Cynoglossus semilaevis (tongue sole): 103398305
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Entry
103398305 CDS
T04866
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1A-like
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
csem
Cynoglossus semilaevis (tongue sole)
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csem03036
]
103398305
Chromosome and associated proteins [BR:
csem03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
103398305
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
CUE
ERCC3_RAD25_C
HHH_3
HHH_5
TTC3_9th
Motif
Other DBs
NCBI-GeneID:
103398305
NCBI-ProteinID:
XP_008335105
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All DBs
Position
Z:complement(20725184..20741354)
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AA seq
1070 aa
AA seq
DB search
MSVFNLDRFRFDKNVTTAANKEQGHGSKSPESEKENKPEKMKSNKAPPKNRGVVFEDVLS
VDSEDEDPSPPKIKIAPKKRFVNPKLKLSIHTILDDGDNEMDNKINQLLEMFPRLTRTQV
LKVIKSTSTLDGAVAACLLEYGDKEEPNKKRKVDECCNSQDGGEDHPRKKRKLLLLRSRT
STEQSINSSPFIGKFSEEEEGDDDDCYDDNEEKEPSWEKQEAMVRRLQRKFPDQDKEELR
MVLQEHNWDDEEALQVLQMFSDPVSSSFPDSKEVTSNKLKHKDKSNRTHKKRHKHVEEVL
TISETSQNLDSANDSEATKQSENESDVEVTSKASTLSTWLQKESKPVSSSSSVKKEYNST
SEKKKSSSAAPQMLSRFASGTSLAKKQAAEIKRKARAMKEHVSSEGESDGGEDTASSEFD
ESDNELDSNSAMTGIKEKVLEFFMDASLDELSQISGCSAKKASRIIEMRPFKKWQTLVEI
LQKENGLSEHLLVGCKHFLKERKVVLGLMSKCETISSKMVKQVTTVMESGTGANKQPSLL
NSQLQLKPYQLIGLKWLLLLHEHKLSGILADEMGLGKTIQAISFLAQLYENGIEGPHLIT
VPSSTLDNWVRELKLWCPRLSVLVYYGSVEDRRYLRHDILSGMTDVNVIVTTYNLAIGND
NDRSLFRKMRLKYAVFDEGHMLKNMSTLRYRHLMSINAEHRLLLTGTPLQNNLLELMSLL
NFIMPSMFSSSTTQLTKMFSMRSQVESRFERDRISQAKLIMKPFILRRVKCEVLKQLPAK
EEKVEYCSMSEKQQVLYDKLLKKLKSSTTGENRELCNVMMQLRKMANHPLLHRQYYNTEK
LKAMSKLMLKEPSHYDADAALIQEDMEVMSDFELHGLCKQYSSINSYQLEKDILLDSGKF
HYLTELLASLKEKGDRVVLFSQFTMMLDIVEVLLKQLKHRYVRLDGSTPIADRIVLIDEF
NTDPDIFVFLLSTRAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQSRTVKVFK
LISKDSIEDGILQLGQKKLKLEKDMTAADKDGETTITEDMAYLLKASLGL
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgttcaatttagaccggtttcgtttcgacaaaaatgtgacgacggcagcaaac
aaagaacagggccacggttccaaaagtccggagtcagagaaggagaacaaaccagaaaaa
atgaaatccaacaaggccccaccaaagaacagaggagtggtctttgaggatgtactttct
gttgactcagaggacgaagatccatcaccacctaagatcaaaattgctccaaaaaaaaga
tttgtaaatccaaaactgaagctatccattcacacaatattagacgatggagacaatgaa
atggacaataaaataaaccagcttctggagatgtttccaaggttgacaaggactcaggtt
ctgaaggttattaaaagcacaagcacattagatggagctgttgctgcctgtcttttggag
tatggtgataaagaagaaccaaacaagaagagaaaggtggatgaatgttgtaactcacag
gatggtggtgaagatcatcctaggaaaaagaggaaactgttattgttaagatcacgtaca
tcaacagagcagtcgattaactcttcacctttcattggtaagttctcggaggaagaagaa
ggagatgatgatgattgttatgatgacaatgaagaaaaagagccaagttgggagaagcag
gaggccatggtgaggaggctacaaagaaagtttcctgatcaggacaaggaggagttgcgt
atggtgctgcaagaacacaactgggacgatgaagaggctctgcaggtgctgcagatgttc
tctgacccagttagtagcagtttccctgactcaaaagaagtaacttccaacaaattaaag
cacaaagacaagtcaaacaggacacacaaaaaaaggcacaagcatgttgaagaggtccta
accatcagtgaaacatctcaaaatctggacagtgccaacgattcagaagctacaaaacaa
agtgaaaatgaatcagatgttgaagtcacatctaaagcttcaacactgtccacgtggctt
caaaaagaatcaaaacctgtgtcttcatcctcatctgtcaagaaagaatataattctacc
tcggaaaaaaaaaaatcctcttctgctgctccccagatgttatcaaggtttgctagtggc
actagtttagctaagaaacaagcagcagaaattaagagaaaggcacgtgccatgaaagaa
catgtcagctctgagggggaaagtgatggaggggaggacactgcgagcagtgagtttgat
gagtcagacaatgaactggattctaacagtgccatgactggcattaaggagaaggtgcta
gagtttttcatggacgcatcgctggatgagctgtcgcagatctctggctgttctgccaag
aaagccagcagaatcatagagatgagacccttcaaaaagtggcaaacactggtggaaatc
cttcagaaagagaatggactctctgagcatttacttgttggctgcaaacatttcctcaaa
gagcgaaaagtagtcctagggcttatgtccaaatgtgagactatttcctccaaaatggtc
aagcaggtgaccacagtgatggagagtggcacaggagccaacaaacagcccagtttactc
aacagccagctccagttgaaaccttatcagctgattgggctgaagtggctgctgctgctg
cacgagcataaactgagtggaatcctggctgatgaaatgggtttgggtaaaacaatccaa
gctatatcctttttggcccagttgtatgagaatggaatagagggacctcatctcatcact
gtgccatcatctacactggataactgggtcagagagctgaagttatggtgtccaagactt
agtgttttagtatactatggatcagtagaagaccgccgctacctcagacacgatatcctc
agtggaatgaccgacgtcaatgtcatagtcaccacgtataacttagctataggaaatgac
aacgatcgcagccttttcagaaagatgagactgaagtatgctgtgtttgatgagggccac
atgctgaaaaacatgagtaccctacgctaccgccacctaatgtccataaacgcggagcat
cgcttgctgctaacaggaactccattacagaacaacctcttagagctcatgtctctcttg
aacttcatcatgccctcaatgttctccagctccactacacagctcacaaaaatgttttct
atgagatctcaggtggagagccgttttgagagagatcgaatatctcaggccaaacttatc
atgaagccctttatactcagaagagtcaagtgtgaggtcttaaagcagctaccagctaaa
gaagagaaagtggagtactgttcaatgagtgagaaacagcaggtgctgtacgacaagctc
ttaaaaaaactcaagtcgtccaccactggcgagaatcgtgagttgtgtaatgtgatgatg
cagcttagaaagatggccaaccacccactacttcacagacagtactacaatacagagaag
ctgaaagccatgagcaaactcatgctgaaggaaccaagtcactacgatgcagatgctgct
ctcatccaggaagacatggaggtgatgtcagactttgagcttcatggcctgtgcaaacag
tacagctccatcaactcctatcaactggaaaaggacatcctgctggactctgggaaattc
cactacctcacagagctgctggcctctctcaaagaaaagggggacagagtggtgctcttc
agtcagttcaccatgatgctggacattgtggaagtgctgctgaaacaactcaagcatcgt
tacgtcaggttggatggatccacacccatagctgacaggattgtgttgatagatgaattc
aacacagaccctgacatatttgtgttcctgttgtctacacgggctggaggccttggcatc
aatcttacctcagctaatgttgtcattctacatgacattgactgcaatccctataatgac
aaacaggctgaggataggtgtcaccgtgtcggccagtccagaactgtcaaggtattcaaa
ttgatcagtaaggacagcatagaggatggcatactgcagctgggacagaagaagctgaag
ctggaaaaggacatgacggccgcagataaagatggggaaacaaccataacagaagatatg
gcttatttgctcaaagcctcactgggactgtga
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