Cynoglossus semilaevis (tongue sole): 103396733
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Entry
103396733 CDS
T04866
Symbol
ncstn
Name
(RefSeq) nicastrin isoform X1
KO
K06171
nicastrin
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
103396733 (ncstn)
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Gene cluster
GFIT
Motif
Pfam:
Nicastrin
Ncstrn_small
Peptidase_M28
Motif
Other DBs
NCBI-GeneID:
103396733
NCBI-ProteinID:
XP_008333164
UniProt:
A0A3P8X5C9
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Position
20:complement(12906936..12916023)
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AA seq
700 aa
AA seq
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MDFTSHKWISNLLFCWFFIGVSCNSVEKKIYVKLNYTIPCVRLLNATHQIGCQSSNAGNV
GVLHVLQTEENLDWVLRSGPNPPYMVIIDTPLFTRSVMMQLKNGSSRVAGVAVVAPNTNP
EKSFSPHTTCPNQNTGLYTETYDPSLANCNTTVWNPLGNGLSYEEFGFPIFSLKDDNDTR
VMKQCYFDHNQAVNGSTQYPLCAMELFSHMYAVTDTATCMRRNALNFEAEPDKVCDPLGD
LNIWSSTRPINNTEKGHKKWESVVIAAARLDSRSFFYDIAPGGQSAASGFVALLAAAHAL
RNITQETPPNRTILYTFFQGETFDYIGSSRMVYDMEQNQFPLDLDNVHSVVEVGQVGLRA
DSDLWLHTDPVSRKNDSINTEVQALIEKLRLAATNLSVTPVSPSFSQPLPPSSFQRFLRA
RPFPGVVLEDHQSQFSNRFYQSMYDNNEYLNVSYPTDLTPDQQLEFVTDTAKALTDVATL
VARALYMQAGGAEDQLVDIKADPQIVTRMLYSFLVRSNNSWFQQFVPAEHASHLKDRPMN
MYIGPIQQFSEPTLPVKYLLAYLTGSVVNVTQENCQNQRQDEDDKRNKHFYNYFWVQGTA
PPNSTERVGFCVRSTVRHSKAVSPAFELEQYTTADYSTWTESRWKPITGRIFLVASHELE
MLTLAVGIGVLLTSLFLTYAISAKADILFNSVREPTNATY
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atggattttacatcgcacaagtggatcagtaatttgctgttttgttggtttttcattggt
gtcagctgtaactcagtggaaaagaagatttatgtcaagctcaattacaccattccatgt
gtgcgactgcttaatgcaacacatcaaataggctgccagtcctcaaatgcaggtaacgtt
ggtgtgctccatgtactacagacagaggaaaacctggactgggtcttgcgttctggtccc
aatccgccttacatggtcatcatagacaccccgctttttaccagatccgtcatgatgcag
ttgaagaatggctccagcagagtggcgggcgtcgctgttgtggcgccaaacacaaaccca
gaaaagagcttctctccacacaccacctgtcccaaccagaacacaggtctgtacacggag
acgtacgaccccagcttggccaactgtaacacgacggtgtggaaccctcttggaaacggc
ctctcgtacgaagagtttggttttcccatattctctctcaaagacgacaacgacacccgg
gtcatgaagcagtgttactttgaccataaccaggctgtaaacggcagcactcagtaccca
ctctgtgccatggagctcttctcccacatgtatgctgtcacggacacggccacctgcatg
agaaggaacgccttaaacttcgaagcagagccagataaggtttgtgacccactgggcgac
ttgaacatttggagctccaccaggcccatcaacaacacagaaaagggtcacaagaagtgg
gagagtgtggtcatcgctgcagccaggttggacagccggtcgtttttctatgacattgct
cctggaggacagagtgcagcttcggggtttgtcgctctgctggcggccgctcacgccctg
cgtaacatcacccaggagactccgcccaaccgcacaatcctctacacctttttccagggg
gaaaccttcgactacatcggcagttccaggatggtgtatgacatggagcaaaaccagttc
ccactggacctggacaatgtccactcagtggtggaggttggacaggttggacttcgtgct
gattccgacctatggcttcacactgatcctgtgtccaggaagaacgacagcatcaacaca
gaggttcaggcactgattgaaaagctgcgattggctgctacaaatctgagcgtcacaccg
gtgtcgccgtctttttcccagccgctgccgccatcatccttccagcgtttcctccgagct
cggccctttcccggggtggtcctggaggaccatcagtcccagtttagcaacaggttctat
cagagcatgtatgacaacaacgaatacctgaacgtgtcgtatccaacagatctgactcca
gatcagcagctggagtttgtcactgacacggcaaaggctctgaccgacgtggccaccttg
gtcgctcgggctctctacatgcaggcaggaggagcagaagatcagctggtcgacatcaaa
gcagacccccaaatagtcacccggatgctttacagtttcctcgttcgctcaaataactcc
tggttccagcagttcgtccctgcagaacacgccagtcatctcaaggacagacctatgaac
atgtacatcggtcccatccagcagttcagtgaacccaccctcccggtcaagtatctgctg
gcttacctgaccggcagcgtcgtcaacgtcacccaggaaaactgccagaaccagaggcag
gatgaggacgacaaacggaacaaacatttttacaactacttctgggttcagggcacagcg
ccccctaacagcacagagagggtgggattttgtgtccgctccacagttcgtcattccaaa
gctgtgtctccggcgtttgaactggagcagtacaccactgcggactactccacgtggaca
gagtccaggtggaagcccatcacaggacgcatattcctggtggccagtcacgagctggag
atgttgacgctggctgttggcatcggtgtgctgctaacgtcgctcttcctcacgtatgcc
atcagcgccaaggccgacatactcttcaattccgtaagggaacccaccaacgccacctac
tga
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