Cynoglossus semilaevis (tongue sole): 103397013
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Entry
103397013 CDS
T04866
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-like
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem03082
ATP-dependent chromatin remodeling
csem03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103397013
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
103397013
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csem01009
]
103397013
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csem03021
]
103397013
03036 Chromosome and associated proteins [BR:
csem03036
]
103397013
Protein phosphatases and associated proteins [BR:
csem01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
103397013
Transcription machinery [BR:
csem03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
103397013
SWI/SNF complex
103397013
Chromosome and associated proteins [BR:
csem03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
103397013
PBAF complex
103397013
SWI/SNF complex
103397013
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
DUF1679
Motif
Other DBs
NCBI-GeneID:
103397013
NCBI-ProteinID:
XP_008333487
UniProt:
A0A3P8VNP6
LinkDB
All DBs
Position
W:complement(5167554..5173279)
Genome browser
AA seq
372 aa
AA seq
DB search
MALSKTFGPKPVKFQLEEDGDFYMIGSEVGNYLRMFRGSLYKRYPSLWRKLASVEERKKI
VELSHDHGYTQLATSVTLLKASEVEEILEGNDEKYKAVSISTEPPAYLREQKAKRNSQWV
PTLPNSSHHLDAVPCSTTINRSRLGRDKKKPFPLCFDDHNPAVIHENASQSEVLVPIRLD
MEIEGQKLRDAFTWNMNEKLMTPEMFAEILCDDLDLNPLTFVPAIASAIRQQIDSYPTDS
ILENQTDQRVIIKLNIHVGNISLVDQFEWDMSERENSPEKFALKLCSELGLGGEFVTTIT
YSIRGQLSWHQRTYAFSENPLPMVEIAIRNTGDADQWCPLLETLTDAEMEKKIRDQDRNT
RRMRRLANTPAW
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcagtaaaacgtttggtccaaaacctgtgaaattccagctggaagaggatggg
gacttctacatgattggttcagaggtaggaaactacctgcgtatgtttagaggctctctg
tataaacgatacccatcactgtggaggaaattggcgtctgtagaagaacgcaagaagatt
gtggagttgtcccacgatcatggttacactcagctggctaccagtgtgactctcctgaag
gcttcagaggtggaggagatattggaaggaaacgatgagaagtacaaagcagtttccatc
agtaccgagccacctgcctacctcagggaacagaaggcaaaaagaaacagtcagtgggtt
cctacactgcccaacagttctcaccatctggatgcagttccctgttccacaaccatcaac
cgcagtcgactgggccgtgacaagaagaaacccttcccactgtgctttgacgaccacaat
ccagctgtaattcacgagaacgcctctcagtctgaagttcttgtgccaatccgtcttgac
atggagattgagggacagaagcttagagatgctttcacctggaatatgaatgaaaaacta
atgacacctgagatgtttgctgagattctttgtgacgacctggacctcaatcccctgacc
tttgttcctgccatcgcctctgccatccggcagcagatcgattcttaccccacagacagt
atcttagagaaccagacggaccagagggtcatcatcaagttgaacatccatgtggggaac
atttctctggtggaccagtttgagtgggacatgtcagagagggagaactctccagagaag
tttgccctcaagctctgctcagagttaggtctgggcggagagtttgttaccaccattacc
tacagtatccgcggtcagctgagctggcaccaaaggacgtatgcctttagtgaaaatcct
ttgcccatggtggaaattgccattagaaacacaggtgacgcagaccagtggtgccctctg
ttggagactctgacagacgcagagatggagaagaagattagagaccaggacagaaacaca
aggagaatgaggcgattggcaaacacacctgcgtggtag
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