Cynoglossus semilaevis (tongue sole): 103399951
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Entry
103399951 CDS
T04866
Symbol
lsm2
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem03018
RNA degradation
csem03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103399951 (lsm2)
09123 Folding, sorting and degradation
03018 RNA degradation
103399951 (lsm2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csem03019
]
103399951 (lsm2)
03041 Spliceosome [BR:
csem03041
]
103399951 (lsm2)
Messenger RNA biogenesis [BR:
csem03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103399951 (lsm2)
mRNA degradation factors
5'-3' decay
Lsm complex
103399951 (lsm2)
Spliceosome [BR:
csem03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
103399951 (lsm2)
Complex C
U2 snRNP components
103399951 (lsm2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
DYW_deaminase
Motif
Other DBs
NCBI-GeneID:
103399951
NCBI-ProteinID:
XP_008336829
UniProt:
A0A3P8UQ36
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Position
2:complement(15196250..15199172)
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AA seq
95 aa
AA seq
DB search
MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPEKYPHMLSVKNC
FIRGSVVRYVQLPADEVDTQLLQDAARKEAMQQKQ
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgcttttctactcgtttttcaaatcactagtcggcaaggacgtggtggtggagctcaaa
aatgacctcagtatctgtggaacacttcactctgttgaccagtacctaaacatcaagctg
acagacatcagtgtcacagacccagagaaatatccgcacatgctgtctgtgaaaaactgc
ttcatccgtggatcagtggtgcggtacgttcagctccccgcagatgaagtggacacacaa
ctacttcaggatgctgcacgtaaagaagcaatgcagcagaaacagtga
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