Cynoglossus semilaevis (tongue sole): 103396658
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Entry
103396658 CDS
T04866
Symbol
rfwd2
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD2
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem04115
p53 signaling pathway
csem04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
103396658 (rfwd2)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
103396658 (rfwd2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csem04121
]
103396658 (rfwd2)
Enzymes [BR:
csem01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103396658 (rfwd2)
Ubiquitin system [BR:
csem04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103396658 (rfwd2)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
103396658 (rfwd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_EIPR1
zf-C3HC4_2
Beta-prop_RIG_2nd
EIF3I
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
zf-C3HC4
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
zf-RING_2
Beta-prop_DCAF4
Beta-prop_EML
zf-RING_UBOX
Beta-prop_WDR90_POC16_2nd
zf-C3HC4_3
zf-C3HC4_4
zf-RING_5
RING_XB3-XBAT31
WD40_RFWD3
WD40_like
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_1st
Beta-prop_DCAF12
Beta-prop_NUP159_NUP214
Beta-prop_IFT122_1st
zf-rbx1
zf-RING_10
Sina_RING
Beta-prop_SPT8
UvrD-helicase
zf_C2H2_10
zf-Nse
Motif
Other DBs
NCBI-GeneID:
103396658
NCBI-ProteinID:
XP_008333059
UniProt:
A0A3P8X0G9
LinkDB
All DBs
Position
20:12675896..12684514
Genome browser
AA seq
715 aa
AA seq
DB search
MASNRPQQSASGASSMPSTSSSSSSGGAGNTSSGVGGGSNNVTSNGSSSGNVVPSRTLAA
AGEGGLSSVPTMAAVSSSRGGFPSLSRPASSSSSRKKSLHQAPLHNGLLNSYEDKSNDFV
CPICFEMIEEAYMTKCGHSFCFKCIRRSLEDSNRCPKCNYIVDNVDQLYPNFLVNELILK
QKQRSEEKRLKLDHPNGSRWQVFQDVLSPDQENLDLANVNLMLELLVQKKKQLEVESQAA
QRQILMEFLKEARRNKREQLDQLQKELNFLEEDIKRVEEMSGLYCPMMEAECTVPNVEAP
SPAPSCSSIIEPTDYSQPPGFGGTSQGKRQTWYNSTLASRRKRLTAHFEDLEQCYFSSKM
SHITDEGRNLNLLDDFMECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYF
AIAGVTKKIKVFEYSTVIQDAVDIHYPVNEMTCNSKISCISWSSYHKNLLASSDYEGTVI
LWDGFTGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKVKLWSTNLDNSVASIEAKA
NVCCVKFSPTSRYHLAFGCADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFVNGEEIVSA
STDSQLKLWNVNKTHCLRSFKGHINEKNFVGLASNGDYVACGSENNSLYLYYKGLSKTLL
TFKFDTVKSVLDKDKKEDDTNEFVSAVCWRALPDGESNVLIAANSQGTIKVLELV
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atggcaagcaaccggccacagcagagtgccagcggggctagttcaatgcccagcacaagc
agcagcagcagctcagggggtgctggaaatacaagtagtggcgttggcggaggtagcaac
aacgtcactagtaatgggagcagttctggaaatgttgtgcccagtcggacccttgcagcg
gccggcgaagggggtttgtcgtcagtgccaactatggctgccgtatcgtcgtcccgggga
gggttcccttctctaagcagacctgcatcttcctccagtagcagaaagaagtctctccac
caagcacctttacacaatggcctcttgaattcctacgaagataaaagcaacgatttcgtc
tgtccaatttgcttcgaaatgatagaagaggcttacatgacaaagtgtgggcacagtttc
tgtttcaagtgcatccgccggagtcttgaggatagcaacaggtgtcccaagtgtaattat
attgtggataatgtcgatcagctttacccaaatttccttgtcaatgaactgatcttaaag
cagaaacaaaggtcagaagagaaaagacttaaattagatcatccaaacggttctaggtgg
caggtttttcaggatgtgttgagtcctgaccaggagaacttggacctggccaatgtcaac
cttatgcttgaactcctggttcaaaagaagaagcaattggaggtggaatctcaagcagct
caaagacagatcctcatggagttcctgaaagaagccaggagaaacaagagagagcaactg
gatcagttacagaaagaactcaactttcttgaagaagacataaagcgtgttgaggaaatg
agtgggctctactgccccatgatggaggcagagtgtactgttcctaatgtggaggctccc
tcaccagcacccagctgtagcagtattattgagccaacagattatagccagcctccagga
tttggtggaacgtcacagggtaaacgtcagacttggtacaacagcactcttgcttcaagg
agaaagagactgaccgctcattttgaagatctagaacagtgctacttctccagcaaaatg
tcccacatcactgatgagggcaggaacctgaacctgttggatgatttcatggagtgtttg
tccaagttcactcgctacaattccgtgcgaccgttggccaccctatcatatgcaagtgac
ctgtataacggctccagtattgtctccagtattgaatttgaccgtgactgtgactacttt
gccattgctggtgtgaccaagaagatcaaagtgtttgagtacagcacagtgatccaagat
gcagtggatatacactaccccgtcaacgagatgacctgcaactccaaaatcagctgtatc
agctggagcagttatcacaagaaccttttagccagcagtgactatgaagggaccgtcatc
ctgtgggatggattcactggacaaaggtctaaagtctatcaggagcacgaaaaaagatgt
tggagcgttgacttcaacctaatggaccccaagctcttagcctctggttccgatgatgct
aaagtgaagctgtggtcaaccaatcttgataactcagtggctagcatagaggcaaaggca
aatgtctgctgtgttaaattcagtccaacatcgagatatcatctggcctttggctgtgca
gaccactgtgtccactactacgatttacgcaacactaagcagccgatcatggtgtttaaa
ggccataggaaggcagtgtcctacgccaagtttgtcaacggagaggaaattgtttctgct
tcaacagacagtcagctgaagctgtggaacgtcaacaaaacccactgtttgcgctccttc
aagggtcacatcaatgagaaaaactttgtcggccttgcttccaacggcgactacgttgct
tgtggaagtgaaaacaactccttgtatctctactacaagggactttccaaaacgctgtta
acctttaagtttgatactgtgaagagtgtcctggacaaagacaagaaggaagacgacacc
aacgagtttgtcagtgccgtgtgctggagggcactgcctgacggagagtcaaatgtgctg
attgctgcaaacagtcaaggaacaatcaaggtccttgagctcgtctga
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