Cynoglossus semilaevis (tongue sole): 103397312
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Entry
103397312 CDS
T04866
Name
(RefSeq) ubiquitin-protein ligase E3B-like isoform X1
KO
K10588
ubiquitin-protein ligase E3 B [EC:
2.3.2.26
]
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
103397312
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csem04121
]
103397312
Enzymes [BR:
csem01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
103397312
Ubiquitin system [BR:
csem04121
]
Ubiquitin ligases (E3)
HECT type E3
103397312
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
DUF7462
Motif
Other DBs
NCBI-GeneID:
103397312
NCBI-ProteinID:
XP_008333748
LinkDB
All DBs
Position
Z:177221..185866
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AA seq
1083 aa
AA seq
DB search
MYGSPLIVYISIRCTMFGVPKSSKSEFLDKARQAREERKGQKEKERAATQIQALVRRFLC
RCRLQKQIRKEVDDYFQASEPGTSKRNALSIFKIAQKLMFIFCQEDKMRFEKLCRAILAS
MEVENEPKVWYVSLALSKDLTIPWLKQIKDVLWTCCQLLKNLKPDILQDNKLVTLYLTML
VTFTDTSTWRIVRGKGEAFRPALIKICENIMGHLNQKGFYSMLQILLTNGLARSKPSLSK
GSLTAVFTLSLRPVIAAHFSDNLLRSFLVHIMSVPALISHLTMLAPESMTTIQTHDLLRK
FILFLSQEEQCSDICVCLEGSHTLCLLGNLIHLGYINEKVLEEEAHHFVKDLTVMLSYCQ
RYVSQKKSNLTHWHPVLGCISQNVDYGLNESMPLVTKQLQYLWGVSVIRTLFSDVLSKKL
ESQEPTPPPPQPSTSQNNLPVKNLFKRAFQKSASVRNILKPVGGKRVDSAEVQKVCSICV
LYQTALSTLTQIRLQILTGLTHLDDLLPKLWAFICELGPQGGLKLFMECLNNDTDESKQL
LSMLMLFCDCSRHLITILDDIEVYEEQTSFKIEELITISSFLNTFVYKMVWDGILENAKG
EKLELFHSVHGWLMVLYERDCRRRFTPDDHWLRKDLKPSLLFQELEKGKKRAQLLLQYIP
HVIPHKNRVLLFRNIVTKEKENLGLVETSSASPHVTHITIRRSRMLEDGYDQLRRLPVNS
IKGVIRVKFVNDLGVDEAGIDQDGVFKEFLEEIIKKVFNPALNLFRTTSGDERLYPSPTS
YIHENHLQLFEFVGKMLGKAVYEGIVVDVPFASFFLSQVLGHHHSTFYSSIDELPSLDSE
FYKNLTSIKRYDGDVGDLGLTLSYDEDVMGQLVCHELIPGGKTMAVTNENRISYIHLMAH
FRMHTQIKEQTAGFIRGFRCIINPEWLHMFSTPEVQRLVSGDNAEIDLDDLKKHTVYYGG
FHSSHRVIIWLWDILSSDFNADERAMFLKFVTSCSRPPLLGFAYLKPPFSIRCVEVSDDQ
DTGDTLGSVLRGFFTIRKKEPGGRLPTSSTCFNLLKLPNYSKKSILRDKLRYAISMNTGF
ELS
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atgtacggatcacctctcattgtttacatttcaattcggtgcacaatgtttggtgtacct
aaaagttccaagtccgagttcctggacaaagcaaggcaggccagggaggagaggaaaggt
cagaaggagaaggagagagcagcaacccagatccaagctctggttaggagattcctctgt
cgatgcagactgcagaagcaaattaggaaagaagttgatgactatttccaagcctctgaa
ccaggcacatcaaaaagaaatgcactttcaattttcaaaattgctcagaagttgatgttt
atattttgtcaagaggacaagatgaggtttgaaaagctctgtcgtgctattctggccagc
atggaggttgaaaatgaacctaaagtctggtatgtgtcattggccctttccaaagatctt
actataccctggctcaaacagattaaagatgtcctgtggacctgctgtcagttattgaaa
aacctaaagcctgacatacttcaggacaataaattggttacactgtacctcaccatgctg
gtaacattcacagacacgtcaacctggaggatagtgcgtggaaagggagaagctttccga
cctgctttaataaagatctgtgaaaacatcatgggccatctcaatcaaaaaggattttat
tccatgcttcagatcttgttgaccaatggcttggctcgctctaagccctccctgtccaaa
ggcagtctcacagcagttttcaccctgtcattaaggccggtcattgctgctcacttctct
gacaacctcctgagatcatttcttgtgcacatcatgtcagttcccgctctcatatcccac
ctcactatgctagcaccagagagcatgacaacaatccagacccatgacctcctgaggaag
ttcattttgtttctcagtcaggaagaacagtgttcagacatctgtgtatgtctggagggg
agccacacactctgcttacttggtaatctgattcacttgggttacataaatgagaaggtt
ctggaagaggaggcccatcattttgtgaaggacctgactgtcatgttgtcatactgccag
agatatgtgtcccagaagaaatccaacctcacacactggcatcctgtgctcggctgcatc
tcccaaaatgtagactacggtctgaatgaatcaatgccactggtcaccaaacagcttcag
tacctttggggtgtctctgtcatccgaacgctcttcagtgatgtcctgtctaaaaagctt
gaaagtcaagaacctactcctccacctccacagcccagcacctcacagaacaacctgcct
gttaaaaatctttttaaacgagcgtttcagaagtccgcttcagttaggaacatcctgaaa
ccagtaggtgggaagcgagtcgactcggccgaggtccagaaggtgtgcagcatctgtgta
ctgtaccagaccgctctgtctacactaacgcaaatacgcctccagattctcacaggtctg
acacaccttgatgaccttttgccaaaactgtgggccttcatctgtgagcttggtcctcag
ggaggactcaaactcttcatggagtgtctgaacaacgacacggacgagtccaagcagctt
ctgtccatgctcatgctgttttgtgattgctcacggcatctcatcacaattctcgatgac
attgaggtgtacgaagaacaaacgtccttcaagatagaagaactcatcactatctcctcc
tttctgaacacatttgtgtacaagatggtatgggatggcatcctagagaacgcaaaagga
gagaaactggaattgttccacagcgttcacggctggctgatggttctctacgaacgagac
tgcaggcgacggttcacaccggacgaccactggctacgcaaggacctgaaacctagcctg
ttgttccaagagctagagaaagggaaaaaaagagctcaacttttgttgcagtacatcccc
catgtcattccacataaaaacagggttctgttgtttaggaacattgtaacaaaggaaaag
gaaaacttgggcctggttgaaaccagctcagcttcacctcatgtcacacatattaccatc
cgtcgttcacgtatgttagaggatggatatgaccaactacgtcgtttaccggtgaattcc
ataaaaggtgtcatccgtgtgaagtttgtgaacgacttgggagtagacgaggctggtatc
gaccaggatggtgtctttaaggagtttctggaggagattattaaaaaagtgttcaatcca
gctctcaacctattcaggactacgagtggagatgaaaggctgtatccttcacccacatct
tatatccatgagaaccacttacagctatttgagtttgtggggaagatgctcgggaaagct
gtctatgagggcattgtggtagatgtgccgttcgcctcctttttcctcagtcaggtcttg
ggtcaccatcacagcaccttctacagctccattgatgagcttccttccctggactcagag
ttttacaaaaacctcacatccataaagcgttatgatggagacgtgggggatttaggactg
acactctcctatgatgaggatgtcatgggacagctcgtttgtcatgagctcatacctggt
gggaaaacaatggccgtcaccaatgagaacaggatcagctacatccacctcatggctcac
ttccgtatgcacacacagattaaagaacaaacggcaggttttatccgaggttttcgctgc
atcattaatccagagtggctgcacatgttttcaacacctgaggttcaacgtctggtctca
ggagacaacgctgaaattgatcttgatgacctcaaaaaacacacagtttattatggagga
tttcacagcagccatcgagtcatcatctggttgtgggacatcctgtccagtgactttaat
gctgacgagagagctatgttcctaaaatttgttaccagctgttcgaggccacctctgcta
ggattcgcctacctcaagccacctttctccatccgctgtgtggaggtttcagacgatcag
gacactggtgacacccttggcagtgttctgagaggcttttttactattcgcaagaaggaa
cccgggggtcgacttcccacttcctctacgtgcttcaacctgctgaagctgcccaactac
agcaaaaaaagcatccttcgtgacaagctgcgctacgcgatcagtatgaatacaggcttc
gaactgtcctaa
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