Comamonas sediminis: ACQYWY_05940
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Entry
ACQYWY_05940 CDS
T11250
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
csen Comamonas sediminis
Pathway
csen00260
Glycine, serine and threonine metabolism
csen00460
Cyanoamino acid metabolism
csen00630
Glyoxylate and dicarboxylate metabolism
csen00670
One carbon pool by folate
csen00680
Methane metabolism
csen01100
Metabolic pathways
csen01110
Biosynthesis of secondary metabolites
csen01120
Microbial metabolism in diverse environments
csen01200
Carbon metabolism
csen01230
Biosynthesis of amino acids
csen01240
Biosynthesis of cofactors
csen04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
csen00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
ACQYWY_05940 (glyA)
09102 Energy metabolism
00680 Methane metabolism
ACQYWY_05940 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
ACQYWY_05940 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
ACQYWY_05940 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
ACQYWY_05940 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
ACQYWY_05940 (glyA)
Enzymes [BR:
csen01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
ACQYWY_05940 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
Cys_Met_Meta_PP
Aminotran_5
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
XTV01981
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All DBs
Position
1310401..1311645
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AA seq
414 aa
AA seq
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MYQRNILVEQTDAELFAAIQAENQRQEQHIELIASENYASPAVMWAQGTQLTNKYAEGYP
GKRYYGGCEFVDIAEQLAIDRVKQLFGAEAANVQPHCGASANEAVFLAFLKPGDTIMGMS
LAEGGHLTHGMPLNISGKWFNVVSYGLNAKEELDYDAMEKKAHETKPKLIIAGASAYSLE
IDFARFAKVAKDVGAIFMVDMAHYAGLIAAGEYPNPVPHADVVTTTTHKSLRGPRGGVIL
MKAEHEKAINSAVFPGLQGGPLMHVIAAKAVAFKEALSPEFKTYAQQVKTNARIVAETLT
ERGLRIISGGTQSHVMLVDLRAKGITGKEAEAVLGAAHMTINKNSIPNDPEKPMVTSGIR
IGTPAMTTRGFKDEEARLTANLIADVLDNPRDEANIAAVRAKVNALTARFPVYR
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgtaccaacgcaacatccttgtcgaacagaccgacgcagaactctttgcagccatccag
gccgaaaaccagcgtcaagagcagcacatcgagctgatcgccagcgagaactatgcctcc
cctgccgtgatgtgggcccagggcacccagcttaccaacaagtacgccgaaggctacccc
ggcaagcgctactacggtggctgcgaatttgtcgatatcgccgagcaactggcgatcgac
cgcgtcaagcagctgtttggcgctgaagcggccaacgtgcagccccattgcggcgcctcc
gccaacgaggcagtcttcctcgccttcctcaagcccggcgacaccatcatgggcatgagc
ctggccgaaggcggtcacctgacccacggcatgccgctgaacatctccggcaagtggttc
aacgtcgtctcctacggcctgaacgcgaaggaagagctggactacgacgccatggaaaag
aaggcgcacgagaccaagcccaagctgatcatcgccggtgcatcggcctactcgctggaa
atcgacttcgcccgctttgccaaggtggccaaggatgtcggcgcgatcttcatggtggac
atggcccactatgccggtctgatcgccgcaggcgagtaccccaaccccgtgccccacgct
gatgtggtgacgaccaccacccacaagagcctgcgtggcccacgtggcggcgtcatcctg
atgaaggccgagcacgaaaaggccatcaactcggccgtgttccccggcctgcaaggcggc
ccgctgatgcatgtgatcgctgccaaggctgtggctttcaaggaagcgctgtcgcccgag
ttcaagacctatgcccagcaggtcaagaccaacgcccgcatcgtggccgagaccctgacc
gagcgcggcctgcgcatcatctccggtggcacgcaaagccacgtgatgctggtggacctg
cgcgccaagggcatcaccggcaaggaagccgaagccgtgctgggcgctgcccacatgacg
atcaacaagaactccatccccaacgacccggaaaagccgatggtcaccagcggcatccgt
atcggtacgcctgcgatgaccacccgtggcttcaaggacgaagaagcgcgcctgaccgcc
aacctgatcgccgacgtgctggacaacccccgtgacgaggccaatatcgctgccgtgcgc
gcaaaggtcaatgccctgaccgcacgtttccccgtctaccgttga
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