KEGG   Cynoglossus semilaevis (tongue sole): 103398436
Entry
103398436         CDS       T04866                                 
Symbol
neo1
Name
(RefSeq) neogenin isoform X1
  KO
K06766  neogenin
Organism
csem  Cynoglossus semilaevis (tongue sole)
Pathway
csem04350  TGF-beta signaling pathway
csem04514  Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:csem00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04350 TGF-beta signaling pathway
    103398436 (neo1)
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    103398436 (neo1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:csem04515]
    103398436 (neo1)
Cell adhesion molecules [BR:csem04515]
 Immunoglobulin superfamily
  DCC/UNC5 family
   103398436 (neo1)
SSDB
Motif
Pfam: Neogenin_C fn3 I-set Ig_3 Ig_2 ig Pur_ac_phosph_N Ig_DSCAM-DSCAML_C V-set Tissue_fac C2-set_2 fn3_2 C1-set TMEM154 EphA2_TM DUF4834 CD34_antigen
Other DBs
NCBI-GeneID: 103398436
NCBI-ProteinID: XP_008335273
LinkDB
Position
Unknown
AA seq 1504 aa
MAERGALSLLSLLCLTILYTASTAAKHADKGSTVQPFAAFWFTVEPQDTLAVRGNMAMLN
CSVHSDAATPVHIEWKKDGTFLSLVSDDRRHILPDGTLVFSHVVHAKHNKPDEGTYQCVA
TIENLGSISSRTARLTVAGSPKFSSQPVASSVRPGDSQVMACEVNSNLVPFTRWEKDHQP
LEMSGRLVQLQSGALVISNATEADAGLYRCVVENVGASKSSDEAQLQIVPETGDDRKLEF
LVPPVPVTKVVGTNVLLPCVVTGYPTAQIHWMFGDKPLEESEGRVEVMGGGVLQITNLSQ
KDAGVYTCVAENPNGTIEAQAQLTVQVPPQFVKEPLHLYAHESMDIIFECEVSGSPAPTV
KWVKNGDAVIPSDYFKIVKDHNLQVLGLVKSDEGFYQCLAENDAGNIQSNAQLIILDHDV
ALPLFPPPPLTPNTTDHVTPGSGGVAAPAGPTPSAPRDVVASLVSTRFIKLTWRQPAEPH
GDELTYSVFYSLEGTSRERVVNTSRPGEMQVTIQNLMPETKYRFRVVAHNGYGQGESSAV
LKVATQGEVQVPGPASNLQAVSNSPTSVSLSWDIPLTGNGEILSYKLYYTDKSFDSEQDV
DVDGQSYAMTGLKKNTEYSFRVVANNKHGPGVSTEDVVVRTLSDVPSAAPQNLTVEVQNS
KSIMLRWQPPPPNAQNGEITGYKIRYRKGSRRSEAADTTGGRELSKLIDGLERGMEYSFR
VSAMTVNGSGPATDWMTAETFESDLDESRVPDQPSSLHVRPLVNSIVVSWTPPENQDIVV
RGYTIGYGIGSPHAQTIKVDYKQRYYTIENLDPSSHYVITLKAYNNVGEGIPVYESAITR
PQSDPIEPDVDLYDLFHAPYTPVPDPSPMMPPVGVQAFVLSYDTIKVTWADNSLPKNQKI
TDNRFYTVRWKTNIPANTKVKSANATNLNYMVTGLKPNTLYEFSVMVTKGRRSSTWSMTA
QGTTFETIPSSSPKDVTVVSKENKPRTIIVNWQPPSEANGKITGYIIYYSTDVNAEVHDW
VIEPVVGNRLTHQIQDLTLDTTYHFKIQARNSKGMGPMSEAVNFRTPKTESSDKMANDQA
SKSSINQQPPEPGTSVGKSGVGSTSENHILVIIIIISVGAFTIIVVVVGAFLCTRRTTSH
QKKKRAASKSSNGSHKYKGNSKDLKPPDLWIHHERLELKPIDKSPEPNPVMTETPIPRSS
QDITPADSGLESNPHLQQRRNSYLGHESEDSMSTLAGRRGMRPKMMMPFDAQPPQPVISA
HPIHSLDNHHHHYHMGSLASPTRSYLYHQGSGHQRPHVCATPISHLERVDSTESVRNTPC
SEPLPPATASSQVSCPSEYLADPEGSYHGSSTTEEESGYSSNLPPIRSAHPHAHAHPLKS
FAVPAYPGTGHPTYESSALPSTPLLAQTVPPTHPHVVKTASIGTLGRTRSPMIVNVPNAP
DVPETSKMLEDVDNVLASLPPCPSPASRSNPVPLPQSYEPDELTEEMAHLEGLMKDLNAI
TTAP
NT seq 4515 nt   +upstreamnt  +downstreamnt
atggccgagcggggagctctgtcgctcctctctcttctctgtctcaccatcctctacacg
gcgtccacagcggcaaagcatgccgataaaggttcaactgtgcagccattcgctgccttc
tggttcacagtggagccacaggatacgctggctgtccggggcaacatggcgatgctcaac
tgctcggtccacagcgacgcagccacgcctgttcacatcgagtggaaaaaggacggcacc
ttcctgagcctggtttcagacgacaggcgacacatacttcctgatggcaccctggtcttc
agccatgtggtccacgccaaacacaataagcctgatgaaggcacctatcagtgtgtggcc
accatcgagaacctcggatccatctcaagccgcacagctcgcctcactgtagctggttcc
cccaagttctccagccagcctgtagcaagctccgtacgtccaggagacagtcaggtgatg
gcgtgtgaggtcaactccaaccttgttcccttcactcggtgggagaaggaccaccagcca
ctggagatgagcggacggttggttcagctgcagagcggagccctggtgatcagtaacgcc
acagaagccgacgcagggctctaccgatgtgtggtggaaaacgtgggggcgtccaagtcc
agcgacgaggcccagcttcaaatagtgccagaaactggagacgacaggaagttggagttc
ttggtgccacctgttccagtgaccaaagttgtgggcaccaacgtcctgctgccctgtgtg
gtcaccggatatcctacagctcaaatccactggatgtttggagacaaaccgctagaagag
agtgagggtcgtgtggaggtgatgggaggaggcgttctgcagatcaccaatctctcacag
aaggatgctggagtctacacctgcgtagcagagaaccccaacggaactatcgaagcccag
gcccagctcacagttcaagttcctccacagttcgtcaaggagccattacatctttatgcc
cacgagtccatggacatcatctttgaatgtgaggtttcagggtcgcctgctcccaccgtc
aagtgggtcaagaacggagatgctgtcatccccagtgactactttaaaatagtgaaggat
cacaacctgcaggttctgggtctcgtcaagtcagatgagggtttttaccagtgtcttgcg
gaaaatgacgcaggcaacatccagtccaacgcccaactcatcatcttagatcacgatgta
gccctgccccttttccctccccctccactgactcctaacactactgaccatgtaacacca
ggctccggaggtgtagctgctcctgcagggcccactccgtcagcaccacgagacgtcgtg
gcttcgctggtttccactcgcttcatcaagttgacctggcgccaaccagccgaaccacat
ggagacgagctaacctactcggttttctatagcctggaaggcaccagcagggagcgagtg
gtgaacaccagccgtccaggagagatgcaggtcaccatccagaacctcatgcctgagact
aaatatcggttcagggttgtggcacacaacggctacggccagggagagagttctgcagtt
ctcaaagtggccacccagggtgaagtccaagtccccggccctgcttctaatcttcaggca
gtgtcaaacagtccgacctctgtctctctgagctgggacatacctctcacaggcaacgga
gaaatcctcagctacaagttgtactacacggacaaaagcttcgacagcgaacaggacgtg
gatgtcgacggtcagtcgtacgccatgacaggactgaagaaaaatacggagtacagtttt
cgtgtggtggccaacaacaagcacggaccaggggtctccactgaggatgtggtggtccgc
accctgtctgatgtgcccagcgctgctcctcaaaacctgactgtggaagttcagaactca
aagagcatcatgctccgctggcagccccctcctccaaacgcccagaacggtgagatcaca
ggctacaagattcgataccggaaaggatcacgcaggagtgaggcagccgacaccaccgga
ggcagagagcttagcaagctcattgacggtctagagcgtggtatggagtactccttcagg
gtgtcagccatgacggtgaacggcagcggaccagccacagactggatgacagcagagaca
tttgagagtgacctggacgaatcccgtgtaccagaccagcccagctctctgcacgtccgc
ccattggtcaacagtattgtggtgagctggacgccaccggagaaccaggatatcgtggtg
cgcggttacaccatcggctacggcatcggcagcccccacgctcaaaccattaaagtggat
tataagcagcggtactacaccatcgagaacctggaccccagctctcactacgtgatcaca
ctgaaggcctacaacaacgtgggtgaggggattcctgtgtatgagagcgccatcacaagg
ccacagtcagaccccattgaacccgatgttgacctgtatgacctcttccatgctccatac
accccagtaccagacccctcccccatgatgccgcccgtgggtgttcaggcctttgtgttg
agctacgacaccatcaaggtgacctgggctgacaactcgttacccaaaaatcaaaaaatt
accgacaatcgtttctacacagtgagatggaagaccaacatccctgccaacaccaaagtg
aagtcggccaacgctaccaatctgaattacatggtgacaggtctgaagcccaatacattg
tacgagttctcagtcatggtgaccaaaggtcgacgcagcagcacttggagcatgactgca
cagggcaccacgtttgaaaccattcccagctcttctccaaaagatgtgacggtggtgagc
aaagagaacaaaccccgcaccatcatcgtgaactggcagccgccttcagaggccaacgga
aagatcactggctatatcatctactacagcactgatgtcaatgctgaggtccatgactgg
gtcatagaaccagtggttggaaaccgcctgacccatcagatccaggacctgacactggac
actacctaccactttaagatccaagctcggaactctaagggcatgggccccatgtctgag
gccgtcaacttccgcactcctaaaactgagtcctctgacaaaatggctaatgaccaagcc
tcaaaatcttccatcaaccagcagccaccagagcctgggacttcagttggtaaatcaggt
gtgggaagcaccagtgaaaatcacatcctggttatcatcatcatcatctcggtgggagcc
ttcaccatcatcgttgtggtggtgggagccttcctgtgcacgcggagaacgacatcgcac
cagaaaaaaaaacgagcggcctcaaagtcctcaaacggctcccacaaatacaagggaaat
tccaaagacctgaaaccccctgatctctggattcaccatgagaggctggagctcaaaccc
atcgacaaatctccagagcccaacccggtcatgacagaaactcccataccacgtagctct
caggacatcacgccagctgacagcggcctagagagtaaccctcacttgcagcagaggcgc
aactcctaccttggccacgaatcagaggacagcatgtctacactagcaggtcgacgaggg
atgagacctaaaatgatgatgccttttgatgcacagccgcctcagcctgtgattagcgct
caccctatccattcccttgataaccatcaccaccattatcacatgggcagcctggcatcg
ccaacacgaagctacctctaccatcagggcagtgggcaccagcgcccgcatgtgtgcgcc
acccccatctcccatttagagagggtggactctacagagtcagtgaggaacaccccatgt
tcagagccgctccctccagccacagcttcttcccaggtctcctgcccctcggagtatctt
gcagatcctgagggaagttaccacggctccagcactacggaggaggagtctggctactcc
agtaacctgcctcccatccgctcagcacatcctcacgctcatgctcacccactcaaaagt
tttgcagtgcctgcatacccaggaactgggcatccaacatatgagtcgtctgctttaccc
agcacgccgctcctggctcagactgtgcctcccactcaccctcatgttgtaaaaacagcc
tccattggaacgctgggcagaacacggtcaccgatgatagtcaacgtgcccaacgcccct
gatgtgcccgagaccagcaagatgctggaagatgtggacaacgtgcttgcctccctcccc
ccctgcccttctcctgcctctcgcagtaaccctgttcctctccctcagagctatgagccc
gacgagctgactgaggagatggcccacctcgagggccttatgaaggacctgaatgctatc
accacagcgccatga

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