Cynoglossus semilaevis (tongue sole): 103398523
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Entry
103398523 CDS
T04866
Symbol
rfc4
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem03030
DNA replication
csem03410
Base excision repair
csem03420
Nucleotide excision repair
csem03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
103398523 (rfc4)
03410 Base excision repair
103398523 (rfc4)
03420 Nucleotide excision repair
103398523 (rfc4)
03430 Mismatch repair
103398523 (rfc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csem03032
]
103398523 (rfc4)
03036 Chromosome and associated proteins [BR:
csem03036
]
103398523 (rfc4)
03400 DNA repair and recombination proteins [BR:
csem03400
]
103398523 (rfc4)
DNA replication proteins [BR:
csem03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
103398523 (rfc4)
DNA Replication Termination Factors
ELG1-RFC complex
103398523 (rfc4)
Chromosome and associated proteins [BR:
csem03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
103398523 (rfc4)
DNA repair and recombination proteins [BR:
csem03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
103398523 (rfc4)
Check point factors
HRAD17(Rad24)-RFC complex
103398523 (rfc4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
AAA_lid_RFC1
RCF1-5-like_lid
DNA_pol3_delta2
Rad17
AAA_assoc_2
AAA_16
AAA_22
AAA_11
AAA_30
DUF815
Mg_chelatase
Cdc6_lid
AAA_14
AAA_19
Gp44_lid
RuvB_N
SLFN-g3_helicase
AAA_24
Kinesin
DNAX_ATPase_lid
AAA_5
ResIII
AAA_7
AAA_28
Motif
Other DBs
NCBI-GeneID:
103398523
NCBI-ProteinID:
XP_008335395
UniProt:
A0A3P8UE23
LinkDB
All DBs
Position
2:10595443..10599251
Genome browser
AA seq
358 aa
AA seq
DB search
MQAFLKGSAVQSVRAQKDKTSSSSSAGAERKTRAVPWVEKYRPKCVDEVAFQEEVVAVLK
KSLDGADLPNLLFYGPPGTGKTSTILAAARELYGPQLFRQRVLELNASDERGIQVVREKV
KNFAQLTVAGSRPDGKPCPPFKIIILDEADSMTAPAQAALRRTMEKESRTTRFCLICNYI
SRIIEPLTSRCSKFRFKPLANQIQEERLLSICEKEELKYSRESISALVQVSEGDLRKAIT
LLQSAARLSMDREITETSVIEIAGVVPPKTIDKLLQVCFRGTFEKLEVVIRELVDDGYAA
TQILTQLHDAIVEGHLSDKQKSAITEKMAVVGKCLLDGADEYLQLLSLCSLIMHQSNN
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcgtttttgaaaggatctgcggttcagtctgtcagagctcagaaagataaaacc
tcgtcgtcttcatcagcaggagctgagaggaaaaccagagctgtgccctgggtagagaag
tacagaccaaagtgtgtggatgaagtggcctttcaggaggaggtggtggcagttctgaag
aagtctctggatggagcagatctccctaacctcctgttctatggacctcctgggacagga
aagacctccaccattctggcagctgccagagaactttatggtcctcagctcttcagacag
agggtgctggaactcaacgcttcggatgaacgaggtatccaagtggtcagagagaaggtg
aagaactttgctcagctgacagtggcaggaagtcgaccagatgggaagccctgtcctccg
ttcaagatcatcatcctggatgaagcagactccatgacagctccagctcaggctgctctc
aggagaaccatggagaaggagtctcgcaccacacgcttctgcctcatctgtaactacatc
agcaggatcatcgaaccactgacatccagatgttctaaatttcgcttcaagcctttggcc
aatcagattcaagaggagaggctgctgtcaatctgtgagaaggaggagctaaagtacagc
agagagagtatctcagctttggtgcaggtgtcggagggcgacctgcggaaggccattacc
ctgctccagagtgccgcccgcctcagtatggacagagagatcacagagactagtgtcatt
gaaatcgctggggtggttcctccaaaaaccatcgacaagttgctgcaggtctgcttcaga
ggaacatttgagaaactggaggtggtgatcagagagctagtggatgacggctacgctgca
actcagatcctgactcagctccacgatgccattgttgaaggccatctgagtgacaagcag
aagtcggccatcactgagaagatggcggtggtggggaagtgtctgttggatggagcggac
gaatacctccagttgttaagtttgtgttcgctcatcatgcaccagtccaacaactga
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integrated database retrieval system