Comamonas sediminis: ACQYWY_05130
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Entry
ACQYWY_05130 CDS
T11250
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
csen Comamonas sediminis
Brite
KEGG Orthology (KO) [BR:
csen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csen03016
]
ACQYWY_05130 (truB)
Enzymes [BR:
csen01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ACQYWY_05130 (truB)
Transfer RNA biogenesis [BR:
csen03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ACQYWY_05130 (truB)
Prokaryotic type
ACQYWY_05130 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
XTV01841
LinkDB
All DBs
Position
complement(1139541..1140533)
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AA seq
330 aa
AA seq
DB search
MNASRTRVQRRPVHGVFLLDKPIGLSSNDALQKVKWLLRAEKAGHTGTLDPLATGVLPLC
FGAATKFSQLQLDAPKTYEALVHLGATTTTGDAEGEVLQTWEVDTQALTSENLAAVAARF
TGPISQVPPMYSALKRDGKALYEYARAGITLEREPRAVTILHLTLSRVEEEQAYVALKMT
VRCSKGTYVRTLAEDIGQALGYGAHLRSLRRIETGGIDLSRCISLQTLEATPDAERLQTV
LPVDTLLAAHTRVTLDGDNAGRFLSGLRRRGEWADADAVAVYGEEPPALLGVAHIRAREL
IPDRLLSPVEIQQILEGTPRPQASGILETS
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcctctcgcacacgggtgcagcggcgccctgtgcacggggtgtttctgcttgat
aaacccattggcctgtccagcaacgacgctttgcaaaaagtgaagtggctgctgcgcgcc
gaaaaagcgggccataccggcacgctcgaccctttggccaccggtgtgctgccgctgtgt
tttggcgcggccaccaagttcagccaattgcagttggatgcccccaagacctatgaggcc
ctggtgcacctgggcgccaccaccaccaccggcgatgccgagggagaagtgctgcagacc
tgggaggtggacacacaggcgctgacctccgaaaacctggctgctgtggcggcccggttc
accggacccatcagccaggtgccgccgatgtacagcgcgctcaagcgcgatggcaaggcc
ctctacgaatacgcccgtgccggcatcacgcttgagcgtgagccgcgcgccgtgaccatc
ttgcatctgacgctctcccgcgttgaagaagagcaggcgtatgtcgcgctcaagatgacg
gtgcgctgcagcaagggcacctatgtgcgtacgctggccgaggatattggccaggcgctt
ggctatggcgcgcatctgcgcagcctgcgccgcatagagaccggcgggatcgatctgtcc
cgctgcatcagcctgcaaaccctggaagcgacgcccgacgccgagcgcctgcaaaccgtg
ttgcctgtcgacacgttgcttgcagcgcacacccgtgtcacgctcgatggtgataatgca
ggcagatttttgtccggcttgcgccggcggggtgaatgggccgatgccgatgcagtggcc
gtttatggagaagagcctcctgcgcttttgggtgtggcacacatccgggcgcgcgagctt
attcccgaccgcctcctgagccccgtcgagattcaacaaattttggaaggaacgccgcgc
ccacaagccagcggcattttggaaacatcatga
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