Cynoglossus semilaevis (tongue sole): 103396848
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Entry
103396848 CDS
T04866
Symbol
vcpip1
Name
(RefSeq) deubiquitinating protein VCIP135 isoform X1
KO
K11861
deubiquitinating protein VCIP135 [EC:
3.4.19.12
]
Organism
csem
Cynoglossus semilaevis (tongue sole)
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
csem01002
]
103396848 (vcpip1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csem04121
]
103396848 (vcpip1)
Enzymes [BR:
csem01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
103396848 (vcpip1)
Peptidases and inhibitors [BR:
csem01002
]
Cysteine peptidases
Family C64
103396848 (vcpip1)
Ubiquitin system [BR:
csem04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
103396848 (vcpip1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VCIP135_N
OTU
OTU1_UBXL
ubiquitin
DUF5817
Motif
Other DBs
NCBI-GeneID:
103396848
NCBI-ProteinID:
XP_008333318
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All DBs
Position
20:14864041..14871673
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AA seq
1163 aa
AA seq
DB search
MSLLHSSRKKDKRVLCGTCPDPKCQARLFFPAHGSVSIECTECGQRHEQRNLLQVQEVTD
PDVVLHNLLRNALLGVTGAPKKGTELVKVMGLSNYHCKLLSPVLSRYGMDKQTGKAKLLK
DMNQGEMFDCSLLGDRAFLIEPDHVSTMGYGKDRSGSLVYLHDTLEEVKKANGNRECLIP
VHVDGDGHCLVHAVSRALVGRELFWHALRENLKQNFKQNLSHYKALFQDFIDSAEWEDII
NECDPLFVPPEGVPLGLRNIHIFGLANVLHRPIILLDSLSGMRSSGDYSATFLPGLVAEE
QCRGKDGKLNKPICIAWSSSGRNHYIPLVGIKNTMLPKLPARLLPKAWGVPQELIKKYIK
LEQDGSCVIGGDRSLQDKYLMRLVNAMEEVFMEKHGIHPSLVADVHQYVYRRTGVIGIQP
EEVIEAAKRSVIENRLHRCLICGALSELHVLQEWLVPGGKLYNLAKSTHGQLRPDKNYSF
PLNNVVCSYDPNKDVLVPDYKLSSFNTCNWCHGTSVRHVRGDGSVVYVDGDRTNAHSQGG
KCGCGFKHYWDEKEYDNLPEAFPITLEWGGRVVRETVYWFQYETDSALNSNVYDVAMKLV
TKHFPGEFGSEILVQKVVNTILHHTAKRNPDEYNPVSIDGAHVQRLKDAEEVRPAAAEPQ
PPTKIILTGQKAKTLHKEELTMSRAERSLQQSISEQASVAQKRRTDQLKQEQRGHCRTKS
SSSPPSGSPATSSSSAPATPTKSASSSPSSVSNKEKKIRVTTSDGRQAMLTLQPQTTFSE
LQRSVANQFGVPAARQCIRYGFPPKELAPPRDGEENEPLVLQHGDRVTVEILKGPEGRGP
GPASVPRASSSNPILDPVNNEDNRTSSRMSSRELQDNIDLEMSSLCLLATLMGEDVWSYA
KKLPQLFQQGGVFYNIVKKDMGLNDGKHCTLPHLTGKTFVFNEAEQRLELCVDAAGHFPV
SPDVEELVREAVVQLRTEPAATRGSRESSPGQSALRLGSGGVVRKKEPLQNVAAFQGKGH
SLGSGVGSSPSPEHRPITRQHSGGVDLSSSVSDVSADAGGELVRVAPGFVTMKDGRGLDP
SLMEQQRRKLQEMVSSIQASMECHLREQQSATASVAAGDGAVKERAQEDRSADGLPCGDL
EESDDMESQEAGQGGATEPMDHS
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgctccacagttccaggaaaaaggacaagcgcgtcctgtgcggaacctgcccg
gaccccaaatgtcaggctcggctcttcttccccgctcacggctccgtcagtatcgaatgc
acagagtgcggccagagacacgaacagcggaacctgctgcaggtccaggaggtgacggac
ccggacgtggttctgcacaacctgcttcggaacgcgctgctcggcgtcaccggggccccg
aagaagggaaccgagctggtgaaggtgatgggtctgtccaactaccactgcaagctgctg
tcaccggtgctgagcagatatgggatggacaaacaaacggggaaggccaagctgctgaag
gacatgaaccaaggtgagatgttcgactgctctctgctgggagacagggccttcctgatc
gagccggaccacgtgtccaccatgggctacggcaaagaccgctccggaagcctggtctac
ctccacgacacgctggaggaagtcaaaaaagccaatggcaacagagagtgtctcatcccc
gtccacgtggatggagacggccactgcctggtccacgccgtctccagagcgctggtgggc
agagagctgttctggcacgccctgagggagaacctgaagcagaatttcaagcagaacctg
agccactacaaagctttgttccaggacttcatcgactctgcggagtgggaggacatcatc
aacgagtgcgaccccctctttgtgccacctgagggcgtgccgctcggactgcgcaacatc
cacatatttggtcttgccaacgtcctgcaccggccaatcatcctgcttgactcgttgagt
ggaatgaggagttccggcgactactccgccaccttcctgcccggcctggtggccgaggag
cagtgtcggggcaaggacgggaagctgaacaaaccgatctgcatcgcctggagcagctcc
ggcaggaaccactacatacccctggtggggataaagaacaccatgctgcccaagctgccc
gcacgcctgctgcccaaggcgtggggcgttccacaggaactcatcaagaagtacatcaaa
ctggagcaggacgggagctgcgtgatcgggggcgaccgcagcctgcaggacaagtacctg
atgagactggtcaacgccatggaggaggtgttcatggaaaaacacggcatccacccgtca
cttgtggccgacgtgcatcagtacgtctacaggagaaccggtgtgatcggcatccagccg
gaggaggtgatcgaggcggccaagaggtcggtgattgagaaccggctgcaccgctgcctc
atttgtggcgccctgtcggagctgcatgtcctgcaggagtggctggttcctggggggaag
ctctacaacttagccaagtccacgcacggccagctgcgtccggacaagaactacagcttc
ccactcaacaacgtggtctgctcttacgaccccaacaaggacgtgctggtgccggactac
aaactcagttccttcaacacctgcaactggtgccacggcacatcggtccgacacgtacgt
ggcgacggctcggtagtgtacgtcgacggggacagaaccaacgcccactcccaagggggt
aaatgtgggtgtggcttcaaacattactgggatgaaaaggaatacgacaacctccctgaa
gccttccccatcaccctggagtggggcggccgcgtggtccgggagacggtgtactggttc
cagtacgagaccgactctgcgctgaacagtaacgtctacgacgtggccatgaagctggtc
accaaacacttccccggggagtttggcagtgaaatcctggtccagaaggtggtgaacact
attctgcaccacaccgccaagaggaaccccgacgagtacaacccggtgtccatcgacggc
gctcacgtccagcgtctgaaggatgccgaagaggttcgaccggcagcggcggagcctcag
cctccgaccaaaataatcctgacgggtcagaaagcaaaaacgctccacaaggaggagctg
acgatgagtcgggcggagcgcagcctccagcagagcatcagcgaacaagcctccgtcgcc
cagaaacgacggaccgatcagctgaagcaggagcaaagaggccactgtcgaaccaagtct
tcctcgtctccgcccagcggctcgccggcgacgtcctcctcctctgctccggccacaccc
accaagtccgcttcatcctctccttcctccgtatccaacaaggagaagaagattcgcgtg
acgaccagcgatggcaggcaggccatgctgacgctgcagcctcagaccaccttctcagaa
ctccagcggagcgtagccaaccagtttggcgtgccagcagcgaggcagtgcatacgatat
ggcttcccacccaaagaactggccccacccagggacggcgaggaaaacgagcccttggtg
ctgcagcatggtgacagggttacggtggagatactgaagggccccgagggccgtggcccc
ggccccgcctccgtccccagagcctccagttcaaaccctatcctggacccagtgaacaat
gaggacaataggacgtccagcaggatgagcagccgtgaactgcaggacaacatcgacctg
gagatgtcctcgctctgccttctggcaacactgatgggtgaagatgtgtggtcttacgct
aagaagcttccacagttattccaacagggcggcgtcttctacaacatcgtgaagaaggac
atgggtctgaatgatggtaaacactgcactttgcctcatctgacggggaagacgtttgtc
tttaatgaagctgagcagcgtttggagctgtgtgtggacgctgctggacacttccccgtc
agtcctgatgtagaggagctggtgagggaggccgtggtgcagctgcgcacagaaccggcg
gccaccagaggcagcagagagtccagcccggggcagagcgccctgaggctgggcagcggt
ggcgtcgtccgtaagaaggaacctctgcagaatgtggcagccttccagggcaaagggcat
tctctgggcagcggcgtaggctcctccccttcacctgagcaccggccaatcacacggcag
cacagtggcggcgtggacctgagttccagcgtgtcggacgtctccgctgacgccggtgga
gagctggtgcgcgtggcgccaggttttgtaacgatgaaggacggccgcggtctggacccg
agtctgatggaacaacagcgtaggaaactgcaggagatggtttcttcaatccaggcctcc
atggaatgtcatctgcgtgagcagcagagcgccaccgcctccgtcgctgctggtgatgga
gccgttaaggagcgggcccaggaggatcggtcagctgacggattaccttgtggggatctg
gaggagtcggacgacatggaaagtcaggaagctggacagggtggcgccaccgagcccatg
gatcactcctga
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