDYNLPHWINHSFYTTRGLNPCCFFT
PRIKLASRKINTEKTKSNKKHTLCPSRDSDNSLPIQVDYNAYDAQVFKIPGPLRVQRAAT
LRMGKERRDSKEPSGRKSCVDVGGGAGAGMSSPAYSTGPEEHHSLASDDSVGPVSNVVLI
PRLPAVQYEISSSLGYSSTRELLENKKDPQRDSSAPGRFTVGSAESTLHIRPGSFTSQRA
LINPFTPSRMPTKLTSNRRRWMHTFPVGPSGEAIQIHHQIKNQSIAEVQGQKQRDPAHTS
AELLELAYQEATGRQNSSRAGEIHPCMGGWTEEYAGSPGSNSNVTQTHHGSSCEDFVSAG
GGDPILLLSAPPTVPSFCCTVGVDWKSLTMPACLPLTTDYFPEHQTLQNDYTEGCYDLLP
HSDLDRREDEAPLMTATQVFEEFICQRLMQGYQIIVQSNHRKPKVAVATPLGSSPLYTRG
VVSMRRAEEEEMVYWLSMGRTFHKVCLKDKIITVTRYLPKHPYETTQIQYSYSLCPPHCD
AQFVSSWVEFGHERLEEYKWNYLDQYICSGGSEDFSLIESLKFWRTRFLLLPAGGARRVA
DGQGHWDVYSDGTGTGLGGSGEWLLLDGFIRFLEGLNRIRRRHRSDRIIRPKGTPIKGLH
VTSPLPSYTPEPLQPPQVKKGTSVLSALLEMEQSQKTLEDQQQQQQMKPSAIICEPATVA
TAVTFADSPRKLPIEASEIADKVVPPGVTSGAAAAQPGETAASSSSTDTSGQAAIGALSL
SSSTPWEILEAIKHPTTGVQLLPEQKGLPLNCFISAEAVHWLVSNMEGVATQGMAIDVMQ
KLLDEGLVAHASGDAMRTFVYGFYFYRIVGEKDGLSSQPPLTAGLSASALEDLAIFQRKW
FEVAFVLDEPQPCNLPAFLLPRLPSRPASYASRHSSFSRSFGGRSQTAAMLGTAATVPEQ
KTVTLDLGTTSRNDRTEWCSSYYHGSFSLKNAFEIKLHWMAVTAAVLFEMVQGWHRKAAS
CGFLMVPVLEVPFALTTYLFGDPLRAQLFIPLNIQCLLSNGSDNLFEGFEPETYWDRMQL
FQEAILYRFGFVHDKFSASTFNFSSENKPQYIHVTGTVFLQLPYSKRRYSSGQQRRRRNS
TNSNSHGPFGHEDRVGYCWSYNTMLTKAWRTGVLGDERLADRLFRDFRDFCSNKDNRLLN
FWNSCQEKMTRAP
NT seq
4722 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcaataagtcatataaattagttctgcacaagaaaggatttggaggaagtgat
gatgagctggtagtaaatcctaaactcttcccacaagtcagtttgggagatatcattgag
attgcacatccgacagatgaatacagtcctctgctgctgcaagtcaaaagcctaaaagat
gatctgcagaaagaaacaatcagtgtggaccagacagtagctcaggccttcaaattccgt
gcctatcaggatgtcattgtgaacatcgttgaccctaaggatgtaagtctggacctggtg
gagctgacattcaaggatcagtacattggcagaggagacatgtggaggctgaagaagact
ctggtgaccacatgtgtgtatgtcacacagaaagtggagtttgctggaataagagcccag
gccggtgaactttgggtgaaaggggagaaagtgacctgtggttacattagtgaagacacc
agggtggtgttcaggtccacatctgccatggtgtacatcttcatccagatgagctgtgag
atgtgggactttgacgtctatggtgacctgtactttgaaaaagccgtcaatggttttctg
tctgacctctttgccaagtggaaggagaagaactgcagccatgaggtgactgttgtcctc
ttctcacgaacattctacagtgccaaaagtattgatgaatttcctgagattctgcgaggt
tcgatcagacaggatcacgacgggtgtttttatgaagacttctacagggtcgtggcacag
aatgagcgacgagacgagtggacgacactgcaggtcaccataaaggagctcttcattcag
tatccagttctagttcgactgaaagaagcagatggatttcctgtgggctacaactccact
gctgctcagggaaactacctggaagcgattaacctttcctttaatgtatttgacaagcac
tacatcaaccgtaactttgacaggactggacagatgacggtggttattacacctggtgtg
ggggtctttgaagtggaccgtcttcttatgattctgaccaaacagagaatgattgacaac
ggtatcggtgtggacttggtgtgtatgggggagcagccgctgcatgcagtaccactattc
aagctgcacaacaggacaacatctggagactccctcgttggcgatgactataaccttcct
cactggatcaaccacagcttctacaccaccagaggcctcaacccctgctgcttcttcacc
cctcgaatcaaactagccagtcgtaagattaacacagaaaaaacgaagagcaacaaaaaa
cacactctttgcccttcgagggattcggacaacagtttgcccatacaagtcgactacaac
gcctacgacgctcaggtgttcaagattcccggtcctttacgagttcagagggccgcgacc
cttaggatgggtaaagaaagaagagattctaaagagcccagtggcaggaagagctgcgtg
gatgtcggtgggggtgcgggtgcaggaatgtcgtctcctgcgtactccacaggtccagag
gagcaccacagcctggcatctgatgacagcgtgggtccagtttccaatgtggtccttata
ccacgtctgcccgccgtccagtatgaaatcagcagttctctgggatactcaagcactagg
gagttactggagaacaaaaaggaccctcagcgggactcgagtgcaccgggtcgtttcact
gtagggagcgccgagtccacgttgcacatccgacctggaagtttcacctcacagagagct
ctgatcaacccgttcacgccctccaggatgccaacaaaactcacatcaaaccgcaggcgc
tggatgcacacttttcccgttggtccatctggagaagccatccagatccatcatcaaatc
aaaaaccagagtattgctgaggtgcagggccaaaagcagagagatcctgcccacacctct
gccgagctgctggagctggcgtatcaagaagctaccggaaggcaaaacagctctagagct
ggagagatccacccctgcatgggtggatggacggaggagtacgctggaagtccaggaagc
aacagcaatgtgactcagactcaccacggctcctcgtgtgaagactttgtttccgctggt
ggtggtgatccaatcctcctcctatctgcacccccgacagtgcccagtttctgctgtaca
gttggagtggactggaagtctctgaccatgccggcctgtctgcctctcaccaccgactac
ttcccggaacaccagaccctgcagaacgactacactgaaggctgctacgacctgctgcca
cacagtgacctggacaggcgagaagatgaggctccgctgatgaccgccactcaggtgttt
gaagagttcatctgtcagaggttgatgcagggctaccagatcatagtccagtccaaccac
agaaaaccaaaggttgccgtggccacacctcttggcagcagccctctctacaccagaggc
gtcgtctccatgcgtcgggcggaggaggaggagatggtttactggctcagtatgggacgc
acctttcacaaagtttgtcttaaagacaaaatcatcactgtgactcgctacctacccaag
cacccgtatgagacaactcagatccagtacagctacagcctgtgtcctccccactgtgac
gcccagtttgtttcctcctgggtggagttcggccacgagagactggaggaatacaagtgg
aattacctggaccagtacatctgctccggcggttctgaggacttcagtttgattgaatct
ctgaagttctggaggactcgctttctgcttctgccagctggaggcgctaggagggtggca
gatgggcagggccactgggatgtttacagtgatggaacaggtactggcctggggggcagt
ggggagtggctgctgctggatggcttcatcaggttcctggagggtctcaaccgcatccgt
cgacgccatcgctctgacaggataatcaggcccaaaggcacaccaataaaaggactgcac
gttaccagtcccctgccttcatataccccagagcctctgcagcccccgcaggtcaagaaa
ggaacttcagttctctctgcgctgctagaaatggaacaaagtcagaagaccctggaggat
cagcagcagcagcagcagatgaaaccctctgctatcatctgtgaacctgctacggttgct
acagcggtcacatttgcagacagtcctcgcaaattgccaattgaagccagtgagattgct
gataaggttgtccctcctggagtgacaagtggagcagcagcagcacagcctggagagacg
gcagccagcagcagcagcacagacaccagtggccaggctgcaataggagctctttctctg
tcttcgtcaactccctgggaaatcctggaggccatcaaacaccccacgacaggtgtgcag
ctcctgccagagcagaaaggtctgccactcaactgctttatcagtgctgaggccgttcat
tggctggtcagcaacatggagggcgtggctacacaggggatggctatagatgtgatgcag
aaactgctggatgaaggtctggtggcccacgcttctggagacgcaatgcgcacatttgtc
tatgggttctacttctacaggattgtaggagagaaggatggtctcagctcccagcccccc
ctcacagcaggactgtctgcttcagccctggaggaccttgccattttccagaggaagtgg
tttgaagtagcttttgttttggacgagccgcaaccctgcaacctcccagcattcctcctt
cctcgactgccaagccgccctgcgtcgtatgcgagcagacacagctccttcagtcgcagc
tttggagggcgtagccagactgctgcaatgctaggtacagctgctacagtcccagagcag
aagacggtcactctggacttgggcactaccagtcgcaatgaccgcacggagtggtgcagc
agttattaccacgggagtttctcgctgaaaaatgcctttgagatcaagctccactggatg
gctgtcaccgccgcggttctttttgaaatggttcaggggtggcacaggaaggcagcgtcc
tgtggtttcctcatggtgcctgtgctggaggttcccttcgctctgaccacgtacctgttt
ggagacccactgagggctcagctcttcatccctctcaacatccagtgtctgcttagcaat
ggcagcgacaacctgttcgaaggctttgaaccagagacctactgggacaggatgcagctc
tttcaggaagccatactgtacagatttggttttgtacatgacaagttctccgcctcaact
tttaacttctcctctgagaataagccgcagtacattcacgtcacaggcaccgtcttcctg
cagctgccttattccaaacgcaggtactccagcgggcagcagcggcggcgccggaactcc
accaactccaacagccatgggccatttggccacgaggaccgggtgggctactgctggtcc
tacaacaccatgctgaccaaggcatggaggacgggcgtgctgggcgacgagaggttggct
gaccgactgtttagagacttcagggatttctgctccaacaaggacaacagactgctcaac
ttctggaacagctgtcaggagaaaatgaccagagctccctga
DBGET
integrated database retrieval system
