Cynoglossus semilaevis (tongue sole): 103398077
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Entry
103398077 CDS
T04866
Symbol
trmt2a
Name
(RefSeq) tRNA (uracil-5-)-methyltransferase homolog A
KO
K15332
tRNA (uracil-5-)-methyltransferase [EC:2.1.1.-]
Organism
csem
Cynoglossus semilaevis (tongue sole)
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csem03016
]
103398077 (trmt2a)
Transfer RNA biogenesis [BR:
csem03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
103398077 (trmt2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
RRM_1
PCMT
Methyltransf_11
Methyltransf_4
MTS
Methyltransf_15
Ubie_methyltran
Cons_hypoth95
PrmA
RRM_PARP14_3
Methyltransf_32
Methyltransf_23
TRM5-TYW2_MTfase
N6_N4_Mtase
Methyltransf_12
RrnaAD
CMAS
RRM_occluded
Methyltransf_18
UPF0020
AviRa
Motif
Other DBs
NCBI-GeneID:
103398077
NCBI-ProteinID:
XP_008334790
UniProt:
A0A3P8VUN2
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Position
Z:complement(15291856..15296888)
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AA seq
618 aa
AA seq
DB search
MADGGDKPLVETLPPKVPPKEGGGPDEPVRVCDNDGVMSDDRAEGTAEAASDSGAYGYIK
EDLFTSEIYKVEIRNLPKFIGFNDLKKFLAKHGLSSHKVKLFDKHKFAFVTFKNEEERDK
AMKMVHGMQWKGQVLSVRLAKPKADPILGRRRNKGEDRGSGGQPPCKRAEGEPDEEPLSV
QIANVVTPLWGVPYEEQLRRKENEVRGVLQRLAKEIGSTNKILLPWLFAQKGKYNNMCCP
LEAIQPSPTQTAYRNKCEFLISMGADGRDKTIGFRLGKYKGGSCAVVGPADTCHVSDQAK
NVVGSFQTFIRTTPYSVYSPETYEGHWKQLTVRSTRSGETMAMVFFNPQKLEEEELDDLK
RSMREFFTDGEGQSCGLTSLYFIREGQRTSPNPEDLPCELVAGETCIHEELLGLKFRISP
HSFFQVNTAAAEVLYSVVGEWAQLDQDSTVLDVCCGTGTIGISLAKRVKKVIGIEMCQEA
VADAKVNAKLNGLSNVEFHCGRAEDVFPNVLGAVVSPNVTAIVDPPRAGLHSKVILAIRR
AEHLKRLVYVSCNAKAAMNNFVDLCRAPSNRVQGAPFRPVRAISVDLFPQTIHVEMLLLL
EREGYSTPTSSDREKIDS
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggcagacggtggtgacaaacctctggttgagacccttcctcccaaggttcctcccaag
gaggggggcggtcccgacgagcccgtccgggtgtgcgacaacgacggcgtgatgtccgat
gacagagccgaagggacggccgaggctgcgtccgactcgggcgcgtacggctacatcaaa
gaagacctgttcacgtcggagatttacaaagtggagatcaggaacctgcccaagttcatc
ggcttcaacgacctgaagaagttcctggccaagcacggcctcagctcacacaaggtcaaa
ctgtttgacaagcacaagttcgcatttgtcaccttcaagaacgaggaggagcgcgacaag
gcgatgaagatggtgcacggcatgcagtggaagggccaggtcctgagcgtccggttggcc
aaacctaaggcagaccccatcctggggaggaggaggaataagggggaggacagaggctcg
ggggggcagccgccctgcaagcgggcagaaggagaaccggacgaggagccgctcagcgtc
cagattgccaacgtggtgactcctctgtggggagtgccttacgaggagcagctgaggagg
aaggagaacgaagtcaggggcgttcttcagaggttggccaaggagatcggcagcaccaac
aaaatcctgctgccgtggctgtttgcacagaaggggaagtacaataatatgtgctgcccc
ctggaggccattcaaccatcgcccacacagacggcctacaggaacaagtgcgagttcctc
atctcaatgggagcagacggtcgcgacaagaccatcggttttcgtctggggaagtacaaa
ggaggctcatgcgcggtagtgggcccggccgacacgtgtcatgtgtccgaccaggccaag
aacgtagtcggcagcttccagacgttcatcagaaccacgccgtactctgtgtacagtcct
gagacgtacgagggtcactggaagcagctgacggtacgcagcaccaggagcggtgagacc
atggccatggtcttcttcaacccacagaaactggaagaagaagaactggacgacctgaag
agatccatgcgggagttcttcacggacggcgagggacagagctgcgggctgacttcttta
tacttcatcagagaaggtcaaaggacctcacctaatcctgaagacctgccctgtgagctg
gtcgccggggagacctgcatccacgaggaactgctgggcctgaagttccggatttctcct
cattctttcttccaggtgaacaccgcagctgcggaggtgctgtactccgtggtgggggag
tgggcccagctggaccaggacagcaccgtgttggacgtgtgctgtgggacggggaccatc
ggcatctccctggctaagagggtgaagaaggtgatcgggatcgaaatgtgtcaggaagca
gtggcggacgctaaggttaatgccaagctcaacggtctcagtaacgtcgagttccactgc
ggcagagcggaggacgtgttccccaacgttctcggcgcggtggtgtcgcccaatgtcacg
gcgatcgtggacccgccgcgggcaggtctacactctaaggtgatcctggcgatcaggagg
gcggagcacctgaagaggctggtttacgtgtcgtgtaacgccaaggcagccatgaacaac
ttcgtagacctttgcagagctccttccaaccgggttcagggcgcccccttcagaccagtg
cgagccatctctgtggatctgttcccccagaccatccacgttgagatgctccttctactg
gagagagagggatacagcaccccgaccagcagcgatcgggaaaagatagatagctag
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