Comamonas sediminis: ACQYWY_02005
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Entry
ACQYWY_02005 CDS
T11250
Name
(GenBank) cryptochrome/photolyase family protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
csen Comamonas sediminis
Brite
KEGG Orthology (KO) [BR:
csen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csen03400
]
ACQYWY_02005
Enzymes [BR:
csen01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
ACQYWY_02005
DNA repair and recombination proteins [BR:
csen03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
ACQYWY_02005
Prokaryotic type
ACQYWY_02005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
XTV01260
LinkDB
All DBs
Position
441756..443213
Genome browser
AA seq
485 aa
AA seq
DB search
MASRALVWMRRDLRCDDHAALYHALRRFEQVYCVFVFDTDILDLLPTREDRRVDFIHASV
LALDEDLRQLAAGSGTPGAGLLVRHGSAAQEVVQLAQALAVQEVLTNRDYEPEAIARDAR
VAGDLQAAGIVFSDYKDQVLLDRDEVLTQQGHPYSVFTPYKRAWLQKLDAFQCQAYPVAR
YAGHLAALPQGEAIPSLADLGFAPSNLASLKIPAGSRGAQQLLQDFLPRMAVYQEARDFP
AVKGVSYLSVHLRFGTVSIRQLAALAVAQARTGCEGAQTWLSELAWRDFYAMILWHHPQV
VTQSFRPIYDKVQWDDAPELWQAWCEARTGYPLVDAAMRQLLQTGYMHNRLRMVVASFLT
KDLGIDWRAGERFFAQHLNDYDLASNNGGWQWAASTGCDAQPWFRIFNPITQSERFDPDG
KFIRRYLPELAKVPDRYIHFPAAMKPLEQQACGLQLGRDYPQPVVDHGRARERTLMRFHF
MKNPD
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggccagccgcgccctggtatggatgcgccgcgatttgcgctgcgatgaccatgccgct
ctctaccatgccttgcgccgcttcgagcaggtgtattgcgtcttcgtctttgacaccgac
atcctggacctgctgccaacgcgcgaagacaggcgggtggactttatccatgccagcgtg
ctggcgctggatgaggacctgcgccagctggcagcgggcagcggtacgcccggcgcgggc
ttgctggtgcggcatggctcggctgcgcaagaagtggtgcagctggcacaggcactggcc
gtgcaagaggtgctgaccaaccgcgactacgaacccgaggccatcgcccgcgatgcgcgc
gtggccggtgatctgcaggccgccggcattgtgttcagcgattacaaggaccaggtgctg
ctggaccgcgatgaggtgctgacccagcaaggccatccctacagcgtgttcaccccctac
aagcgcgcctggctgcaaaagctcgatgccttccagtgccaggcctacccggtggcgcgc
tatgccgggcatctggcggcgctgccccagggcgaagcgataccgtcgctcgctgatctg
ggttttgcgcccagcaatctggcatcgctcaagatacctgccggcagccggggcgcgcag
cagctgctgcaggattttttgccgcgcatggcggtctaccaggaggcccgggattttccg
gcggtcaagggcgtgtcgtacctgtcggtgcatctgcgcttcggcaccgtgtcgatccgc
caactggccgcgctggccgtggcgcaggcgcgcaccggctgcgagggcgcacagacctgg
ctgtcggagctggcctggcgcgacttctacgcgatgattctctggcaccatccgcaggtg
gtgacccagtcgttccgccctatctacgacaaggtgcagtgggacgatgcgcccgaactg
tggcaggcctggtgcgaggcgcgcaccggctacccgctggtggacgccgcaatgcgccag
ctgctgcagaccggctatatgcataaccgcctgcgcatggtggtggccagctttttgacc
aaggacctgggcattgactggcgcgcgggcgagcgcttttttgcccagcacctcaatgac
tatgacctggcatcgaacaacggcggctggcagtgggcggcctcgaccggctgcgatgcc
cagccctggttccgcatcttcaaccccatcacccagtcggagcgcttcgacccggatggc
aagttcatccgccgctacttgcctgagctggccaaggtgccggaccggtacatccacttt
cctgcggcgatgaagccgctggagcagcaggcctgcggtctgcaactggggcgcgactac
ccgcaaccggtggtggaccacggccgggcgcgtgagcggaccttgatgcggtttcacttc
atgaagaatccggattga
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