Cynoglossus semilaevis (tongue sole): 103398290
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Entry
103398290 CDS
T04866
Symbol
thbs4
Name
(RefSeq) thrombospondin-4
KO
K04659
thrombospondin 2/3/4/5
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem04145
Phagosome
csem04510
Focal adhesion
csem04512
ECM-receptor interaction
csem04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103398290 (thbs4)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
103398290 (thbs4)
09144 Cellular community - eukaryotes
04510 Focal adhesion
103398290 (thbs4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
103398290 (thbs4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csem04131
]
103398290 (thbs4)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csem04147
]
103398290 (thbs4)
00536 Glycosaminoglycan binding proteins [BR:
csem00536
]
103398290 (thbs4)
Membrane trafficking [BR:
csem04131
]
Endocytosis
Phagocytosis
Opsonins
103398290 (thbs4)
Exosome [BR:
csem04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
103398290 (thbs4)
Exosomal proteins of colorectal cancer cells
103398290 (thbs4)
Exosomal proteins of bladder cancer cells
103398290 (thbs4)
Glycosaminoglycan binding proteins [BR:
csem00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103398290 (thbs4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
EGF_CA
EGF_3
COMP
DUF7630
cEGF
Motif
Other DBs
NCBI-GeneID:
103398290
NCBI-ProteinID:
XP_016898725
LinkDB
All DBs
Position
Z:complement(20020510..20032758)
Genome browser
AA seq
956 aa
AA seq
DB search
MMGLWVRTAALSLLLLQQLVLTVTAEGTVYDLLESPDCLPELLQGQLKTNGENEIFLLSS
FKLRNKTPASLFSIINPKDNTKYLDLSVMNKPNKISVRYQRSDGRFATISFNHPTLANGQ
EHHVMLHASGLQRGPPRLNIYIECTLAHTVEDFPTALGLLPSGSNKVGLRTLKSNGQDEL
TDLKLVTGDTIDNVATLQDCSVGQGQSLQLLDIQRADLLQNQVTMQELKNMIAEMKEILN
QQIKDTTLLRNTIVECLPCGKDPEHTPGQDPGQDPKKGQEPVSPSEQFVMHAQPQTECLP
GTCFRQDMCIRTESGDLHCAPCPDGYTGDGVRCDDVNECQFKPCYTGVRCVNTAPGFYCE
KCPLGFTGPLINGVGVSYAKSHKQVCKDIDECQDPPENGSCTANSHCYNTMGSFYCGECK
TGFTGDQVKGCHGTKLCPNGKISPCHISANCVIERDGSIGCLCGVGWTGNGYFCGKDTDI
DGYPDEHLHCRDSSCRKDNCLYVPNSGQEDADRDGIGDSCDEDADNDGISNENDNCWLVP
NFDQKNSDKDLHGDACDNCKTIDNPLQKDVDKDGVGDECDEDMDGDGIANIHDNCKKVFN
PDQNDRDYDRVGDVCDSCPDKSDPNQFDSDNDLIGDSCDDNTDSDGDGHQDSKDNCPSVI
NSAQLDTDKDGVGDECDEDDDGDGAADDDDNCRLVINPDQVDSDDNGVGDACEGDFDMDN
IIDKIDHCPENAEVTLTDFRAYQTVVLDPHGDSQIDPNWVVLNQGMEIVQTMNSDPGLAV
GYVAFNGVDFEGTFHVNTVIDDDYAGFIFGYQDSSSFYVVMWKQTEQTYWQSAPFRAVGS
PGIQLKMVKSQTGPGEYLRNSLWHTGDIPGQVRLLWKDPKNIGWKDKVSYRWFLQHRPQV
GYIRARFFEGSDLVADTGVIIDTSMRGGRLGVFCFSQENIIWSDLKYRCNGECLHI
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgatgggtctgtgggtcagaactgcagctctgtctctgctgttgcttcaacagctggtt
ctcacagtcacagctgaagggactgtgtatgacctgctggagtctccagactgcctgcca
gaactccttcagggacagctgaagaccaatggggaaaatgagattttccttctctcttcc
ttcaagctccgtaacaagactccagcatctttgttcagtatcatcaaccccaaagacaat
accaagtacctggaccttagtgtgatgaacaaaccaaacaaaatcagtgtccgttaccaa
agaagtgatggcagatttgccaccatctctttcaaccaccccaccctggccaatggtcaa
gaacaccatgtgatgctacatgcgagtgggctgcaacggggtccacctcgactgaacatc
tatattgagtgcacactggcacacactgtggaggattttcctactgcgttagggttgctg
ccgagcggctccaacaaggtggggctaaggaccctgaagtcaaatggacaggacgagctg
acggacctcaagctggtgactggggacactatagacaatgtggcaactctccaggactgc
agcgtgggtcagggtcaatctctgcaactgctggatatccagagagcagatctgttgcag
aaccaggtcaccatgcaggagttgaagaacatgattgctgagatgaaggagatattgaac
cagcagattaaagacacaactttactgaggaacaccatcgttgagtgcctgccctgtgga
aaggatccagaacatactccaggacaagatccaggacaagatccaaaaaaaggtcaagag
ccagtttccccttcagaacagtttgtcatgcatgctcagcctcaaaccgagtgtctccca
ggaacctgcttcagacaggacatgtgcatccgtacagagtcaggggatctccactgtgcc
ccctgtcctgatggctatacaggagatggagttcgctgtgatgatgtcaatgagtgccag
tttaaaccgtgttacactggtgtccgctgtgtgaacactgcccctggtttctactgtgag
aaatgtcctctgggattcacgggacctctgattaatggagtgggcgtgtcctatgccaag
tcacacaaacaggtgtgtaaggatatagatgagtgtcaggatccacctgagaacggaagt
tgtacggccaactcccactgctacaacaccatgggttccttctactgcggtgagtgtaaa
actggcttcacaggtgaccaggtgaaaggctgtcatggtactaaactttgccccaacggt
aaaatcagtccctgtcacatcagcgctaactgtgtcattgagcgagacggcagcattggc
tgtttgtgtggcgttggttggacgggaaatggttatttctgtgggaaggacacagatatc
gatggatatccagacgaacatctccactgcagagacagcagctgtagaaaggacaactgt
ctgtatgtaccaaactctggacaggaggacgcagacagagatggtataggtgactcctgt
gatgaggatgctgacaatgacggcatcagtaatgagaatgataactgctggctcgtccct
aactttgaccagaagaacagtgataaggacctgcacggtgatgcatgtgacaactgcaaa
acaatagacaatcccttacagaaagatgtagataaggacggagtaggagatgaatgtgat
gaagacatggacggggacggcattgcgaacattcatgacaactgcaagaaagttttcaac
cctgatcagaacgacagggattatgacagagtgggagacgtctgtgacagctgtcctgat
aagtccgatccaaaccagtttgactcggacaatgatctcataggtgacagctgtgacgac
aacacagacagtgatggtgatggccaccaggactctaaggacaactgtccctcagttata
aactctgctcagctggacacagataaggatggagtgggagatgaatgtgacgaagatgat
gatggtgatggagcagcggacgatgatgacaactgcagactcgtcattaacccagaccag
gtggactctgatgacaacggtgtgggagacgcctgtgaaggagactttgacatggataat
atcatcgataaaattgaccactgtccagagaacgctgaggtcaccctgaccgacttcaga
gcctatcagaccgtggtgctggacccacatggagattctcagattgaccccaactgggtc
gtcctcaaccagggaatggaaatagtacagaccatgaactctgaccctggccttgctgtt
ggttatgtagcttttaacggggtggatttcgaaggaactttccacgtgaacacggtgata
gacgacgactatgccggcttcatctttggatatcaggactcctcctccttctatgtggtg
atgtggaaacagacagaacagacctactggcagtctgcacccttcagagctgtgggttct
ccagggatacagctgaagatggtgaaatctcagacaggacctggtgagtatctaaggaac
tccctctggcacacaggagacatcccaggacaggtacgcctcctgtggaaagaccccaag
aacattggctggaaggacaaggtttcataccgttggttcctccagcacaggcctcaggtt
ggatacatcagagctcgctttttcgaaggttcagacctggtggcagacacaggggtgatt
attgacactagtatgagaggaggccgcctgggcgtgttctgcttctcccaggagaatatc
atctggtccgacttgaaataccgttgcaacggtgagtgtctacacatttga
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