Cynoglossus semilaevis (tongue sole): 103399982
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Entry
103399982 CDS
T04866
Symbol
sned1
Name
(RefSeq) sushi, nidogen and EGF-like domain-containing protein 1
KO
K24470
insulin-responsive sequence DNA-binding protein 1
Organism
csem
Cynoglossus semilaevis (tongue sole)
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
csem04990
]
103399982 (sned1)
Domain-containing proteins not elsewhere classified [BR:
csem04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
103399982 (sned1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
NIDO
hEGF
EGF_TEN
fn3
EGF_2
EGF_3
EGF_CA
SdrD_B
EGF_Teneurin
EGF_MSP1_1
EGF_DL_JAG
YoaL
DUF1635
Motif
Other DBs
NCBI-GeneID:
103399982
NCBI-ProteinID:
XP_008336877
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All DBs
Position
2:complement(15391730..15418231)
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AA seq
1329 aa
AA seq
DB search
MVLVLRALLTCLCTLLSLDLPPGVHPAVSLKDFYPFGQDKGDSQTNAQDDGGSGLVDISV
AFPFFGDRHAGLYVNNNGLVSFLREVSQFTPVAFPIAGDRRVVAPFWADVDNRRAGKVFY
RESREPSLLSRASADVRMYFSEFPSFNATWVLISTWHKVTFFGGNALTPVNSFQVVLITD
GELSFTVFQYNNITWTTGMHASSGGNQAGLGGIAAQAGFNAGDGKRYFNIPGSRTADVAN
VEGTTNVGYPGKWVFRIDNAQVEVGGCNDSASVCPHLRPCLNGGQCIDDCITGNPSFTCS
CLAGFSGRRCQINIDECASHPCQNGGSCTDLINSFSCECPPGYTGSLCETENDVCKDRPC
SNNASCVQSGVTFTCVCEPGYTGVLCETDLNNCRSNPCLNGGECISSAANFTCVCPPPFT
GILCETELMELHSNSTDTKNQTDLCEDGNCTRNQICEFTDSGTYNCTCAPGFYGDQCEGT
THLLTPTVLNNWFELHLNLFPPEVTQTPCSHSKLCPDGGPCLEYGGTYLCTCQTAEMEIG
HKDFYPNVQPRSVCDSSPCLNGGDCYEQDEGYTCECKHGYWGKHCEKVRHNTCASSPCRN
GGSCKEEAGSYRCVCPYRFTGKHCEVGKPDPCASGPCLNGGTCFHYIGKYKCECTDDYRG
RHCEINWSAVQTPTVLSCGLPPQVKHAEIQFSSTTPGSVAVYVCHSGYMSVPRATQSICG
IQGDWSQPPLCEEVNECLSQPCLNDGTCHNQVGSYKCVCNEGFTGNRCQTYNNKCLSEPC
KHGGTCEDQPGSYLCHCAPGFKGQNCDIEQDTCDLNPCLNGGVCRGYRRHYVCICKAGFF
GDQCQMLEDPCVLQPCGNRGVCRTDRRGNYNCVCKTGYTGKDCEKDLMPPSGLHVLRVEE
TEVELRWDEPEPSHSAISGFAVTYAPLQEGNPKTDYLDRHQSAHVMRGLAPGQLYNISTF
SVKRGNNKKDSSQPATALIRTRPRRVEELQVVNVTSSEVWLSWLVPMATVDRVHVSLLPS
DGSEAQTAVLNTSTTEYSFSSLFPGQMYTVDVLTQSGIRPDEFPSTSHSAGPLPFWTRPP
PPQNLSLSHVSTNSALVTWTWHQGNLPDGFVVNVTRGLNTRSRFLPNGKLGSYTFRELTP
GQQYYVTLTSVKNTGQEQIHSVPKHLSFTTLPMESRLLRRERPVGTGQGSRHTPRLSQPQ
DLGGTAETDNAEELPRYTELIDRRGKITPEPPLRLEKMEETTNKISLALEVQEEGSRTTP
EVLPDCRSLPCQNGGTCVNQTDAFICDCAAGFKGRQCELSCQRVPHPCTRIYSETKSVPV
WEGGVCHYL
NT seq
3990 nt
NT seq
+upstream
nt +downstream
nt
atggtgttggtgctgcgagccctgctgacctgcctctgcactttgctctccctggacctg
ccgcctggggtgcaccccgctgtgtccctgaaggacttctacccctttggtcaggacaaa
ggggactcccagaccaacgctcaggacgacggcggctcggggcttgtggacatttctgtt
gcttttcccttctttggagaccggcacgcaggactttatgttaacaacaacggccttgta
tctttcctgagggaagtgtctcagttcacacctgtagcttttccaatagccggggacaga
cgagtcgtagcgccgttctgggctgatgtggacaatcgccgggcggggaaagtgttctac
agagaaagccgcgagccttctctgctgagcagggcatcagccgatgtcaggatgtacttc
tcggaattccccagctttaatgcaacctgggttctcatctcaacatggcacaaggtcacc
ttctttggaggcaacgctctcacaccggtaaattctttccaagtggtgcttattacagac
ggcgagctttccttcactgtattccagtacaataatataacctggaccacaggcatgcac
gccagcagtggaggaaatcaggcaggactgggagggatcgcagcacaggcaggttttaat
gctggtgacggcaaacgctacttcaacattcctggctctcgcacagctgacgtggcgaac
gtggagggaaccaccaatgtcggctaccccggcaaatgggtgttccgcattgacaatgcg
caggtggaagtgggtggctgcaatgactctgcatcagtgtgtcctcacctgcggccctgc
ctgaacggaggccagtgcatcgacgactgcattacgggcaacccctccttcacttgctcg
tgtttggctggtttcagcggtcgaagatgtcagattaacatcgatgaatgtgcctcacat
ccttgccagaacggaggctcttgcacagacctgatcaacagcttctcctgcgagtgtcct
cccggatacacggggagtctgtgtgaaacagaaaacgatgtgtgcaaagaccgcccctgc
tccaacaatgcgtcctgcgtgcaaagcggcgtcaccttcacctgcgtgtgcgaaccgggc
tacaccggtgtcctgtgcgagacagatctaaacaactgcaggtcaaacccttgtctgaat
ggaggagaatgcatcagttcggcggccaactttacctgcgtttgccctcctcccttcact
ggaatcctctgtgagacagaactgatggagcttcacagtaattcaaccgatacaaaaaac
caaacagatttgtgtgaagacggaaattgtacccggaatcagatttgtgaattcaccgac
tcaggaacgtacaactgcacgtgtgctccgggcttctacggcgaccagtgtgaaggtact
acgcacctgctgacaccgactgtactgaacaattggtttgagctacatctcaacctcttt
cccccagaagtaacgcagacaccctgcagccacagtaagctgtgtcctgatggcggtcct
tgtttggagtacggcggaacctacctgtgtacatgtcaaacggctgaaatggaaatcggt
cataaggacttctaccccaatgtacagccccgatcagtctgcgactcttctccctgtctg
aatggaggcgactgttacgaacaggatgaaggctacacctgtgagtgcaagcacggatac
tgggggaagcactgcgagaaagttagacacaatacctgtgcttctagtccctgccgcaac
ggaggctcctgtaaagaggaggccgggagctacagatgcgtgtgtccgtataggtttact
gggaaacactgcgaagttggaaaacccgacccctgtgcttctggtccttgtctaaacgga
gggacgtgttttcactacataggaaaatacaaatgtgagtgcactgacgactacaggggc
agacactgtgaaatcaactggagcgcagtgcaaacacccacagtcctgagctgcgggcta
cccccgcaagtgaaacacgccgagatccagttctcgtcaacaacaccaggctcagtggcc
gtgtacgtatgccactcgggctacatgtccgtgcccagagccacccagagcatctgtgga
atccagggagactggagccagccacctctttgtgaggaggtcaatgagtgcctgtcgcag
ccttgcctcaacgacggcacatgtcataaccaggttggatcctacaagtgcgtttgcaat
gagggcttcactggaaatcgctgtcaaacatacaacaacaaatgcctctcagaaccctgt
aaacacggagggacgtgcgaagaccagccgggctcctacctgtgccactgtgcgccaggt
tttaaaggccaaaactgcgacatagagcaggatacatgtgatctcaacccctgtttgaac
ggaggagtgtgtcgtggctacagacgacactacgtttgcatctgcaaagctggctttttc
ggggaccagtgccagatgttggaagacccctgtgtactgcaaccctgtggcaaccgtgga
gtctgccggaccgacaggagaggaaactacaactgtgtttgcaaaacaggatacacgggc
aaagactgtgagaaagacctgatgcctccctctggtcttcatgttttgcgcgtggaggaa
actgaggtggagctccgctgggatgagccagagccgtcgcacagcgcgatcagcggcttc
gctgtcacgtacgctccgctgcaggaaggaaaccctaaaacagattaccttgacaggcat
cagtccgctcacgtgatgcggggcctggcgcccggccagctgtacaacatttccacattc
tccgtcaaacgcggcaataacaagaaggactccagtcagcctgccaccgcgctgatacga
accagaccccgcagggtggaggagctgcaagtggtcaacgtgacttcatctgaggtttgg
ttgagttggctggttcccatggcaacggtggaccgggtgcatgtgtccttactgccctcc
gatgggagcgaggcccagactgcagtgctcaacaccagcacaactgagtacagcttcagt
tcactatttcccggtcagatgtacacagtggatgtactgactcagagtggaatcagacct
gatgagtttccttccaccagtcactcagctggaccgctccccttctggaccaggcccccg
cccccacagaacctctccttgtcacatgtcagcactaactcagctctggtcacctggact
tggcaccaggggaacctcccagatggctttgtggtcaacgtgacgaggggcttaaacacc
aggagtcgcttcttgcctaacgggaagttgggatcatacaccttccgtgaactcactccg
gggcagcagtattatgtgaccctcacgtctgtgaaaaacacagggcaggagcagatccac
agcgtaccgaagcacttgtccttcactaccttaccaatggaaagcaggttgttgaggagg
gagagaccagtgggcactggacaggggagtcgacacactcctcgtctttcccagcctcag
gacctgggaggcacagcagaaacggacaacgcagaggaactgcccagatacacagagctc
attgacagaagagggaaaataacacctgagccgccacttcgattagaaaagatggaggaa
acaacgaacaaaataagcctcgctctagaggttcaagaagaaggttcaagaacaacgcct
gaggtgctcccggactgccgcagtctgccttgccagaacgggggtacgtgtgtgaaccaa
accgatgccttcatctgtgactgtgccgctgggttcaagggcagacagtgtgaactgtcc
tgccagcgagtgccacacccgtgtacgcggatctactcggaaacaaagagcgttccggtc
tgggagggaggagtgtgccactacctgtga
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