Cynoglossus semilaevis (tongue sole): 107989841
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Entry
107989841 CDS
T04866
Name
(RefSeq) E3 ubiquitin-protein ligase HERC2-like
KO
K10595
E3 ubiquitin-protein ligase HERC2 [EC:
2.3.2.26
]
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107989841
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csem04121
]
107989841
03036 Chromosome and associated proteins [BR:
csem03036
]
107989841
03400 DNA repair and recombination proteins [BR:
csem03400
]
107989841
Enzymes [BR:
csem01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
107989841
Ubiquitin system [BR:
csem04121
]
Ubiquitin ligases (E3)
HECT type E3
107989841
Chromosome and associated proteins [BR:
csem03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
107989841
DNA repair and recombination proteins [BR:
csem03400
]
Eukaryotic type
DSBR (double strand breaks repair)
Other DSBR factors
Ubiquitin ligases
107989841
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Motif
Other DBs
NCBI-GeneID:
107989841
NCBI-ProteinID:
XP_016895703
LinkDB
All DBs
Position
2:complement(136944..152802)
Genome browser
AA seq
1373 aa
AA seq
DB search
MAVTVKDLSVPSSEDAVTPSSAVTPSASGASSRPFIPVTDDPGAASIIAETMTKTKEDSE
SQSKVVGPEPQYLDEFTSLLVPDDTRVMVDLLKLGVACRAGDKGKEVLSLVLSGMGTAYP
QVADMLLELCVTELEDVATDSQSGRLSSQPVVVESSHPYTDDTSTSGTVKIPGAEGLRIE
FDRQCSTERRHDPLTVMDGANRIVSVRSGREWSDWSSELRIPGDELKWKFTSDGSVNGWG
WRFTVYPIMPAAGPKDLLSDRCILSCPSMDLVTCLLDFRLNFASNRSIIPRLAASLAACA
QLSALAAGHRMWALQRLRKLLTTEYGQSININRLLGDTDGESRSMSLTGSALAALVKGLP
EALQRQYEYEDPVVRGGKQLLHSPFFKVLVALACDLELDTLPCCAETHKWAWFRRYCTAS
RVSVALDKRSPLPRLFLEEVTKKVRELMADHESMNNLHESHELFRREQDEQLVQWMNRRP
DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVT
ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVY
SWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACVTASGELFTWGKGRYG
RLGHGDSEDQLKPKLVEALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGG
SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR
QVQGLQGKKVTAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGK
KINRVACGSAHTLSWSTSKPTNAGKLPTQVPMEYNHLQEIPIMALRNRLLLLHHISELFC
PCIPMFDLEGRLGQTGHGPSVGFDTLRGILISQGKEAAFRKVVQATMVRDRQHGPVVELN
RIQVKRSRSKGGLAGPDGTKSVFGQMCSKMASFSPDSLLLPHRVWKVKFVGESVDDCGGG
YSESIAEMCEELQNALTPLLIVTPNGRDESGANRDCFLLNPAVKSSLHFSMFRFLGVLLG
IAIRTGSPLSLNLAEPVWKQLAGMNLTIADLSEVDKDFIPGLMYIRDNEATAEEFEAMTL
PFTVPNASGQDIQLSAKYSHITLENRAEYVRLAMNYRLHEFDEQVSAVREGMARVVPVPL
LSLFTGYELETMVCGSPDIPLHLLKSVATYKGVEPMAPLIQWFWEVMESFSNTERSLFLR
FVWGRTRLPRTIADFRGRDFVVQVLDKYNPPDHFLPESYTCFFLLKLPRYSCRQVLEEKL
KYAIHFCKSIDTDDYARIALSGEPAADDSSEDSDNEDADSFASDSTQDYLTGH
NT seq
4122 nt
NT seq
+upstream
nt +downstream
nt
atggctgtcactgtgaaagacctgtctgttccttcctctgaagatgccgttactccctcc
tctgctgtgactccctcggcctctggtgcctcctcacgtcccttcattcccgtcactgat
gatcccggggcggccagcatcattgctgagaccatgaccaaaactaaagaggactcggag
agtcagagtaaagtggtcggtccagaaccccagtatctggacgagttcaccagcctcctg
gtccctgatgatacacgggtcatggtggacctcctcaaacttggcgtggcctgtcgagct
ggagacaaaggcaaagaagttctgtcattggttctgtccgggatgggaacagcatacccc
caggtggcagacatgctgctggagctgtgtgtgaccgagctggaagacgttgccacagat
tctcagagcggacgactgtcctctcagcctgtggtggtggagagcagccatccgtacacc
gacgacacctccaccagtggcactgtcaagatcccaggagccgagggtctgagaatcgag
tttgaccgacagtgttccaccgagagacgccacgatccactgaccgttatggacggagcc
aacaggatcgtctctgtcagatcaggtcgggaatggtccgactggtccagtgaactgaga
atacctggagatgagctgaagtggaagttcaccagtgatggttcggtcaacggttggggc
tggcgcttcaccgtctatcccatcatgcctgctgctggtcctaaagaccttctgtctgac
cgctgcatcctctcctgtccctccatggacctggtcacatgtctcctggacttcagactc
aactttgcctccaacaggagcatcattcctcgtctggctgcctcgctggctgcctgcgct
cagctcagtgcacttgctgcgggtcacagaatgtgggcgctgcaacgtctgaggaaactt
ctgaccacagagtatggtcagtccatcaacatcaaccgtctgctgggagataccgacggt
gaatctcgctccatgtcgctgacaggaagtgctctggctgctctggtcaaaggtctacct
gaagctctgcagcgtcagtatgaatatgaagatcctgtggtcagaggagggaaacagctt
ctccactctcctttcttcaaggttctggtggcgctggcctgtgacctggaactggacacg
ttaccctgctgcgctgagacccacaagtgggcgtggtttcgacggtactgcacggcttca
cgagtgtctgtggccctggacaagaggagtccgctgcccagactcttcctggaggaggtg
acgaaaaaagttcgtgagctgatggccgaccacgagagcatgaacaacctccacgagagc
cacgagctcttcagacgagagcaggacgagcagctggtgcagtggatgaaccgacggccc
gacgactggacgctctcagcggggggcagcggaaccatctacggctggggccacaaccac
aggggccagctgggagggatcgagggcgccaaggtcaaagtgcccactcccaccgaggcg
ctggccacactcaggccggtgcagctgattggaggagagcagacgctgtttgccgtcact
gcagacgggaagctctacgccacgggctacggagcaggaggtcgactgggaatcggtggc
acagagtcggtgtccacgcccacgttactggagtccattcaacacgtgttcatcaggaag
gtggcggtgaattctggagggaaacactgtctggctctgtcgtccgagggcgaggtttat
tcctggggagaagctgaagacggaaaactgggccacggaaacagaagcccttgtgaccgc
ccccgagtcattgagtctttgaggggggtggaggtggtggacattgcagcagggggcgct
cacagcgcctgcgtcacagccagtggagaactgttcacctgggggaaaggacgttacggt
cgactgggacatggagacagtgaagaccagctcaaacctaaactggtggaggcgctgcag
ggccacagagtcatcgacgtggcctgtggcagtggagacgctcagacactgtgtctaact
gatgatgacatggtctggtcctggggagacggggactacggcaaactgggacggggcggc
agcgacggctgtaaggttcccatgaagatcgactccctgactggtctgggtgtggttaag
gtggagtgtggatcccagttttccgtggctctgactaagtctggagctgtttacacctgg
ggaaaaggagactaccatcggctgggtcatggttctgacgaccacgttcgacgaccccga
caggtccagggtctgcaggggaagaaggtcactgccatagccacaggctcactgcactgt
gtctgctgcacagaggatggagaggtttacacatggggggacaatgacgagggacagctc
ggggacgggaccaccaacgccatccagaggccgcggctggtggctgcactgcagggtaaa
aaaatcaaccgtgtggcctgtggctctgctcacactctgtcctggtccaccagtaaaccc
accaacgccgggaagctgcccactcaggtaccgatggagtacaaccacctgcaggagatt
cccatcatggctctgaggaaccgcctgctgctgctccatcacatctccgagctcttctgt
ccctgcatccccatgtttgacctggaggggcgactgggacagacgggacacgggccctcg
gtcggcttcgacacgctccgaggaatcctcatctcccaaggaaaggaggcagcgttcagg
aaggtggtccaggccaccatggtgagggaccgacaacatggacctgtggtggagctgaac
aggatccaggtgaaacgttctcgcagtaaaggaggtctggcaggacctgatggaaccaag
tcagtgtttggtcagatgtgttccaagatggcgtccttcagtccagacagtcttctgctg
cctcacagagtgtggaaggtcaagtttgtgggcgagtcagtggacgactgcggcggcggc
tacagcgagtccatcgcagaaatgtgtgaggagctgcagaacgctctgactcctctgctc
atcgtcacccccaatggacgggacgagtctggagccaacagagactgtttcctgctcaac
ccggcggtcaagtcctcgctccacttcagcatgttccgctttctcggagtcctgctggga
atagcgatccggacaggaagtcctctgagtctgaacctggcagaacctgtgtggaaacaa
ctggccgggatgaacctgaccatcgcagacctgagtgaggttgataaagacttcattcct
gggctgatgtacatcagggacaacgaggccacagctgaagagttcgaggccatgactctt
cccttcacggtaccgaacgccagcggtcaagacattcagctcagtgctaagtactcgcac
atcaccctggagaaccgagccgagtacgtccgtctggccatgaactacaggctccacgag
tttgatgaacaggtgtcggccgtacgtgaaggaatggcgcgtgttgttcctgttccgtta
ctgtcacttttcactggatatgagctggaaactatggtgtgcggcagccctgacatcccg
ctccatctgctgaagtctgtagccacatataaaggagtggaaccgatggcgccgctcatc
cagtggttctgggaagtgatggaatcgttttccaacacggaacgttcactgttcctgcgc
ttcgtttggggaagaactcgtctgccccggaccatcgcagacttcagggggcgggacttt
gtcgtccaggtcctggacaagtacaaccctccagaccacttcctgccggagtcgtacacc
tgcttcttcctgctcaaacttcctcggtactcgtgccgacaggtcctggaggagaagctc
aaatacgccattcacttctgcaagtccatcgacacggacgactacgctcgcatcgcgctg
tcaggggagcccgccgccgacgacagcagcgaagactcggacaacgaggacgccgactct
ttcgcctcagattctacgcaggactatctgactggtcactga
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