Cynoglossus semilaevis (tongue sole): 103397401
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Entry
103397401 CDS
T04866
Symbol
smarcb1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem03082
ATP-dependent chromatin remodeling
csem03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103397401 (smarcb1)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
103397401 (smarcb1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csem01009
]
103397401 (smarcb1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csem03021
]
103397401 (smarcb1)
03036 Chromosome and associated proteins [BR:
csem03036
]
103397401 (smarcb1)
Protein phosphatases and associated proteins [BR:
csem01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
103397401 (smarcb1)
Transcription machinery [BR:
csem03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
103397401 (smarcb1)
SWI/SNF complex
103397401 (smarcb1)
Chromosome and associated proteins [BR:
csem03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
103397401 (smarcb1)
PBAF complex
103397401 (smarcb1)
SWI/SNF complex
103397401 (smarcb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
DUF1679
Motif
Other DBs
NCBI-GeneID:
103397401
NCBI-ProteinID:
XP_008333872
UniProt:
A0A3P8W591
LinkDB
All DBs
Position
Z:complement(3128539..3134304)
Genome browser
AA seq
373 aa
AA seq
DB search
MMALSKTFGQKPVKFQLEEDGDFYMIGSEVGNYLRMFRGSLYKRYPSLWRKLASVEERKK
IVESSHDHGYTQLATSVTLLKASEVEEILEGNDEKYKAVSISTEPPAYLREQKAKRNSQW
VPTLPNSSHHLDAVPCSTTINRSRLGRDKKRTFPLCFDDHDPAVIHENASQSEVLVPIRL
DMEIEGQKLRDAFTWNMNEKLMTPEMFAEILCDDLDLNPLTFVPAIASAIRQQIESYPTD
SILEDQTDQRVIIKLNIHVGNISLVDQFEWDMSERENSPEKFALKLCSELGLGGEFVTTI
AYSIRGQLSWHQRTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAEMEKKIRDQDRN
TRRMRRLANTPAW
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgatggcgctcagtaaaacgtttggtcaaaaacctgtgaaattccagctggaagaagat
ggagacttctacatgattggttcggaggtgggaaactacctgcgtatgttcagaggctct
ctgtataaacgatacccatcgctatggaggaagttggcatctgtagaagaacgcaagaaa
attgtggagtcgtcccacgatcatggttacactcagctggccaccagtgtgactctcctg
aaagcttcagaggtggaggagatattggaaggaaacgatgagaagtacaaagcagtttcc
atcagtaccgagccacctgcctacctcagggaacagaaggcaaaaagaaacagtcagtgg
gttccaacactgcccaatagttctcaccatctggatgcagttccctgttccacaaccatc
aaccgcagtcgactgggccgtgacaagaagaggaccttcccactgtgttttgatgaccac
gatccagctgtaattcacgagaatgcctctcagtcggaagttcttgtgccaatccgtctg
gacatggagattgagggacagaagcttagagatgctttcacctggaatatgaacgaaaaa
ctaatgacacctgagatgtttgctgagattctttgcgatgacctggacctcaatcccctg
acctttgttcctgccatcgcctctgccatccgacagcagatcgagtcttaccccacagat
agtatcttagaggaccagacagaccagagggtcatcatcaagttgaacatccatgtgggg
aacatttctctggtggaccagtttgagtgggacatgtcagagagggagaactctccagag
aagtttgcactcaagctctgttcagagttaggtctgggtggagagtttgttaccaccatt
gcctacagcatccgcggtcagctgagctggcaccagaggacgtatgccttcagcgagaat
cctttgcccacggtggaaatagccattagaaacacaggtgacgctgaccagtggtgccct
ctgttggagactctgacagacgcagagatggagaagaagattagagaccaggacagaaac
acaaggagaatgaggcgattggcaaacacacctgcgtggtaa
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integrated database retrieval system
