KEGG   Cynoglossus semilaevis (tongue sole): 103398290
Entry
103398290         CDS       T04866                                 
Symbol
thbs4
Name
(RefSeq) thrombospondin-4
  KO
K04659  thrombospondin 2/3/4/5
Organism
csem  Cynoglossus semilaevis (tongue sole)
Pathway
csem04145  Phagosome
csem04510  Focal adhesion
csem04512  ECM-receptor interaction
csem04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:csem00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    103398290 (thbs4)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    103398290 (thbs4)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    103398290 (thbs4)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    103398290 (thbs4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:csem04131]
    103398290 (thbs4)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:csem04147]
    103398290 (thbs4)
   00536 Glycosaminoglycan binding proteins [BR:csem00536]
    103398290 (thbs4)
Membrane trafficking [BR:csem04131]
 Endocytosis
  Phagocytosis
   Opsonins
    103398290 (thbs4)
Exosome [BR:csem04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   103398290 (thbs4)
  Exosomal proteins of colorectal cancer cells
   103398290 (thbs4)
  Exosomal proteins of bladder cancer cells
   103398290 (thbs4)
Glycosaminoglycan binding proteins [BR:csem00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   103398290 (thbs4)
SSDB
Motif
Pfam: TSP_C TSP_3 EGF_CA EGF_3 COMP DUF7630 cEGF
Other DBs
NCBI-GeneID: 103398290
NCBI-ProteinID: XP_016898725
LinkDB
Position
Z:complement(20020510..20032758)
AA seq 956 aa
MMGLWVRTAALSLLLLQQLVLTVTAEGTVYDLLESPDCLPELLQGQLKTNGENEIFLLSS
FKLRNKTPASLFSIINPKDNTKYLDLSVMNKPNKISVRYQRSDGRFATISFNHPTLANGQ
EHHVMLHASGLQRGPPRLNIYIECTLAHTVEDFPTALGLLPSGSNKVGLRTLKSNGQDEL
TDLKLVTGDTIDNVATLQDCSVGQGQSLQLLDIQRADLLQNQVTMQELKNMIAEMKEILN
QQIKDTTLLRNTIVECLPCGKDPEHTPGQDPGQDPKKGQEPVSPSEQFVMHAQPQTECLP
GTCFRQDMCIRTESGDLHCAPCPDGYTGDGVRCDDVNECQFKPCYTGVRCVNTAPGFYCE
KCPLGFTGPLINGVGVSYAKSHKQVCKDIDECQDPPENGSCTANSHCYNTMGSFYCGECK
TGFTGDQVKGCHGTKLCPNGKISPCHISANCVIERDGSIGCLCGVGWTGNGYFCGKDTDI
DGYPDEHLHCRDSSCRKDNCLYVPNSGQEDADRDGIGDSCDEDADNDGISNENDNCWLVP
NFDQKNSDKDLHGDACDNCKTIDNPLQKDVDKDGVGDECDEDMDGDGIANIHDNCKKVFN
PDQNDRDYDRVGDVCDSCPDKSDPNQFDSDNDLIGDSCDDNTDSDGDGHQDSKDNCPSVI
NSAQLDTDKDGVGDECDEDDDGDGAADDDDNCRLVINPDQVDSDDNGVGDACEGDFDMDN
IIDKIDHCPENAEVTLTDFRAYQTVVLDPHGDSQIDPNWVVLNQGMEIVQTMNSDPGLAV
GYVAFNGVDFEGTFHVNTVIDDDYAGFIFGYQDSSSFYVVMWKQTEQTYWQSAPFRAVGS
PGIQLKMVKSQTGPGEYLRNSLWHTGDIPGQVRLLWKDPKNIGWKDKVSYRWFLQHRPQV
GYIRARFFEGSDLVADTGVIIDTSMRGGRLGVFCFSQENIIWSDLKYRCNGECLHI
NT seq 2871 nt   +upstreamnt  +downstreamnt
atgatgggtctgtgggtcagaactgcagctctgtctctgctgttgcttcaacagctggtt
ctcacagtcacagctgaagggactgtgtatgacctgctggagtctccagactgcctgcca
gaactccttcagggacagctgaagaccaatggggaaaatgagattttccttctctcttcc
ttcaagctccgtaacaagactccagcatctttgttcagtatcatcaaccccaaagacaat
accaagtacctggaccttagtgtgatgaacaaaccaaacaaaatcagtgtccgttaccaa
agaagtgatggcagatttgccaccatctctttcaaccaccccaccctggccaatggtcaa
gaacaccatgtgatgctacatgcgagtgggctgcaacggggtccacctcgactgaacatc
tatattgagtgcacactggcacacactgtggaggattttcctactgcgttagggttgctg
ccgagcggctccaacaaggtggggctaaggaccctgaagtcaaatggacaggacgagctg
acggacctcaagctggtgactggggacactatagacaatgtggcaactctccaggactgc
agcgtgggtcagggtcaatctctgcaactgctggatatccagagagcagatctgttgcag
aaccaggtcaccatgcaggagttgaagaacatgattgctgagatgaaggagatattgaac
cagcagattaaagacacaactttactgaggaacaccatcgttgagtgcctgccctgtgga
aaggatccagaacatactccaggacaagatccaggacaagatccaaaaaaaggtcaagag
ccagtttccccttcagaacagtttgtcatgcatgctcagcctcaaaccgagtgtctccca
ggaacctgcttcagacaggacatgtgcatccgtacagagtcaggggatctccactgtgcc
ccctgtcctgatggctatacaggagatggagttcgctgtgatgatgtcaatgagtgccag
tttaaaccgtgttacactggtgtccgctgtgtgaacactgcccctggtttctactgtgag
aaatgtcctctgggattcacgggacctctgattaatggagtgggcgtgtcctatgccaag
tcacacaaacaggtgtgtaaggatatagatgagtgtcaggatccacctgagaacggaagt
tgtacggccaactcccactgctacaacaccatgggttccttctactgcggtgagtgtaaa
actggcttcacaggtgaccaggtgaaaggctgtcatggtactaaactttgccccaacggt
aaaatcagtccctgtcacatcagcgctaactgtgtcattgagcgagacggcagcattggc
tgtttgtgtggcgttggttggacgggaaatggttatttctgtgggaaggacacagatatc
gatggatatccagacgaacatctccactgcagagacagcagctgtagaaaggacaactgt
ctgtatgtaccaaactctggacaggaggacgcagacagagatggtataggtgactcctgt
gatgaggatgctgacaatgacggcatcagtaatgagaatgataactgctggctcgtccct
aactttgaccagaagaacagtgataaggacctgcacggtgatgcatgtgacaactgcaaa
acaatagacaatcccttacagaaagatgtagataaggacggagtaggagatgaatgtgat
gaagacatggacggggacggcattgcgaacattcatgacaactgcaagaaagttttcaac
cctgatcagaacgacagggattatgacagagtgggagacgtctgtgacagctgtcctgat
aagtccgatccaaaccagtttgactcggacaatgatctcataggtgacagctgtgacgac
aacacagacagtgatggtgatggccaccaggactctaaggacaactgtccctcagttata
aactctgctcagctggacacagataaggatggagtgggagatgaatgtgacgaagatgat
gatggtgatggagcagcggacgatgatgacaactgcagactcgtcattaacccagaccag
gtggactctgatgacaacggtgtgggagacgcctgtgaaggagactttgacatggataat
atcatcgataaaattgaccactgtccagagaacgctgaggtcaccctgaccgacttcaga
gcctatcagaccgtggtgctggacccacatggagattctcagattgaccccaactgggtc
gtcctcaaccagggaatggaaatagtacagaccatgaactctgaccctggccttgctgtt
ggttatgtagcttttaacggggtggatttcgaaggaactttccacgtgaacacggtgata
gacgacgactatgccggcttcatctttggatatcaggactcctcctccttctatgtggtg
atgtggaaacagacagaacagacctactggcagtctgcacccttcagagctgtgggttct
ccagggatacagctgaagatggtgaaatctcagacaggacctggtgagtatctaaggaac
tccctctggcacacaggagacatcccaggacaggtacgcctcctgtggaaagaccccaag
aacattggctggaaggacaaggtttcataccgttggttcctccagcacaggcctcaggtt
ggatacatcagagctcgctttttcgaaggttcagacctggtggcagacacaggggtgatt
attgacactagtatgagaggaggccgcctgggcgtgttctgcttctcccaggagaatatc
atctggtccgacttgaaataccgttgcaacggtgagtgtctacacatttga

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