KEGG   Cynoglossus semilaevis (tongue sole): 103396965
Entry
103396965         CDS       T04866                                 
Name
(RefSeq) ataxin-2-like isoform X1
  KO
K23625  ataxin 2/2L
Organism
csem  Cynoglossus semilaevis (tongue sole)
Brite
KEGG Orthology (KO) [BR:csem00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csem03019]
    103396965
Messenger RNA biogenesis [BR:csem03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     103396965
SSDB
Motif
Pfam: SM-ATX LsmAD PAM2 LSM
Other DBs
NCBI-GeneID: 103396965
NCBI-ProteinID: XP_008333430
UniProt: A0A3P8VFR9
LinkDB
Position
W:3174696..3227073
AA seq 1037 aa
MSMKAGGNRSKTGSGNASGAHASGSGGNSGGRPNLGRGRHSGKGPTAVFFNGVYANMRMV
HFLTSVVGTKCELKVKNGAVYEGVFKTYGPECDLVLDAAHRKSAELSIGPRKEDIMESII
FKASDVVVVTFKDVDLSFAKKVSPDADNFTDAAVGGWINGEHKEKDLKPWDGGETHNSDS
LESLDTDVSNGWDPNDMFKYNEEKYGVLSTYDSSLATYTVPLERDNSEEFLKREARAAQL
AEEIEASAAYKARAALENDERSEEDKYTAVVRGERETHTLSSREYFSPGQRNREGMSWGP
GRQNFPRLSQSSVGPWTPRPGPHDYSSNSGADQRVVNGGPPRMSPKSQRTPRTHRGPPCR
TSGIPSGVDLISHNAAGDVPVTPPTRNSSSGGTWSSVVSGAHRPRSPRQNSVGGASPGSS
SLSPQIGAAPVETLAAPTSASPIAASTAPNMVASSSGDAKECRIQENKQTSPSANKENIK
PLDSSPSISRPVCKGPPSMASGHRKQIDNLKKFSVDFRLQSSSNPDPTLDQMMTKPPRDP
ADKPKDLPTDKTSTVGRDGTEEGVAVIAASGLGSATASSTTTNTNKPGSPAALSLSPSTL
DIKRTGMDVTSQGVQTTGTSTFSGPKHEEKEDKKEAVQDQVGKSTLNPNANEFKPRFNTQ
PKPANTPTPPRPQGQPSPSILVQQPPTIYGQPVCFPQMYPLTSVSPGVQKSIIWKSPAMY
QVQMPHMTVSQSKPYRPGKVSNMPQQRSDQTMMHPATAAGPPIVAPSPAYTAQYFTCSPQ
QFTSQPLVQQMTHYQSQAQHVFSPVMQSSARMMASTHGQPSLVSSSTAQYPEQTHTMYMS
PGPMPQQYAHSSAALHPHPQHPQPSATPTGQAQQGGPPQHGGPPSHPAASPVQHPQAAAA
VAAQALHLANQTSQQQMYSALAHTPPSMTPGPNSQSPQASFPSAQQTVYIHPQQVQHGYN
PNHMAHVQQAHMQSGIIPSHHPAPTHPPMMLMTTQGHPGVPQPPMPQTALNPIPVSSTTH
FSYLAHSQVQPHHQQQL
NT seq 3114 nt   +upstreamnt  +downstreamnt
atgtcaatgaaggccggtggaaatcgaagcaagaccggcagtggcaacgcctctggtgcc
catgcctctggatctgggggaaacagcgggggaagaccgaatctgggcaggggaagacac
agcggtaaaggtcctacagcagtcttttttaatggggtgtatgcaaatatgaggatggtc
catttcttgacttcagtagtggggaccaagtgtgagctgaaagtaaaaaatggagcagtc
tacgaaggagtctttaaaacttacggtccagagtgtgacctggtattggatgcagcccac
agaaagagcgcagagctcagcataggccccaggaaagaggacattatggagagcatcatt
ttcaaggcctcagatgttgtggtcgtgaccttcaaagatgtcgacctgagttttgccaag
aaagtctcccctgatgcagataacttcacagatgcagcagtgggtggatggatcaatggt
gagcacaaagagaaagatctgaagccatgggacggaggagagacccacaactcagacagc
ctagagtctctcgacacagatgtgtcaaatgggtgggaccccaacgacatgttcaagtac
aatgaggagaagtacggagtattgtctacatatgacagcagcctggccacatatacggtc
cctctggagcgagacaactctgaggagttcctcaagagggaggcgcgcgctgcccagctt
gcagaggagattgaggccagtgctgcgtacaaggcacgtgctgccctggagaatgacgag
aggtcagaggaggataaatatactgctgtggttcgaggggaaagggagactcacacactg
agtagcagagaatacttttctccaggtcagagaaacagggagggaatgtcatgggggcct
ggacgtcagaattttcctcgtctgtctcaaagctcagttggaccttggactcctcgaccc
ggtcctcatgactacagctccaattctggggccgaccagagggttgtcaatggaggtcca
cccaggatgtctccaaaatcccagcgtacaccacgtactcacagagggccgccctgcagg
accagtggtataccatcaggagtagacttaatttcccacaatgctgcaggagatgtccca
gtgactccaccgacgaggaacagctcttctggagggacgtggtcctcagtagttagtgga
gctcacagacctcggtctcctcgacagaacagtgtgggcggagcctcccctggctcctct
tccctgtcccctcaaataggagctgctcctgtggaaactcttgctgcaccaacgtcagct
tctcctattgctgcaagcaccgctcccaacatggtcgcgtcttcatcaggagatgcaaaa
gaatgtcgtattcaggagaacaaacaaacatccccctctgctaacaaagagaacatcaag
cccttggacagctcacctagtatcagcagaccagtatgtaaaggacccccttctatggcc
tcaggccacagaaaacaaatagataatttaaagaaattcagtgtagattttaggttgcag
tctagttcaaatccagaccccacccttgaccagatgatgaccaagcctcccagagatcca
gcagacaaacctaaagatcttcctacggacaaaacatccacagtgggacgagatggcacc
gaggaaggcgtcgcagtgatcgctgccagcggcctcggcagcgccaccgcttcatccacc
accacaaacaccaataaacctggcagccctgctgcactctccctgtctccatcaaccctg
gacatcaagaggacaggaatggatgtgacttcacagggggttcagacgacgggcacgtcc
acattcagtgggcccaagcatgaagaaaaggaggacaaaaaggaggcagtacaagaccaa
gtaggaaaatcaaccctgaatccaaatgccaatgagttcaaaccccggttcaacacacag
cccaaaccagccaacaccccgacccctcctcggcctcagggtcagcccagcccctccatc
cttgtacagcagccccctacaatctatggtcagccagtctgcttcccacaaatgtacccg
ctcacttcagtcagccctggagtgcagaaaagcataatatggaagtctccagccatgtat
caggtccagatgccccacatgacggtcagccagtctaaaccttacagaccaggtaaagta
tccaacatgccccagcagaggtcagaccagaccatgatgcacccagccacagcagcagga
ccacctattgtagcaccaagtcccgcctatactgcccagtacttcacctgcagcccacag
cagttcaccagtcagccactggtccagcagatgacccactaccagtcacaggcgcagcat
gtgttcagtccagtgatgcagagcagtgccagaatgatggcttccacacacggacaaccc
agcctcgtctcttcttcaaccgcacagtacccagagcagacacacacaatgtatatgtct
ccagggccgatgcctcagcagtacgcccactccagcgctgccttgcaccctcacccacaa
cacccacagccgtctgccacgcctacaggtcaagctcagcagggtggtcccccacaacac
ggcggtcctcccagtcatccagctgctagtccggtacagcacccacaggcagcagcagca
gtggcagcccaggctctccacttggccaatcagacttcacagcagcagatgtactcagct
ctggcccacacgcccccctccatgaccccagggcccaactctcagtctccacaggcatct
ttcccctctgcccagcagactgtttacatccacccgcaacaggtgcagcacggctacaac
cccaaccacatggctcacgtgcagcaggcccatatgcagtctggcatcattccatcccac
cacccagcacccacccaccctcccatgatgctgatgaccactcagggtcatcctggggtt
ccacagccgcccatgcctcagacggccctcaaccccatccctgtttcttctaccacacat
ttctcctacctggcacattcacaagtgcagcctcatcatcagcagcaactgtag

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