Comamonas sediminis: ACQYWY_02770
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Entry
ACQYWY_02770 CDS
T11250
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
csen Comamonas sediminis
Pathway
csen03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ACQYWY_02770 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csen03400
]
ACQYWY_02770 (recC)
Enzymes [BR:
csen01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ACQYWY_02770 (recC)
DNA repair and recombination proteins [BR:
csen03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ACQYWY_02770 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
DUF1737
Motif
Other DBs
NCBI-ProteinID:
XTV01401
LinkDB
All DBs
Position
608362..611955
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AA seq
1197 aa
AA seq
DB search
MQSSPVPAMTPGLMVIHSNHPEALRDLVVAWMQRYPLRPLESETILVQSNGIAQWLKLSM
AQPVAEGGCGITAAVDLQLPAQFLWQAYRAVLGKHEVPEISPLDKQPLTWRLMRLLPGLL
AQPAFAALQRFLAEDHDQRRRFQLAERIADLFDQYQVYRADWLRDWAEGRDQLRSARGDA
KPLEQEQRWQAQLWRSLLDDVGAAGMETSRAAVHQRFVQYWQSPQARHMPGLPRRVVVFG
ISSMPAQTLQALAAMSRSSQVLLCVHNPCRHHWSDIVADKDLLRHQYRRQQRKGSMQGLI
HDDDLHQHAHPLLAAWGKQGRDYIHLIDEFDQPDQYAALLSPVNGGRIDLFGEAEPRHML
AQLQDDILDLRPLAESRALWPAVDPAQDVSIRFQTAHSPQREVEVLHDQLLARLGADPGL
RPRDIIVMVPDIQVYAPHIDAVFGRIARSDARFIPYSLADQSQRGREPMLVALEHVLAMP
ESRFAVSEVLDLLAVDAVRQRFGIDPDDLALLHRWIEGAGVRWGLDAAQRARIGLAQAGE
TNSWRFGLRRMLLGFAVGRGQALDDIQPYDEIGGLDAAALGGLAALLRALEQACSLLDQE
VTPSAWVERARTALELLFDPQQDHEKLLQMQLLQGLERWLGQCEAAGFDEALPLCVAREA
WLAGLDTSSLNQRFMAGAVSFCSLMPMRAIPFRVVCLLGMNDGAYPRPVSVLDFDLMRQQ
YRPGDRSRRDDDRYLLLEAVLSAREQLYISWVGRSIRDSTARPPSVLIGQLRDHLAQGWQ
LAGAPAGLPGPASGQALLRALTQEHPLQPFSPRYFAQPPAQAGSDGLYTYAQEWHGVHGE
GLPTGADEDALEALPEMGLDAALNLRQLQDFAQKPVTAFFRQRLRVFFEDEDLTGQDEEM
FAPDGLQAWSLQAGLLSALEPWVRDNPGAAADAPQLRAQLDAAAQRLRLEGRLPLRAFAD
CALEPACDAALRALQVYAAALRYWPQAGSDALELRYSGGTQGPAVADWLRGLRWTDAAGQ
RHAAKISLSAGRLHAGEQLRYDRLVRAWVEHLAWHNAGQALTTVVCTESGIAVFPALAAG
DARTAWRQLLALWQQGMRAPLPAAVRTSIASLSPAASAGQLASLYDDSYRGTGELQRSAE
LARAFPDFDALLAAGLLDVAQQLYGDMLAHVQLVNGQHPQALARFAEGGAGDGEGPR
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcttcccccgtcccagcgatgacccccggcctgatggtgatacacagcaaccat
ccggaggctctgcgtgacctggtcgtggcctggatgcagcgctacccgctgcggcccctg
gagagcgagacgatcctggtgcagagcaatggcattgcgcagtggctcaagctgtcgatg
gcgcagccggtcgcggaaggaggatgcggcatcactgccgccgtcgatctgcagttgccc
gcgcagtttctgtggcaggcctaccgggcagtgctcggcaagcacgaggtccccgaaatc
tcgccgttggacaagcagccgctgacctggcgcctgatgcgcctgttgcccggtctgctg
gcccagccagcgttcgccgcgctgcagcggtttctcgccgaggaccatgaccagcgccgg
cgcttccaactggccgagcgcatcgccgacctgttcgatcagtaccaggtctaccgcgcc
gactggctgcgcgactgggcggaaggccgtgaccagctgcgcagtgcgcgcggcgatgcg
aaaccgctggagcaggagcagcgctggcaggcacagctgtggcgcagcttgctggacgac
gtgggcgctgccggcatggagaccagccgcgccgccgtgcaccagcgcttcgtgcagtac
tggcagtcgccccaggccaggcacatgcccgggctgccgcgccgggtggtggtatttggc
atttcttcgatgccggcgcagaccttgcaggcgctggctgccatgtcgcgcagcagccag
gtgctgctgtgcgtgcacaacccctgccgccaccattggtcggacatcgttgccgacaag
gatttgctgcgccaccagtaccggcggcaacagcgcaagggcagcatgcaggggctcatc
cacgacgatgacctgcaccagcatgcccacccgctgctggccgcctggggcaagcagggg
cgcgactatatccacctgattgacgaattcgaccagcctgaccagtacgccgcgctgctg
agcccggtcaacggcgggcgcattgatctgtttggcgaggccgagccccgccacatgctg
gcccagttgcaggacgacatcctggacctgcggccgctggccgaaagccgcgcgctgtgg
ccggcggtggacccggcgcaggatgtctccatccgcttccagaccgcgcatagcccgcag
cgcgaggtggaggtgctgcacgaccagttgctcgcccgcctgggcgccgacccgggcctg
cgcccgcgtgacatcatcgtcatggtgcccgacatccaggtctatgcaccgcatatcgat
gcggtgtttggccgcatagcccgcagcgatgcgcgttttattccctattcgctggccgac
cagagccagcgcgggcgcgagccgatgctggttgcgctggagcatgtactggccatgccc
gagagccgctttgccgtcagcgaagtgctcgatctgctggccgtcgatgcggtgcgccag
cgctttggcattgacccggatgatctggcgttgctgcaccgctggattgaaggcgccggt
gtgcgctgggggctggatgccgcgcagcgcgcacgcattggcctggcccaggccggggag
accaacagctggcgcttcggcctgcgccgcatgctgctgggctttgccgtggggcgcggt
caggcgctggacgatatccagccctacgatgagattggcggtctcgatgccgcagcactg
ggtggcctggcggccctgctgcgcgcactggagcaagcctgcagtctgctggaccaggag
gtaacgcccagcgcctgggtggaacgggcacgaacggcgctggagctgctgttcgatcct
cagcaagaccatgaaaaactgctgcagatgcagctgctgcaaggcttggaacgctggctg
ggccaatgcgaggcggcggggtttgacgaagcgttgccgctgtgtgtggcacgcgaggcc
tggctggcaggcctggataccagcagcttgaaccagcgcttcatggcgggggccgtgagt
ttttgcagcctgatgccgatgcgcgcgattccttttcgcgtggtgtgcctgttgggcatg
aacgatggggcctacccgcgtccggtgtcggtgctggactttgacctgatgcgccagcag
taccggcccggtgaccgttcgcgccgcgatgatgaccgctacttgctgctggaggctgtg
ttgtcggcccgcgagcaactctacatcagttgggtagggcgcagcatccgtgacagcacg
gcccgcccgccatcggtgctgatcggccagctgcgcgaccatctggcccagggctggcag
ttggcaggcgcccccgccgggctgcccggccctgcctcggggcaggcgctgctgcgcgcc
ctcacgcaggagcacccgctgcaacccttcagcccgcgctacttcgcacagccccctgcg
caggcgggcagcgatggcctctatacctatgcgcaggagtggcatggtgtgcacggtgaa
ggcctgccgaccggggcagacgaagacgcgttggaggccttgcccgagatggggcttgac
gcagcgctgaacctgcgccaactgcaggactttgcgcaaaagcccgtcaccgcattcttc
cgccagcgcctgcgcgtgttttttgaagacgaggacctgacgggccaggacgaggagatg
tttgccccggacggcctgcaggcctggagcctgcaggcgggcttgctgagcgcgctggag
ccctgggtgcgcgacaaccccggcgcggcggccgatgcgccccagctgcgcgcgcagctc
gatgctgcagcccagcggctgcggctggaagggcggctgccgctgcgcgcctttgccgat
tgcgcgctcgagcctgcctgcgacgcggccctgcgtgcgctgcaggtgtatgcggcagcg
ctgcgctattggccgcaggcgggcagcgatgcgctggagctgcgctacagcggcggcacg
cagggcccggccgtggccgactggctgcgcggtctgcgctggactgatgccgccggccag
cggcatgccgccaagatcagcctgtccgccggccgcttgcatgccggcgagcagctgcgc
tatgaccgcctggtgcgcgcctgggtggagcacctggcctggcacaacgccggccaggcg
ctgacgacggtggtctgcaccgaatcgggcattgcggtgtttcccgcgctggccgctggc
gatgcccggacggcgtggcgccagttgctggcgctgtggcagcaaggcatgcgcgcgccc
ttgccggcagcggttcgtacctccatcgccagcctgtcaccggctgcatcggccgggcag
ctggcgtcgctgtacgacgacagctaccggggcacgggcgagctgcaacgctcggccgag
ctggcccgggcgtttccggattttgatgcgctgctggctgccggtctgctggacgtggcc
cagcagctgtatggcgacatgctcgcccatgtgcaactggtcaatggccagcatccgcag
gcgctggcgcgctttgcagagggtggtgcgggcgatggggaggggccgcgatga
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