Cynoglossus semilaevis (tongue sole): 103399114
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Entry
103399114 CDS
T04866
Symbol
nwd1
Name
(RefSeq) NACHT domain- and WD repeat-containing protein 1
KO
K24734
NACHT domain- and WD repeat-containing protein
Organism
csem
Cynoglossus semilaevis (tongue sole)
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
csem04990
]
103399114 (nwd1)
Domain-containing proteins not elsewhere classified [BR:
csem04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
103399114 (nwd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
WD40
WDR55
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
NACHT
WD40_MABP1-WDR62_2nd
Beta-prop_EML
NPHP3_N
DUF4062
WD40_MABP1-WDR62_1st
AAA_16
Beta-prop_TEP1_C
AAA_22
NBCH_WD40
Y_phosphatase
Beta-prop_Nup120_160
APAF1_C
WD40_like
Viral_helicase1
PEP5_VPS11_N
Beta-prop_SCAP
TniB
AAA_35
Beta-prop_IFT122_1st
NB-ARC
NPHP3
Bac_DnaA
SRP54
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
103399114
NCBI-ProteinID:
XP_008336080
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All DBs
Position
2:complement(11542514..11551469)
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AA seq
1632 aa
AA seq
DB search
MAEHQDPGLQDLLRGQSEEEQGMKTCSNMIRVFISSTFTDMSSERKVLLEKAYPEVLSFC
RSLGLVFEVVDLRWGIRNVTSGDHDSCEVFLKEMENCCRISAGPAFVALLGNRYGHRALP
RFIPEKEFEVLSSKLTKNPEGIKMLNQWFLKDNNAVPPTYVLQPITAHFSHYSDLRPESR
PQHDKDVVSWRLTETKLLQLLRSAATTAEKDGDITAEQKQRFFSSVTEREFEQGLWEDDS
RRLPLIFVREIQRQRVREGPKRLAKYMDMTFDGLLDAEAQGLLTELKSRLYTSSKNILNL
HCVELIKGSVDPKRKEHAQYLESICEQFVSQMKARITAVADPQYEGREKGKRIWGNTEKP
FQTSEWVEEEVRQHVARSTELCKGLHGREGVLGKLCLTMWESNNIHHGPLVVHGAAGMGK
TTLLCKLAHEMQKVLEAKSSVVIRLLSAHHPQRPDINQVLHSICLQVCLSCGLSPPSPLT
AGAHLELRRFFRTMLSQVSQQGYTLLLILDSLDQLSDQNHAHRLHWLPVDLPPNVHIVVS
MDTSSEVFANIRLKVESLDRFFVVERLSGDDGKKIMDTNMRSWQRTLTPEQSHTVLQKFE
STGCPLHLKLILSAAKHWTSFTPLTELNLGENLKDTFLKLLLKLEEKHGKELVGGALGYL
ALAREGLLEAELRDILSLDDNVISEVYKYFLPPTPSLIRLPPFLWARLRRDLEDLLEERW
TSGVVFITFNNRHVAEMVSSHYLTPERRGQSHRILADYFLGRWSGKLKPASLPGLSLLLS
DRKVPPQPLWFAPGMANVRKLQEMPYHLLHADLWEELQQQVIGNADWLHCKSRVCGVSAV
IQDLDQCSQFMNCTETRLIRDTLVLIKPTFDFLENQIDMNVFCAELLARLSSLAQKCPAV
IGQLCSQCEEWLLTCPEPILLPKCSFMQQPGGALQHTLSGLYGGVVCLDVSVQLQVLVAG
SDDGVVAVWSLVDQQLVHTLLGHKEAVLHVQVIDSLSCCLSLAADGCLMRWSLINGQQLL
CVQEAVPVDSTPSAVCLHLLDQNQLICVYTRTQVKLWKLDGAQLFSQTNEEDSVTLGVLD
DSVFSLTQSGLVRIWSLLKRTPTVETELRTSKRLSTVVNSALAPKRGKVIVVTKMGFLYQ
ISRQGKVSAVDFPLVPSFLCVTEDEKILMAACDQTLGLYNLDTDSLDNFLNLTHDDTVLS
ACLSSDGRQLFTGAADQLIRIWSVTTGALLDSLCGSQSPVSSLLLYKGSVVSASAAAPVI
QLWNLKYDPDYKPIDHIPVGCAHVAVTRDCDQIFFVRHQSETEVISWNNHTGCISERLSV
SAEVSCLEIAQNKRLLFCGLTSGTVLIYPLNIPQETLCIPPPESLCSVLSLAVSSKERHV
AVAYEDAVCLFEITTRECFPTVEGPMQRVSLSLLQSPLSSMALLPDRRLLYGTSCGEVTL
YDFRGGSSSALEPHHSRITCITASNWGKHALVGSEDAVQRLWSLSPVALDHTMEYKGFFF
EGVLCAAFADSDQFVFTGSKDRTVKVWDVANGNLLLVQYVYSPVVRMLTYRNGFVALSQQ
GCVIREVFRCPEHISPDYNPLRNIKAQYRVTSRKRGEEDQCTPELQNYNPAQFNLNLMSM
LGEKPSATCLIL
NT seq
4899 nt
NT seq
+upstream
nt +downstream
nt
atggcagagcatcaagaccccggtctgcaggacctcctcagaggacagagtgaagaagaa
caggggatgaagacctgctccaacatgatccgtgtcttcatcagctccacgttcacagat
atgagcagtgagaggaaggtcctgttggagaaggcttatccagaagtcctgtccttctgt
cgcagtctgggcctcgtgtttgaggtggtggacctgcgatgggggattagaaacgttacg
tctggagatcatgattcctgtgaagtcttcctgaaggagatggaaaactgttgcagaatt
tcagctggtccagcctttgtcgcactgctggggaatcggtatggtcaccgcgctcttcct
cggtttatcccagagaaagagtttgaagttctctcgtccaaactcaccaaaaaccctgaa
ggcatcaaaatgctgaaccagtggtttctaaaagacaacaatgctgtcccgcccacctac
gtccttcagccaatcacagctcacttctcccactacagtgacctccgacctgagagtagg
ccccagcatgacaaggatgtcgtgtcctggcgtctcacagagactaaactgttacaactc
ctacgatcggccgccaccacagctgagaaagatggtgacatcacggcggagcagaagcag
cgtttcttttcatcagtcacagagagggagtttgagcagggattatgggaagacgacagc
agaaggttaccacttatcttcgtccgagagattcagagacaaagggtgcgggaaggaccc
aaacgtctggcaaagtacatggacatgacgtttgacggcctgctggatgcagaagctcag
ggtctcctcactgaactcaagtcaagactctacacctcgtcaaagaacatcctgaacctg
cactgtgtggagctcatcaaaggcagcgtcgaccccaaacgcaaagagcacgcacagtac
ctggagagcatttgcgagcagtttgtgtcccagatgaaggcccggatcacagctgtggct
gatcctcagtatgaggggagggagaaggggaagagaatctgggggaacactgaaaaaccc
tttcaaacgtcagagtgggtggaggaagaggtgaggcagcatgttgctaggagtactgag
ctctgtaagggtctccatggacgagagggtgttctgggtaaactctgcctcaccatgtgg
gagtcaaacaacatccatcatggtccactagtggtccacggtgctgctgggatggggaag
accaccctgctgtgtaagctcgctcatgaaatgcagaaggtcctggaggccaaatccagt
gtggtgatcagactgctttctgctcatcatcctcagagaccagatataaaccaggtcctc
cacagcatctgtctccaggtctgtctgagctgcggcctgtctccaccttctccgctgacg
gctggtgctcacctggagctgcgcaggttcttcagaaccatgctctcccaggtgtctcaa
cagggctacaccctgctcctaatcctagactccttagaccagctgtcggaccagaaccat
gctcacagacttcactggttgcctgtggatctcccacctaatgtccacatagtagtttcc
atggataccagcagtgaagtctttgccaatatccgcctaaaggtggagagtttggacagg
ttcttcgtggtggaacgtttatctggcgatgatggtaagaagattatggacaccaacatg
agatcatggcaacggactctgacaccagagcagagccacactgtgctgcagaagtttgag
tccactggctgccctctccacctcaaactgatcctctctgctgccaaacactggacctcc
ttcacacccctcacagaactgaacctgggcgagaacctgaaggatacattcttgaagctt
cttctgaaactggaggagaaacatggaaaggagctggttggtggggccttgggatacctg
gcactggcaagggagggcttactggaggcagagctgcgtgacattctgtccctggacgac
aacgtcattagtgaagtatacaagtacttccttcctcctacaccctcgttgatcagactg
cctcctttcctgtgggccagacttagacgggaccttgaagacctgcttgaggagcgttgg
acatctggagttgtcttcatcacatttaacaaccgacatgttgcagagatggtttcgtct
cactacctgacaccagaacgccgggggcagagccacaggatcctggctgattacttcctg
ggacgatggtcaggaaaactgaagcctgcgtctctacccggtctgtccctgctgctctca
gacaggaaggttccaccacagcctctgtggtttgcccctggaatggctaatgtcagaaag
ctccaggaaatgccctatcacctgctgcacgctgacctgtgggaggagcttcagcagcag
gtcattggaaacgctgactggctgcactgtaagagcagggtctgtggagtctcagctgtg
atccaggacctggaccagtgttcccagttcatgaactgcaccgagaccagactgatccga
gataccctggtcctcatcaaacccacctttgacttcttggagaatcaaatagacatgaac
gtcttttgcgcggagctgttggctcgtctctcctccctggctcagaaatgccctgctgtg
attggtcagctgtgcagccagtgtgaggagtggctcctgacttgccctgaacccatcctg
ctgccaaagtgcagtttcatgcagcagccaggcggggcactgcagcacacactaagtgga
ctttatggaggtgtcgtctgtttggatgtcagtgtgcagctgcaggtcctggtggcaggt
tcagatgatggagtggtggcggtgtggagtctggttgaccagcagttggttcacaccctg
ctgggacacaaagaggctgtcctgcacgtccaggtgattgacagcttgtcttgctgtctc
tcattggctgctgatggatgtctgatgaggtggagcctcatcaatggtcaacagctgctc
tgtgtccaggaggcagtgcctgttgactccaccccctcagcagtgtgcctccatctgttg
gatcagaatcagctgatctgtgtttacaccaggactcaggtaaagctgtggaagttggat
ggagcccagctcttcagccagaccaacgaagaagattcagttactttaggagttttggat
gattcagtattttctctgacccagtctggtcttgtcagaatctggagtcttttaaaaagg
actccgaccgtggagactgagctgagaacctctaagagattgtcaacagtcgtcaactct
gctctggcaccaaaacgagggaaagtgattgtagtcactaaaatggggtttttgtaccag
atttcgagacaaggcaaagtctcagctgttgactttcctctggttccttcttttctttgt
gtaactgaagacgagaagatcctgatggctgcttgtgaccagactctgggtctctacaac
ctggacacagactctctggacaattttctcaacctgacacacgacgacaccgttctttcc
gcctgtttatcctcagatggacggcagctgttcacaggagctgcagatcaactcatacga
atctggtctgtgaccaccggggctctgttggactctctctgtggatcacagtctcctgta
tcctcacttctgttgtacaaaggttctgtggtttcagcctcagcagctgctcctgtcatc
caactgtggaacctgaaatatgacccagattacaaacccatcgaccacatacctgtgggc
tgtgcccacgtcgccgtcaccagagactgtgatcaaattttctttgtacgacatcagagt
gagacagaagtcattagctggaacaaccacacaggttgtatttccgagcgtttgtctgtc
tcggctgaggtcagctgtctggagatagcccaaaacaaacgtcttcttttctgtggcctg
acctctggcaccgtcctcatctaccctctgaacataccccaggagaccctgtgcatcccc
ccaccagagagtctctgcagcgtcctgagtctggccgtcagctccaaggagagacacgtg
gccgtggcctacgaggatgcggtgtgtctgtttgagatcaccaccagagaatgtttcccc
acagtggaggggcctatgcagagggtgtccctgtccctgcttcaatccccactctcctcc
atggctctgctgcccgaccgcaggctgctgtacggcaccagctgtggggaggtcaccctc
tatgacttcaggggcggcagcagctcagcattagagcctcatcacagcagaatcacctgc
atcacagccagtaactgggggaaacatgcactggtggggtcggaggacgctgtccagaga
ctgtggtccctgagcccagtggctctggaccacaccatggagtacaagggtttcttcttc
gagggagtcctctgtgctgcctttgctgacagtgaccagttcgtcttcactggatctaag
gacaggactgtcaaagtgtgggacgtggccaatgggaacctcctgttggtccagtacgtc
tactctcctgtggtcaggatgctgacctacaggaacggctttgtggccttgtcccagcag
ggctgcgtcatcagagaagtgttccgctgcccagaacacatcagcccagactacaaccct
ctgaggaacatcaaggcccagtacagggtcacctccaggaagaggggggaggaggatcag
tgcacacctgagctgcagaactacaacccagcccagttcaacctgaacctcatgagcatg
ttaggagaaaagccctcagcgacctgcctcatcctgtag
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