Cynoglossus semilaevis (tongue sole): 103397606
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Entry
103397606 CDS
T04866
Name
(RefSeq) RNA exonuclease 1 homolog isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
103397606
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csem03009
]
103397606
Ribosome biogenesis [BR:
csem03009
]
Eukaryotic type
Pre-60S particles
RNases
103397606
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EloA-BP1
RNase_T
Motif
Other DBs
NCBI-GeneID:
103397606
NCBI-ProteinID:
XP_008334149
UniProt:
A0A3P8WSZ5
LinkDB
All DBs
Position
Z:7930976..7939817
Genome browser
AA seq
1052 aa
AA seq
DB search
MFPRSGLFADINGPFSKQGSSTRPQDLYEHDSTAGIPSTSSSFSANLGTAGIDEGIPELQ
RINEEIETVKHEVELEQRRLFQYQTSLGEGSNTPPSFPVYKVEGTRKKEGRAIDAMAANS
PENKYLVDNSKPKTCLEYGPMSDFSAGLWFCGLSNEQRVLDRNEPSPCDQNMFPVLLDES
TEDCPLSIDCPLSPARKRTKYEKRDDYSADNPQDEKQLKESKPTLATACPQQALEEMHCD
KYECEQREGNPDYGGDVNNASKGFENIPIPVDSSVTDLTEGLYLEHQESLSQLLDIDTSS
VEIETNDWLSSEIQMQSLLLDNQEMANTNPATMDTAFNNQTSLAMSQQQPHSYNSSHQMS
SMHNNLANEAIPPESSHQPSQKDNVIIISSTEDEDLNYSDVDLSESDPMEECYRIFMEAN
ENLKEPEKEIKVPKELTVPSSDLLRKKWVAHEAKDTESKPERQILSSLCEPALGLGSQSS
VTSNIHQVQQRAPMLTSTVNGGQAFVSFTSQRNPETQTNAVHTTWAPPITQPVPVLNACT
HYPPLENAVIEVGNNFQLIIPEGTFPLPMSSVNSPLTSVGPVPQSNSLGVKQLCFRAAVT
PVQRYHTTATMLIPAQSCRPSPCAVEAHLNPTPSTSYQPAVQPVKPVPTKRKLKQCKPAR
DEVTQDVRQRYVNMFTEEFHKTIPNIYDAFERAMAEERIVYNRSPNKLKYVSVAVNSLKR
LKNKTTAPSRGKKATSEIKKGKTSFNFQMCRENKDAALFQGLNNYVLLEEVLIENNYPIQ
NPEKPGSAVLFEDTNRGNMDPLKRTCCRCGTTYSVSKTGQHVRKEECNYHYGRGVERKVP
GGVETRYSCCQGVMGAPGCQVSQLHVHHSFSLDGFVSTRPRHPSDTHCPGVYSLDCAMCY
TVSGLELSRVSVANSRLQVIYDTFVRPDNELIDYNTRFSGVSEEDLKGNNTSLREVQETL
MSFINADTILIGHGLEKALCALKLLHGRVVDTSLVFPHRLGPPHKHPLNHLTAEFLRKII
QERVCGHDTAEDAAACMELMLWKTKKDGKLKK
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgtttcccagatcaggtttgtttgctgatattaatggtcctttttctaaacaagggtca
tctactagacctcaggatttgtacgaacatgactcaacagctgggatcccgtctacatca
agttccttctcagccaatttgggaacagcaggtatagatgagggtatcccggagctgcaa
agaatcaacgaggaaattgaaactgttaagcacgaggtggagttggaacaaagacgattg
tttcaataccagacttcactgggagagggcagcaatactccacctagtttccctgtttac
aaggttgagggcacacgcaaaaaggaaggtagagcaattgatgccatggctgcaaactcc
ccagaaaataagtatctggttgacaactcaaaaccaaagacttgtttagagtatggaccc
atgtctgatttttcagctggcttgtggttttgtggtttatctaatgagcagcgagtacta
gatagaaatgaaccctcaccatgtgaccagaatatgtttccagtgcttttggatgaatct
actgaggactgtcctctaagtattgactgccctctctcacctgccagaaaaagaaccaaa
tatgagaaacgggatgattattctgcagacaaccctcaggatgaaaaacagctaaaagaa
tccaaaccaacacttgcaactgcttgtccacagcaggccctggaggagatgcattgtgac
aaatatgaatgtgaacaaagagaaggaaatccagattatggtggtgatgttaacaatgcc
agcaaaggttttgaaaatatacctataccagttgacagtagcgtaactgacctcaccgaa
ggtctgtacctggaacatcaggagtcactatctcagctgcttgacattgataccagttca
gtagagatagagacgaacgactggctgtcttcagagatacagatgcagtcattgttgcta
gacaatcaggaaatggcaaacacaaacccagcaacgatggatacagctttcaataatcag
acctcattggcaatgagtcagcaacaaccccattcatataactcaagccatcaaatgtca
tcaatgcacaacaatttggccaatgaagccattccacctgaatccagccaccagccttca
cagaaagataatgttataatcatctccagcactgaagacgaagacctcaactattcagat
gtggacctgtctgagagtgacccaatggaggaatgttacagaatctttatggaggcaaat
gagaacctgaaagagcctgaaaaagaaatcaaggtccctaaggagttgactgtgccttcc
agtgatctactcagaaagaagtgggtagctcatgaggccaaagacacagagagcaaacct
gaacgccagattttgtcctcattgtgtgaaccagccttagggttaggctcccagtcttct
gtcacgtccaacatccatcaggtacagcagagagcgcccatgctgacttccacggtaaac
ggtggtcaggcatttgtctccttcacttctcagcgaaacccagagacccagactaatgct
gttcatactacttgggctcctccaatcacacaacctgttcctgtactaaatgcttgcaca
cattacccacctttggaaaatgctgttatcgaagtaggcaacaacttccagttgataatt
ccggaaggcaccttcccgttgcctatgtcttctgttaacagccctcttacctcagttggt
cctgtgcctcagagcaactctcttggtgtaaaacagctatgcttcagagctgcagtaaca
cctgtgcagagataccacactacagcaactatgcttattcctgctcagtcatgtagaccc
tcaccatgtgctgttgaagcacatttaaatccaaccccctctaccagttatcaacctgct
gtacagcctgttaagccagtgcccactaaacggaagttgaagcagtgcaagcctgccaga
gatgaagtgacacaggatgttcgtcagcgatatgtcaacatgtttacagaggagttccat
aaaaccatacccaatatttatgatgcctttgaaagagcaatggctgaagagagaattgtc
tacaaccgcagtccaaacaaactgaaatatgttagtgtggctgtgaattcactgaagagg
ctgaaaaacaagactactgctccatccagaggtaaaaaagccaccagtgagataaaaaaa
ggcaaaacctcctttaatttccaaatgtgcagagaaaacaaagatgctgccctctttcag
ggtttaaacaactacgttttactggaggaagtgctgattgagaacaactatcctatccag
aaccctgagaaacctggctcggcagttctatttgaagacactaacagaggcaacatggac
cctttgaagagaacctgttgtcgatgtggaactacatactctgtaagcaaaactggccaa
catgtccgcaaggaggagtgcaattatcactatggtagaggagttgagagaaaagtgcca
ggtggtgtggagactcgctacagttgctgtcaaggagtcatgggagcccctggatgccag
gtgtctcagttgcatgttcatcattcctttagccttgatgggtttgtctccaccaggccc
agacatccctccgacacccattgtcctggggtctactctttggattgtgcaatgtgttat
actgtcagtggtctggagctgtccagagtgagtgtggccaactctcgtctgcaagtcatc
tacgacacatttgtcagacctgacaatgagttgatcgactataacacgaggttttcaggt
gtcagtgaggaagatttgaaaggtaacaacacttcactcagggaggtgcaagagaccttg
atgagcttcattaatgctgataccattctgattggacacggcctggaaaaagccctctgt
gccttgaagctgctccatggtagagtggtggacacatcattggtgtttccccatcgtttg
ggacctccacacaagcaccccctcaaccatctcactgctgaattcctgcgcaagatcatt
caggagagagtttgtggacacgacactgcagaagatgctgcagcatgcatggagctgatg
ttatggaaaactaagaaggatggaaaactgaagaaatag
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