Comamonas sediminis: ACQYWY_06195
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Entry
ACQYWY_06195 CDS
T11250
Name
(GenBank) TonB-dependent siderophore receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
csen Comamonas sediminis
Brite
KEGG Orthology (KO) [BR:
csen00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csen02000
]
ACQYWY_06195
Transporters [BR:
csen02000
]
Other transporters
Pores ion channels [TC:
1
]
ACQYWY_06195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
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Motif
Other DBs
NCBI-ProteinID:
XTV02027
LinkDB
All DBs
Position
1367814..1369985
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AA seq
723 aa
AA seq
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MTLSRTSARSVSIHPLSCFSAIPLAISLAIAAWPAAAQTAPDAAAPAPAAEAVLPQVIVQ
EKAQEVGYQPKRATTATRSDAALRDVPQAIAVVPAQVLQDQQVRSIDEALYNVSGITQAN
TLGGTQDAVIKRGFGFNRDGSILRDGIRTVLARNLTFTTERVEVLKGPSSVLYGTMDPGG
VINMVTKKPQLSFAGQVGASLSSYGGGGASVDLTGPLGEQGLAYRFIADTSDVDYWRNFG
KNRQTVIAPSLAWYGRDTYVRMSYEHTDYEQPFDRGTVIDSRTGRPVATDRRERFDEAYN
RTLGDSDFFTVQAQHRLNTQWKLNAAYSYNRNGYDDYQARPVSLNPTTGILTRRPDGTRG
ALSQQHVGQINLEGKLQAGGMAHEILAGLDAEDSNIFRRDIIRGSNSGGFNVHDPVYGNL
PNATSIDEAQSAQSDKIRQQALFAQDSIRLSPQWLLQLAGRWQHYDQIAGKGRPFVVGSE
SDGSKFVPRAGLVWQPSSEWSIYGSYSESFKPQSSIGNVIGTLPPETAKAWELGTKWESP
AGITTTAALYDIRKRNVVVSETIDGQSYARAVGGARSRGLELDAAGRLGKQWQLIGTYAY
TDAAVTDDPQYQDNRLANVARHTASLFAAYDFAASSSGRWRAGAGLRHVGRRAGDAANSF
NNAGYTVADSFVSWERPWSGRIVKLQLNIKNLFDKNYVSSSGSPIYVSLGERRQALLRAV
VDF
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgaccctttcccgcacctccgcccgctccgtttccatccacccgctgagctgcttcagc
gccatcccgctggcgatctcgctggccatcgccgcctggcctgcagccgcccaaaccgcg
cccgatgccgccgcccccgccccggccgccgaagccgtgctgccccaggtcatcgtgcaa
gaaaaagcgcaggaagtgggctaccagcccaagcgtgcaaccacggccacccgcagcgat
gccgcgctgcgcgacgtgccccaggccattgccgtggtgcccgcccaggtgctgcaggac
cagcaggtgcgctccatcgacgaggcgctctacaacgtcagcggcatcacccaggccaac
accctgggcggcacgcaggatgcggtgatcaagcgcggctttggcttcaaccgcgatggt
tccatcctgcgcgatggcatccgcaccgtgctggcccgcaacctcaccttcacgaccgag
cgggtcgaggtgctcaagggccccagctcggtgctctacggcacgatggacccgggcggc
gtgatcaacatggtcaccaaaaagccccagctcagctttgccggccaggtgggcgcctcg
ctgtcgagctacggcggcggcggtgcctcggttgacctgaccggccccctcggcgagcaa
ggcctggcctaccgcttcatcgccgacaccagcgatgtcgactactggcgcaacttcggc
aagaaccgccagaccgtcatcgccccatcgctggcctggtatgggcgcgacacctatgtg
cgcatgtcctacgagcacaccgactacgagcagccctttgaccggggcaccgtgatcgac
agccgcaccggccgcccggtggccaccgaccgccgcgagcgctttgacgaggcctacaac
cgcaccctgggcgattcggacttcttcaccgtgcaggcccagcaccgcctgaacacgcag
tggaagctcaatgccgcctacagctacaaccgcaacggctatgacgactaccaggcccgg
ccggtatcgctcaaccccacgaccggcatcctcacgcgccgccctgatggcacgcgcggc
gcgctcagccagcagcatgtgggccagatcaacctcgaaggcaagctgcaggcgggcggc
atggcgcacgagatcctcgctggcctggacgccgaggacagcaatatcttccgccgcgac
atcatccggggcagcaacagcggcggcttcaatgtccacgacccggtctacggcaacctg
cccaacgccaccagcatcgacgaagcgcaaagcgcccagagcgacaagatccgccagcag
gcgctgtttgcgcaggattcgatccgcctgtcgccgcagtggctgctgcagctggccggg
cgctggcagcactatgaccagatagcaggcaagggccggccgtttgtggtgggcagcgaa
tcggatggcagcaagtttgtgccgcgcgccggcctggtctggcagcccagtagcgaatgg
tccatctacggcagctacagcgaatccttcaagccgcaaagcagcattggcaatgtcatt
ggtaccttgccgcccgagaccgccaaggcctgggagctgggcaccaagtgggagtcgcct
gccggcatcaccaccactgcggcgctctacgacatccgcaagcgcaacgtggtggtcagc
gagaccatcgacggccaaagctatgcccgcgccgtcggcggtgcccgctcgcgcggcctg
gagctcgatgccgccggccgcctgggcaagcagtggcagctgattggcacctatgcctac
accgatgccgccgtcaccgacgacccgcaataccaggacaaccgcctggccaatgtggcc
cgccacaccgcctcgctctttgccgcctatgattttgccgccagcagcagtggccgctgg
cgtgccggcgccggcctgcgccatgtgggccgccgcgcgggcgatgcggccaacagcttc
aacaacgccggctacacggtggccgacagctttgtgagctgggagcgcccctggagcggc
cgcatcgtcaagctgcagctcaacatcaagaacctgttcgacaagaactatgtcagctcc
tcgggcagccccatctatgtgtcactcggcgagcgccgccaggccctgctgcgcgccgtc
gtcgatttctga
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