Comamonas sediminis: ACQYWY_06630
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Entry
ACQYWY_06630 CDS
T11250
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
csen Comamonas sediminis
Pathway
csen02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
csen00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ACQYWY_06630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csen03021
]
ACQYWY_06630
Transcription machinery [BR:
csen03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ACQYWY_06630
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
TetR_C_6
PhyR_sigma-like
DUF6031
HTH_20
HTH_40
HTH_SB
Motif
Other DBs
NCBI-ProteinID:
XTV02107
LinkDB
All DBs
Position
complement(1472719..1473222)
Genome browser
AA seq
167 aa
AA seq
DB search
MASPGYLASPIEALYKNHHAWLQSWLRRRLGHAGDAADLAHDTFLRLMLSPRNVDAADEP
RAFLTHVAKGLVVDLWRRREIERAYLETLQALPEPHAPSPETQLQVIEALVQIDRLLAGL
APRTRQVFLLAQLDGLSLQQISDQVAMPVITVRRHIHKALLRCLEAA
NT seq
504 nt
NT seq
+upstream
nt +downstream
nt
atggcatctcccggatacttggcttcgcccatcgaagcgctctacaaaaaccaccatgcc
tggctgcagtcctggctgcggcgccgtctgggccatgcgggcgatgcggccgatctggcc
cacgacacctttttgcggctcatgctgtcaccccgcaacgtggacgcagccgatgagccg
cgggccttcctgacccatgtcgccaaaggcctggtggtggatttatggcgccggcgcgag
atcgagcgcgcctacctggagaccctgcaggccctgcccgagccgcatgcgccatcgccc
gagacccagctgcaggtcatcgaggccttggtgcagatcgaccggctgctggcaggcctg
gcgccccgcacgcgccaggtgtttttgctggcgcagctcgatggcctgagcttgcagcag
atctccgaccaggtcgccatgccggtgatcaccgtgcgccgccatatccacaaggccttg
ctgcgctgcctggaggccgcgtga
DBGET
integrated database retrieval system
