Cynoglossus semilaevis (tongue sole): 103398018
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Entry
103398018 CDS
T04866
Name
(RefSeq) LOW QUALITY PROTEIN: DNA excision repair protein ERCC-6-like
KO
K20093
DNA excision repair protein ERCC-6-like [EC:5.6.2.-]
Organism
csem
Cynoglossus semilaevis (tongue sole)
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csem03036
]
103398018
Chromosome and associated proteins [BR:
csem03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
103398018
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
AAA_34
SWI2_SNF2
TPR_1
TPR_2
TPR_8
Cas9_PI
TPR_11
Motif
Other DBs
NCBI-GeneID:
103398018
NCBI-ProteinID:
XP_008334719
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All DBs
Position
Z:14583036..14588311
Genome browser
AA seq
1296 aa
AA seq
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MDVSQHEDQVTEISEKLEKSLSMDTGDKITYYHRLIQNGKDVAKNGDMHKAIEFFKRAHA
LHYSEKLERRIKKIEELIAENDSEEEDEEFVNVNDSGLMLFKELHNKLYDYQRDGVAFLY
SLYRDGRKGGILADDMGLGKTIQVISFLSGMYDNELIKHTMLVMPTSLITNWTKEFAKWT
PGMRVKEFHGSSKAERTRNLEKVQRRGGVIITTYTMLMNNWQQLSSYNGKEFTWDYMILD
EAHKIKSNTTKTAKSASAVPSKNRVLLTGTPVQNNLKEMWALFDFACQGTLLGTAKTFKT
EYENPITRAREKDATPGERALGSRMSENLMAIIHPYFLRRTKAEVQKNKMNSXXXXXXDD
DDSRVLNQPEHCGAVMPTLTRKNDLIIWTYLSPIQEDIYRQFISLDHIKELLLTTRSPLA
ELNILKKLCDHPRLLSARAIATLGLEESTSADAEADSHSIAGVPDETLISESGKLVFLFA
LIEQLKREGHRTLVFAHYRKVLDIIERILGNKGFKVLRLDGTILQIAERERRISLFQRDS
SYSVFLLTTQVGGVGITLTAASRVVIYDPSWNPATDAQAVDRAYRIGQKENVVIYRLITC
GTVEEKIYRRQVFKDSLIRQNTGDKKNPFRYFSKQELKELFTLQDTRSSSTQLQLQAMHS
MHRRTDPKLDEHIAHLYAMEMFGISDHDLMFSLDVNQDDGPENQEEHHYIAGRVQKAQDL
MKAESELQMQLAENMASSTEPAWLRQPLSNNYNNNREPSWSDRTRNLKSSLVSPQRDQGL
SGSLVEVDSHSPESWNKEGRQNLSNGVIDLTVDESTTEEKPVGNVSHDKVSEHSLASPVH
QQIKREENYLEDGTVSPQQVADESLIMFEPVDAAVPDVAGVSAIEQTDGSTVSDAAPPLA
DGNSPAYTTASDELQQNLTSHSDVSFKQTPPQNRRVSSLQASNLSFKADVSSRVSAGLES
FEGNFNLELEDSDMFSEADVRDPPETEAVEMELLSKLEIDGSFDVNKSLNERRHREAGAP
DLDDSRKSMDTSMLTNKRKRLAVIYDSDDEEEPNVNGGRCDGSFQVLGASTPKSTPAVST
PLMSRRSLAGNTSVASWRSLAHSIIEDVDNRSADNDEAKADDENGYSSEILSYKAEEEEG
VNSHSAPESEEPEGETLNTEGEEEEDEEEMLEEEEVLEEEEEMLEEEEDENLSDSDPASR
SEENTNLDESMSEPELASNESVDKCTARDEVCPMNGKNAVEVETYDLLVSKGKECVHQGR
KDDALNFFLKAIDIKPGDPEIQLLTIQLYRQLSQRS
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
atggatgtttcccaacatgaagaccaggttacggagatttccgagaagctggaaaagtct
ctgtccatggatacaggtgacaagatcacgtactaccacagattaatccagaacggaaaa
gacgttgccaaaaatggagacatgcacaaagcgattgagttcttcaaacgcgctcacgcg
ctgcactacagcgaaaagctcgaaagacggatcaagaaaattgaggaactcatcgccgag
aacgactccgaggaggaagacgaagagttcgtcaatgtcaacgacagcgggttgatgctt
ttcaaagagctgcacaacaagctctacgactaccagagggacggagtggcgttcctctac
agcctctacagagacggtcggaaaggcgggatcctggctgacgacatgggcttgggtaaa
accatccaggtcatatccttcctttctggcatgtacgacaacgagctcatcaaacacacg
atgctggtcatgcccacttcgctcatcacaaactggaccaaggagttcgccaagtggacc
ccagggatgagggtcaaggagtttcacggctccagcaaagcagagcggacaaggaacctg
gagaaggttcagcggcgaggcggcgtcatcattaccacttacacgatgctcatgaacaac
tggcagcagctgtcgtcgtacaacggcaaagagttcacgtgggactacatgatcctggac
gaagcacacaagatcaaatcaaacaccaccaaaacggccaaaagcgcctccgccgtaccg
tcaaagaacagggttctcctcacgggaactcccgttcagaacaacctgaaagaaatgtgg
gcactgtttgatttcgcttgccaaggcactctccttggcacggccaagaccttcaaaacg
gagtatgaaaacccgatcacccgggccagagagaaggatgccactccaggggagagggct
ctgggttcccggatgtcggagaacctcatggccataatccatccttatttcctccgaagg
acaaaagccgaagtgcaaaaaaacaaaatgaacagcnnnnnnnnnnnnnnnnnggacgac
gacgacagccgagtgctaaatcaacccgaacactgtggagctgtgatgcccacgctgact
agaaaaaacgacctgatcatctggacgtatttgagccccatccaagaggacatttacagg
cagttcatttccctggaccacatcaaggagctgctgttgaccactagatcacccctagcg
gaattaaacattttaaaaaagttgtgcgatcacccaagactgctctccgcgcgagccatt
gccacgctgggcctggaggagagtacgtctgccgacgcagaggccgactcccacagcatc
gccggtgtcccagatgaaactctgatttccgagtcgggaaaactggtgtttctgttcgct
ctgatcgaacagctgaaacgggaagggcaccgcaccctggttttcgctcattacaggaaa
gtgctggacatcatcgaacgcatcctgggcaacaaaggcttcaaagtgctgagattggat
ggcaccattttgcagattgcagagcgggagcggcgcatctctctgttccagagagacagt
agctactccgtgttcctcctcaccacccaggtgggcggtgttggcatcacgttgactgcc
gccagcagggtggtcatctatgatcctagctggaacccagccacagatgcacaggctgtc
gaccgggcgtatcgcattggccagaaggagaatgtggtcatctacagactcatcacctgc
ggcacagtggaggagaaaatctaccgacgacaggtcttcaaggactccctcatacgacaa
aacaccggcgacaagaaaaacccgtttcgttacttcagtaaacaagaactcaaagaactc
ttcaccttgcaggatacccggtcctcctccacccagcttcagcttcaagccatgcactcc
atgcaccgtcggacggaccccaaactcgatgagcacatcgcccacctgtacgccatggag
atgtttggcatctccgaccacgatctcatgttttccctggacgtgaaccaggacgacggc
ccggagaatcaggaggagcaccattacatcgctggaagggtgcagaaggcacaggacctg
atgaaggctgagtcggagctgcagatgcagctggcagagaacatggcctccagcacggag
ccagcgtggctcaggcaaccgttgagcaacaactacaacaacaacagagagccctcatgg
agtgacagaacaagaaatctcaagtcaagtctcgtgagtccgcaacgtgaccagggatta
agtgggtccctggttgaggtggattcccattcgcccgagtcctggaacaaagaaggccga
cagaacctgagcaatggggttattgatctgactgtcgatgaaagcactacagaggagaaa
cctgtcggaaacgtgagtcacgataaggtttccgagcacagcctggcatctcccgttcac
cagcagatcaaacgtgaagaaaactacttggaagacggtaccgtttctccccagcaggtg
gcggatgagtctttgatcatgtttgagcctgtcgatgccgcagtaccggatgtagccggt
gtgtcggcgatagaacaaacggacgggtctacggtgtccgatgctgcgcctcctttagcc
gacggaaacagcccggcgtacactacagcctctgacgaactacagcaaaacttaacgtcg
cactcagatgttagctttaaacaaacgcccccgcagaacagaagggtgtcctcgcttcag
gcatccaacttgagttttaaagcagacgtgtcatctcgagtcagcgccggtctggagtcc
ttcgaaggaaactttaacttggagctggaggacagcgacatgttctctgaagccgatgtt
cgggatcctccagagactgaggcggtggagatggaactcttgtccaagctggaaatcgac
gggagtttcgatgtaaataaatccctcaatgagcgccgacacagagaagccggcgcgccc
gacctggacgacagccgcaagtcgatggatacgtcaatgttgaccaacaagaggaaacga
ctggcagtgatttacgatagcgacgacgaggaggaaccaaatgtcaatgggggacggtgt
gatggttccttccaggtcctcggggcctccacacctaagtcgacacccgcggtctccacc
ccgctgatgtccagacgaagtttggcgggaaacacctctgtagcctcatggcggtcactg
gcacactccatcatcgaagacgtggacaaccggagtgcggacaacgacgaggccaaggcc
gacgacgaaaacggttacagctcggagatactgtcgtacaaagctgaagaggaagaaggc
gtaaattcacactctgctcccgagtcagaggaaccggagggagagactctgaacacagag
ggggaagaagaagaggacgaagaagagatgttggaggaagaagaggtgcttgaagaagaa
gaagagatgttggaggaagaagaagatgaaaacctgtccgactccgatccagctagcagg
tctgaagagaacacgaacctcgatgaatccatgagtgaaccggagctcgcgtccaacgag
agcgtagacaagtgcacagccagagatgaggtgtgtccgatgaacgggaagaacgcggtc
gaagtggaaacctatgacttgctcgtctccaaagggaaggagtgcgtccaccaagggagg
aaggacgacgccttgaactttttcctgaaagccattgacattaaacctggcgatcccgaa
attcagctcctgaccatccagttgtaccgacagctgagccagaggagttag
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