Cynoglossus semilaevis (tongue sole): 103397760
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Entry
103397760 CDS
T04866
Name
(RefSeq) clathrin heavy chain 1-like isoform X3
KO
K04646
clathrin heavy chain
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem04142
Lysosome
csem04144
Endocytosis
csem05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
103397760
04142 Lysosome
103397760
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
103397760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csem04131
]
103397760
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csem04147
]
103397760
Membrane trafficking [BR:
csem04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
103397760
Exosome [BR:
csem04147
]
Exosomal proteins
Proteins found in most exosomes
103397760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_PEP5_VPS11
TPR_COPA_B
TPR_Vps41
Gp18_dom_I
RMC1_N
Motif
Other DBs
NCBI-GeneID:
103397760
NCBI-ProteinID:
XP_008334352
LinkDB
All DBs
Position
Z:9207875..9234605
Genome browser
AA seq
1729 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGVNPANIGFSYLTMESDKFICIREKVGEQNQVVMIDMADPTN
PIRRPISADSVIMNPASKVIALKDAAKTLQIFNIEMKSKMKAHTMTEEVMFWKWISVNTV
ALVTDSAVYHWSMEGDSQPSKVFDRHVSLAGCQIINYRTDEQQKWLLLIGISAQQSRVVG
AMQLYSVDRKVSQPIEGHAATFGEFKLEGNTKPSTLFCFAVRSQAGGKLHIIEVGQPPAG
NQPFSKKAVDVFFPPEAQTDFPVAMQIGSKHGVIYLITKYGYIHLYDLESGVCIYMNRIS
AETIFVTAPYEATSGIIGVNKKGQVLSVCVEEENIINYASNVLQNPDLALRMAVRSNLAG
AEELFTRKFNTLFAQGSYSDAAKVASSAPKGILRTAETIRKFQSVPAQPGQASPLLQYFG
ILLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKTTDPTLALSMY
LRANVPNKVIQCFAENGQFQKIVLYAKKVGYTPDWVFLLRNTMRVNLDQGLQFAQMLVQD
EEPLANINQIVDVFMEGSLIQQCTSFLLDALKNNRPAEGHLQTRLLEMNLIHAPQVADAI
LGNQMFTHYDRAHIAQLCENAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLS
VDDSLDCLRAMLSSNIRQNLQLCVQVASKYHEQLGTESLVELFESFKSYEGLFYFLGSIV
NFSQDPEVHFKYIQAACKTGQIKEVERICRESSCYDPERVKNFLKEAKLTDQLPLIIVCD
RFDFVHDLVLYLYRNSLQKYIEIYVQKVNPSRLPVVIGGLLDVDCAEDVIKNLIMVVRGQ
FSTDELVEEVEKRNRLKLLLPWLESRIHEGCEEPPIHNALAKIYIDSNNTPERFLKENPF
YDSAVVGRYCEKRDPHLACVAYERGQCDLELIKVCNENSLFKSEARYLVRRKDPDLWEIV
LEENNPYRRQLIDQVVQTALSETQDPEEVSVSVKAFMTADLPNELIELLEKIVLDNSVFS
EHRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFKKFDVNT
SAIQVLIEHISNLDRAYEFAERCNEPAVWSQLARAQLQRDLVKEAIDSYIKAVDPSAYME
VVNAASKNNNWEDLVKFLQMARKKARESYVETELIFALAKTGRLAELEEFVSGPNNAHIQ
QVGDRCYEEGMYDAAKLLYNNVSNFARLASTLVHLGEYQAAVDSARKANSTRTWKEVCFA
CVDGEEFRLAQICGLHIVIHADELEDLISYYQDRGYFEELIALLEAALGLERAHMGMFTE
LAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQSHLWAELVFLYDKYEEFDNAVITMM
SHPTDAWKEGLFKDIIAKVANIELYYKSLSFYLEYKPLLLNDLLTILSPRLDHSRAVSFF
SKVNQLKLVKPYLRSVQNHNNKSVNEALNNLLTDEEDYQSLRASIDGYDNFDTIGLAQRL
EKHELIEFRRIAAYLYKGNNRWRQSVELCKKDKLYKDAMLYAAESKDAELAETLLQWFLE
EGRKECFTACLFASYDLLHPDVVLELAWRHNIMDFAMPYFIQVMREYLTKVDKLDDAESQ
RKTDDEGTEPQPMVIGQQLMLTAATTPVAPQPAYSGYGYPANSGGYPPQAAAGAAAAAAA
AAQPSLLMALTCRSLTDPPASPTPLLCPLSHALDLNFTEPSCSGSQQPT
NT seq
5190 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatactacccatacgattccaggaacatctgcagttgcagaacctgggcgtg
aacccggccaacatcgggttcagctatctgaccatggagtcagacaagttcatctgcatc
cgggaaaaagtgggcgagcagaatcaagtcgtgatgatagacatggccgaccccacaaac
ccgatcaggagaccaatctctgctgacagcgtcattatgaatcctgccagcaaggtcatc
gccctgaaagacgctgcgaagacactgcagatctttaacattgagatgaaaagtaagatg
aaggcacacaccatgacagaggaggtgatgttctggaagtggatctcggtgaacactgtt
gccctggtgaccgattcagccgtctaccactggagcatggaaggagattcccagccaagc
aaagtattcgatcgccacgtcagtctggcaggatgtcagatcataaactacagaactgac
gaacaacagaagtggctactgctgataggaatctccgcacagcaaagtcgagtagttggg
gcgatgcaactttactctgttgatagaaaagtgtcgcagccaatcgaaggtcatgctgcc
acctttggagagtttaaattggaaggaaataccaaaccctccactttgttctgctttgct
gtgcgctctcaggctggagggaagcttcacatcattgaagtgggtcagccacctgcagga
aaccagcctttctcaaagaaagctgtcgatgtgtttttcccacctgaggcccagacagac
tttcctgtagcgatgcagattggtagtaaacacggtgtaatatatttaatcaccaagtat
ggctacatccacctctatgacctggagtctggcgtgtgcatctacatgaatcgcattagc
gcagagaccatctttgttaccgctccttatgaagctacttcaggaattataggagttaac
aagaaggggcaggtgttgtctgtatgtgtcgaggaggagaacatcatcaactacgcctcc
aacgtccttcagaaccccgatctggccttgagaatggctgtcaggtcaaacctggctgga
gccgaggagctttttaccagaaagttcaatactctttttgcccagggcagttattcggac
gccgcaaaggttgcctcatcagcaccaaaggggatcctgcggacagcagaaaccattcgt
aaattccagagtgtcccagctcagcccggtcaggcctctccactgctgcagtactttggt
atactcctggaccagggacagctgaacaagtttgagtctctggaactgtgccgacccgtc
ctgcagcaaggccgcaaacaactactggagaaatggcttaaggaggacaagctggagtgc
tcagaggagttgggagatctggtgaagactacggatcccactttggctcttagtatgtac
ctcagagccaacgtccccaacaaggtcatccagtgctttgctgagaatggtcagtttcag
aagatagtgctgtacgctaaaaaggtcggctacacaccggactgggtgtttttactgaga
aacacgatgcgcgtgaacctcgaccaggggctgcagtttgctcaaatgctggtccaggat
gaggagcctttggccaatattaaccagattgtagatgtattcatggaggggagcctgatc
caacagtgcacctccttcctgctggacgctttaaagaacaaccggccagctgaaggacac
ctacagacacgtctgctggagatgaacctcatacatgctcctcaggtagcagatgcgatc
ctgggaaaccagatgttcacgcactacgacagagcccacattgctcagctgtgtgagaac
gcaggtctgctgcagagagctctcgaacactacaccgacctgtacgatatcaaacgagcc
gtagtgcacacacacctgctcaaccctgagtggttggtgaacttctttggctccttatca
gtggatgactcgttggactgtttaagagccatgctttcgtctaacatcagacagaacctg
cagctgtgcgttcaggtggcgtccaagtatcacgagcagctgggaacagaatccttggtg
gagctttttgaatccttcaagagttacgaaggactgttttacttcctgggctcaattgtg
aatttcagtcaagatcctgaagttcacttcaagtacattcaggccgcctgtaagacaggc
cagattaaggaagtggagcgaatatgcagagagagcagctgctacgatccagaaagggtt
aaaaactttctcaaggaagccaaactcacagaccagcttcctctcatcattgtgtgcgac
cgcttcgactttgtgcacgacctggttctgtacctgtaccgcaacagtctgcagaagtac
atagaaatctacgtacagaaggtgaaccccagtcgtttacccgtggtgataggggggctg
ttggatgtggactgcgcagaggatgtcatcaagaaccttatcatggtggtcagaggacag
ttttccacagatgagctggtggaggaggtggagaagaggaacaggttaaagctgctgctg
ccatggctggagtcccgtattcatgaaggctgcgaggagccgcccatacacaacgctctg
gctaaaatatacatcgacagcaacaacacaccggagcgcttcctgaaggagaatccgttc
tatgacagcgccgtggtcggacgatactgcgagaagagagaccctcacttggcctgcgtg
gcttatgagaggggacagtgtgacctggagctgatcaaagtttgcaatgagaactcgtta
tttaaaagcgaggctcgatacctggtgcggcggaaagatcccgatctttgggagatcgtt
ttggaagaaaacaatccgtacagaagacaactcattgaccaggtggttcagacggcactg
tcagagactcaggatccagaggaggtgtccgtgtcggtcaaggccttcatgaccgccgac
ctgccgaacgagctgatagagctgctggagaagattgttcttgataactccgtgttcagt
gaacacaggaacctccagaacctgctgatcttgacggccatcaaagccgaccgcacccgt
gtgatggagtacatcaacagactggacaactacgacgctccagacatcgctaacatcgcc
atcagcaatgagctttttgaagaggcttttgctatttttaagaagtttgacgtaaacacc
tcagccatacaggtattgatagagcacataagcaacctggaccgtgcctatgagtttgca
gagcgctgtaatgaacctgcagtttggagccagttggccagagctcagctgcagagagac
ctggtcaaggaggccattgactcctacataaaagctgtcgacccgtcggcatacatggag
gtggtaaatgcagccagcaagaacaataattgggaagacctggtgaaattccttcagatg
gcgcggaagaaagcgagggagtcctacgtggagacggagctgatcttcgccttggccaag
acgggtcgtctggcagagctggaggagtttgtcagcgggcccaacaatgctcacatacag
caggtgggcgacagatgttacgaggagggaatgtacgacgcagcaaagctcttgtacaac
aacgtgtccaactttgcccgcctggcttccacactcgtccaccttggggagtaccaagct
gctgtggacagtgctaggaaagccaacagcaccagaacctggaaagaggtgtgtttcgcc
tgtgtggacggagaggagttccgattagcacaaatctgcggccttcacattgtgatccac
gctgacgagttggaggatctgatcagctactatcaggaccgtgggtattttgaggagctc
atcgctctgctggaggctgccctggggctggagcgggctcacatgggcatgttcaccgag
ctcgccatcctctactccaaattcaaacctcagaaaatgagggagcacctggagctgttc
tggtccagagtcaacatcccgaaggttctccgtgcggcggagcagtctcacttgtgggcg
gagctggtttttctttacgacaaatacgaggagtttgacaacgctgtcatcacgatgatg
tctcatcctacggacgcgtggaaagaagggctgttcaaggacatcattgctaaggttgcc
aacatagaattgtactacaaatctctttccttctacctggaatacaaacccctccttctg
aatgacctgctcactattctgtcgccgcgcttggatcacagccgagccgtctccttcttc
agcaaggtgaaccagctgaagttggtgaagccttacctgagatctgtgcagaatcacaac
aacaagtcagtcaacgaggctctcaacaatctcctgacagacgaagaagactatcagagc
ctaagagcgtccatcgatggctatgacaacttcgacaccatcggcctggctcagcgctta
gagaaacacgagctgattgagttcagacgaattgccgcctatttgtacaaaggcaacaac
cgctggaggcagagcgtagagctgtgtaagaaggacaaactctacaaggacgccatgctg
tacgctgctgagtctaaggacgcagagctggccgagactctactccagtggttcctggag
gagggcaggaaggagtgtttcactgcctgtctgttcgcctcctatgatctgctccaccct
gacgtggtgctggagctggcctggagacacaacatcatggactttgctatgccctacttt
atccaggtcatgagagagtacctcacaaaggtggacaaactggatgatgcggagagccaa
aggaaaactgatgacgaggggacagaaccacaaccaatggtgattggtcagcagctgatg
ttgactgcagccactactccagtggcaccacagccagcttactcaggctacggataccct
gctaactcaggaggataccctcctcaggccgccgctggtgctgctgctgctgctgcagct
gccgcccagcccagcctgcttatggctttaacatgtagaagcctgactgaccctcctgcc
tcacccactcctctcctttgccctctttcacatgccttagacctgaacttcactgaacca
agctgctctggatctcaacaacccacatag
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